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The map label for this gene is yebA [H]

Identifier: 167040748

GI number: 167040748

Start: 2131114

End: 2131863

Strand: Reverse

Name: yebA [H]

Synonym: Teth514_2125

Alternate gene names: 167040748

Gene position: 2131863-2131114 (Counterclockwise)

Preceding gene: 167040749

Following gene: 167040747

Centisome position: 86.76

GC content: 34.27

Gene sequence:

>750_bases
ATGAAATACCAACGAATTCCTTATTATTTTCCCAAAAAATTTAGTACTTACAAAAAGTATACAGAGCTGTTTGAAAATCA
ATTAATTATATCATTAATTTTACTAGGAATGATTTTACTTTTTAAAGCAGTTGACGTGCCTATAGCCAACTCTTTTATAA
ATGCTACTAAAAGTGTGCTAAGTTATGATATGAATTACGAAAACACAAAGAAAGGTTTAAAATTAGTTCAAAGTAAGATT
CCTTGGCTCAAAGAGAGTGTGATAAAAGTTTTTTCTCCTACTGAAGAAAAAACTTCAGAAAATAAAACTTCTTCTGAGGT
TTCTCAGGCTTTTATCAAAATGATTGCACCTATTAGTGGAAAGGTAACCTCTGGCTTTGGAATGAGGATTGATCCCATTA
CAAATCAATTGACAAATCATACTGGTATTGATATAGATGCTCCTATTGGAATAGAAGTGAAAGCAGCATTAGATGGGGTA
GTAATGTTAGTGGATGAGCAAAACCAGGATTTTGGAAAAGTCATAGTTTTAAGGCATGCTAATGATGTAAGGACCGTATA
TGCTCATTTATCAGAAATTTTAGTGAAAGAAGGAGACCAAGTAAAACAAGGGGATATAATTGGAAAGACAGGCGATACTG
GAAAAGCCACTGCTCCTCACTTGCATTTTGAAGTTTGGGAAAATGGCAAGCCAGTAGACCCCTTGACAAAGGTTGTTATA
GGGGATGTTGCCAGTGAAGGCGCAAAATGA

Upstream 100 bases:

>100_bases
AAGGACTTTTAGAGTGGAGAGAAATAGAAGATAAATAAAATAATTTATCATAATAATGCCTCCTTCAAAATAAAATGTAA
CATAGAAGGAGGCATATATC

Downstream 100 bases:

>100_bases
AATTTAGACGGATCGAAGTAAAAATACATTTTTCTACTTTTGTATTTGCATTACTTTTAATTGCGACGGGATTTATAAAA
GAATTAATTGCTATTTTTGC

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKYQRIPYYFPKKFSTYKKYTELFENQLIISLILLGMILLFKAVDVPIANSFINATKSVLSYDMNYENTKKGLKLVQSKI
PWLKESVIKVFSPTEEKTSENKTSSEVSQAFIKMIAPISGKVTSGFGMRIDPITNQLTNHTGIDIDAPIGIEVKAALDGV
VMLVDEQNQDFGKVIVLRHANDVRTVYAHLSEILVKEGDQVKQGDIIGKTGDTGKATAPHLHFEVWENGKPVDPLTKVVI
GDVASEGAK

Sequences:

>Translated_249_residues
MKYQRIPYYFPKKFSTYKKYTELFENQLIISLILLGMILLFKAVDVPIANSFINATKSVLSYDMNYENTKKGLKLVQSKI
PWLKESVIKVFSPTEEKTSENKTSSEVSQAFIKMIAPISGKVTSGFGMRIDPITNQLTNHTGIDIDAPIGIEVKAALDGV
VMLVDEQNQDFGKVIVLRHANDVRTVYAHLSEILVKEGDQVKQGDIIGKTGDTGKATAPHLHFEVWENGKPVDPLTKVVI
GDVASEGAK
>Mature_249_residues
MKYQRIPYYFPKKFSTYKKYTELFENQLIISLILLGMILLFKAVDVPIANSFINATKSVLSYDMNYENTKKGLKLVQSKI
PWLKESVIKVFSPTEEKTSENKTSSEVSQAFIKMIAPISGKVTSGFGMRIDPITNQLTNHTGIDIDAPIGIEVKAALDGV
VMLVDEQNQDFGKVIVLRHANDVRTVYAHLSEILVKEGDQVKQGDIIGKTGDTGKATAPHLHFEVWENGKPVDPLTKVVI
GDVASEGAK

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=137, Percent_Identity=35.7664233576642, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082174, Length=119, Percent_Identity=36.1344537815126, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=34.453781512605, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI87082297, Length=157, Percent_Identity=32.484076433121, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 27631; Mature: 27631

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYQRIPYYFPKKFSTYKKYTELFENQLIISLILLGMILLFKAVDVPIANSFINATKSVL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SYDMNYENTKKGLKLVQSKIPWLKESVIKVFSPTEEKTSENKTSSEVSQAFIKMIAPISG
HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCC
KVTSGFGMRIDPITNQLTNHTGIDIDAPIGIEVKAALDGVVMLVDEQNQDFGKVIVLRHA
CEECCCCCEECHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEECC
NDVRTVYAHLSEILVKEGDQVKQGDIIGKTGDTGKATAPHLHFEVWENGKPVDPLTKVVI
CHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
GDVASEGAK
HHHHCCCCC
>Mature Secondary Structure
MKYQRIPYYFPKKFSTYKKYTELFENQLIISLILLGMILLFKAVDVPIANSFINATKSVL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SYDMNYENTKKGLKLVQSKIPWLKESVIKVFSPTEEKTSENKTSSEVSQAFIKMIAPISG
HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCC
KVTSGFGMRIDPITNQLTNHTGIDIDAPIGIEVKAALDGVVMLVDEQNQDFGKVIVLRHA
CEECCCCCEECHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEECC
NDVRTVYAHLSEILVKEGDQVKQGDIIGKTGDTGKATAPHLHFEVWENGKPVDPLTKVVI
CHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
GDVASEGAK
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]