| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is metI [H]
Identifier: 167040407
GI number: 167040407
Start: 1773969
End: 1774622
Strand: Direct
Name: metI [H]
Synonym: Teth514_1770
Alternate gene names: 167040407
Gene position: 1773969-1774622 (Clockwise)
Preceding gene: 167040406
Following gene: 167040408
Centisome position: 72.19
GC content: 42.81
Gene sequence:
>654_bases ATGTCTGAAACTATAAACTTGTTGCTGGTTGCCACATGGCAAACTATTTACATGGTGGCGGTGTCAACGTTCATAGCAAC GATTTTCGGGGTACCCCTCGGAATCCTGCTGATGGTAACCGACAGGAATCAGATACTGCAAAACGAACTTTTAAACAAAA TACTAGGCACTATTGTAAATATTTTTCGCTCTGTGCCTTTTGTAATACTTTTAATCGTGCTTATACCTTTTACACGATTG CTTGTAGGGAAAGCTATAGGGACCACCGCAGCGATTGTTCCCCTTTCGGTAGCGGCTATTCCCTTTATGGGAAGGCTTAC CGAAACAGCATTAAGAGAGGTAGACCGCGGTATCATTGAAGCAGCCCAGTCTATGGGAGCTTCACCCCTTCAAATCATAA CCAAGGTGCTAGTCCCCGAGGCTTTACCTTCAATAGCCGCAGGGATTACCATAACTACTATAAATTTAGTGGGATATTCT GCCATGGCAGGTGTTATAGGAGGTGGTGGGCTAGGAGATTTAGCAGTAAGATATGGATATCAGCGATTTATGCTCGACAT TATGCTTTATACCGTAGCAATTTTGGTAGCTATGGTACAGCTAATTCAACTCATAGGAGATGTACTAGTAAAACAGCTGT CAAAAAATCGGTAA
Upstream 100 bases:
>100_bases TACGGTACTCTTATAGTTGAGCTAAGAGGCAAAAACGGTGAAACAGACGCTGCTTTAAAATATCTAAAAGATTTGGGACT CGACGTGGAGGTGATTGAAA
Downstream 100 bases:
>100_bases ATTTTACTTTTTTAATAAAGGAGGAGATTGATGTGAAAAAGTTCTTAACTACACTTTTATTACTGAGCCTTCTAACAATT TTTATTGCGGGATGCGGAAC
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSETINLLLVATWQTIYMVAVSTFIATIFGVPLGILLMVTDRNQILQNELLNKILGTIVNIFRSVPFVILLIVLIPFTRL LVGKAIGTTAAIVPLSVAAIPFMGRLTETALREVDRGIIEAAQSMGASPLQIITKVLVPEALPSIAAGITITTINLVGYS AMAGVIGGGGLGDLAVRYGYQRFMLDIMLYTVAILVAMVQLIQLIGDVLVKQLSKNR
Sequences:
>Translated_217_residues MSETINLLLVATWQTIYMVAVSTFIATIFGVPLGILLMVTDRNQILQNELLNKILGTIVNIFRSVPFVILLIVLIPFTRL LVGKAIGTTAAIVPLSVAAIPFMGRLTETALREVDRGIIEAAQSMGASPLQIITKVLVPEALPSIAAGITITTINLVGYS AMAGVIGGGGLGDLAVRYGYQRFMLDIMLYTVAILVAMVQLIQLIGDVLVKQLSKNR >Mature_216_residues SETINLLLVATWQTIYMVAVSTFIATIFGVPLGILLMVTDRNQILQNELLNKILGTIVNIFRSVPFVILLIVLIPFTRLL VGKAIGTTAAIVPLSVAAIPFMGRLTETALREVDRGIIEAAQSMGASPLQIITKVLVPEALPSIAAGITITTINLVGYSA MAGVIGGGGLGDLAVRYGYQRFMLDIMLYTVAILVAMVQLIQLIGDVLVKQLSKNR
Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786397, Length=217, Percent_Identity=49.3087557603687, Blast_Score=173, Evalue=8e-45, Organism=Escherichia coli, GI1789033, Length=166, Percent_Identity=32.5301204819277, Blast_Score=60, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23265; Mature: 23133
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00065 D_2_HYDROXYACID_DH_1 ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETINLLLVATWQTIYMVAVSTFIATIFGVPLGILLMVTDRNQILQNELLNKILGTIVN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHH IFRSVPFVILLIVLIPFTRLLVGKAIGTTAAIVPLSVAAIPFMGRLTETALREVDRGIIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQSMGASPLQIITKVLVPEALPSIAAGITITTINLVGYSAMAGVIGGGGLGDLAVRYGY HHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QRFMLDIMLYTVAILVAMVQLIQLIGDVLVKQLSKNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SETINLLLVATWQTIYMVAVSTFIATIFGVPLGILLMVTDRNQILQNELLNKILGTIVN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHH IFRSVPFVILLIVLIPFTRLLVGKAIGTTAAIVPLSVAAIPFMGRLTETALREVDRGIIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQSMGASPLQIITKVLVPEALPSIAAGITITTINLVGYSAMAGVIGGGGLGDLAVRYGY HHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QRFMLDIMLYTVAILVAMVQLIQLIGDVLVKQLSKNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]