Click here to switch to the map view.

The map label for this gene is tpn32 [H]

Identifier: 167040408

GI number: 167040408

Start: 1774655

End: 1775491

Strand: Direct

Name: tpn32 [H]

Synonym: Teth514_1771

Alternate gene names: 167040408

Gene position: 1774655-1775491 (Clockwise)

Preceding gene: 167040407

Following gene: 167040409

Centisome position: 72.22

GC content: 40.86

Gene sequence:

>837_bases
GTGAAAAAGTTCTTAACTACACTTTTATTACTGAGCCTTCTAACAATTTTTATTGCGGGATGCGGAACAAAACAAGGACC
CACTTCCGACAAACAAACCCAAAACCAGGGCGTATCAAAAACAACCATCAAAGTAGGAGCTACTCCAGTGCCCCACGCCC
AAATTTTAAACGTCGTAAAACCCCTCCTCGAAAAAGAGGGAATTACTCTAGAGATTGTAGAGTTCACAGATTACGTGCAA
CCCAACCTAAAGCTAGCTGAAAAAGAATTAGATGCTAACTATTTCCAGCACATCCCTTATCTTGAAGATTTCTCAAAGGA
GCATAATCTTGATTTAACATATATTGCTAAAGTTCATATCGAACCCATGGGTATATACTCCCAAAAAATCAAAAACCTCA
GTGAGTTAAAAGAAGGCGCTACCATTGCCATACCCAACGACGCTACCAATGGCGGAAGAGCTTTGCTACTGCTGCAATCA
GCTGGAGTAATAAAATTAAAACCAGATGCAGGTATTAAAGCAACAGTAAATGACATTGTCGAAAATCCTAAAAAAATTAA
GATTTCCGAGCTGGAAGCCGCTACTCTGCCAAGGGTACTGTCAGATGTAGACGCAGCGGTAATAAACACCAACTACGCCT
TGGAAGCTGGACTTATACCCACTAAGGATGCTCTCTTTATCGAATCAGCAAATTCCCCTTATGTCAATGTACTGGTGGTC
CGCAAAGGCGATGAATCTAGGCCTGAACTTAAGAAGTTAGCCGAAGCCTTAAATTCTCCAGAAGTTAAAAAATTCATTGA
GGAAACATATAAAGGTGCTGTCGTACCCGCCTTTTAA

Upstream 100 bases:

>100_bases
TAGCTATGGTACAGCTAATTCAACTCATAGGAGATGTACTAGTAAAACAGCTGTCAAAAAATCGGTAAATTTTACTTTTT
TAATAAAGGAGGAGATTGAT

Downstream 100 bases:

>100_bases
GCAGGAGGTGATTTTATTGTCAGAATCTGATAAAACTATCGGTGTCATCGCTGGTACACCAGTAGATACTCAGATGGGAG
TCGATTTTATAAGAAAAAAG

Product: YaeC family lipoprotein

Products: NA

Alternate protein names: 29 kDa protein [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKKFLTTLLLLSLLTIFIAGCGTKQGPTSDKQTQNQGVSKTTIKVGATPVPHAQILNVVKPLLEKEGITLEIVEFTDYVQ
PNLKLAEKELDANYFQHIPYLEDFSKEHNLDLTYIAKVHIEPMGIYSQKIKNLSELKEGATIAIPNDATNGGRALLLLQS
AGVIKLKPDAGIKATVNDIVENPKKIKISELEAATLPRVLSDVDAAVINTNYALEAGLIPTKDALFIESANSPYVNVLVV
RKGDESRPELKKLAEALNSPEVKKFIEETYKGAVVPAF

Sequences:

>Translated_278_residues
MKKFLTTLLLLSLLTIFIAGCGTKQGPTSDKQTQNQGVSKTTIKVGATPVPHAQILNVVKPLLEKEGITLEIVEFTDYVQ
PNLKLAEKELDANYFQHIPYLEDFSKEHNLDLTYIAKVHIEPMGIYSQKIKNLSELKEGATIAIPNDATNGGRALLLLQS
AGVIKLKPDAGIKATVNDIVENPKKIKISELEAATLPRVLSDVDAAVINTNYALEAGLIPTKDALFIESANSPYVNVLVV
RKGDESRPELKKLAEALNSPEVKKFIEETYKGAVVPAF
>Mature_278_residues
MKKFLTTLLLLSLLTIFIAGCGTKQGPTSDKQTQNQGVSKTTIKVGATPVPHAQILNVVKPLLEKEGITLEIVEFTDYVQ
PNLKLAEKELDANYFQHIPYLEDFSKEHNLDLTYIAKVHIEPMGIYSQKIKNLSELKEGATIAIPNDATNGGRALLLLQS
AGVIKLKPDAGIKATVNDIVENPKKIKISELEAATLPRVLSDVDAAVINTNYALEAGLIPTKDALFIESANSPYVNVLVV
RKGDESRPELKKLAEALNSPEVKKFIEETYKGAVVPAF

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=280, Percent_Identity=40.7142857142857, Blast_Score=197, Evalue=8e-52,
Organism=Escherichia coli, GI1790093, Length=239, Percent_Identity=44.3514644351464, Blast_Score=196, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 30374; Mature: 30374

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLTTLLLLSLLTIFIAGCGTKQGPTSDKQTQNQGVSKTTIKVGATPVPHAQILNVVK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHH
PLLEKEGITLEIVEFTDYVQPNLKLAEKELDANYFQHIPYLEDFSKEHNLDLTYIAKVHI
HHHHHCCCEEEEEECHHHCCCCHHHHHHHHCHHHHHHCCCHHHHHHHCCCCEEEEEEEEE
EPMGIYSQKIKNLSELKEGATIAIPNDATNGGRALLLLQSAGVIKLKPDAGIKATVNDIV
CCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHH
ENPKKIKISELEAATLPRVLSDVDAAVINTNYALEAGLIPTKDALFIESANSPYVNVLVV
CCCCEEEEHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCEEEEECCCCCEEEEEEE
RKGDESRPELKKLAEALNSPEVKKFIEETYKGAVVPAF
ECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKFLTTLLLLSLLTIFIAGCGTKQGPTSDKQTQNQGVSKTTIKVGATPVPHAQILNVVK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHH
PLLEKEGITLEIVEFTDYVQPNLKLAEKELDANYFQHIPYLEDFSKEHNLDLTYIAKVHI
HHHHHCCCEEEEEECHHHCCCCHHHHHHHHCHHHHHHCCCHHHHHHHCCCCEEEEEEEEE
EPMGIYSQKIKNLSELKEGATIAIPNDATNGGRALLLLQSAGVIKLKPDAGIKATVNDIV
CCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHH
ENPKKIKISELEAATLPRVLSDVDAAVINTNYALEAGLIPTKDALFIESANSPYVNVLVV
CCCCEEEEHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCEEEEECCCCCEEEEEEE
RKGDESRPELKKLAEALNSPEVKKFIEETYKGAVVPAF
ECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]