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The map label for this gene is ylbH [H]

Identifier: 167040374

GI number: 167040374

Start: 1742812

End: 1743372

Strand: Reverse

Name: ylbH [H]

Synonym: Teth514_1737

Alternate gene names: 167040374

Gene position: 1743372-1742812 (Counterclockwise)

Preceding gene: 167040375

Following gene: 167040373

Centisome position: 70.95

GC content: 30.48

Gene sequence:

>561_bases
ATGTCTTTGAGAGTGATAGCAGGTAAGTTAAAGGGAAGAAAGGTAAAATCTTTAGAAGGCAATGAAGTGCGTCCAACTGC
CGATAGAGTTAAAGAATCCCTGTTTAATATATTGATGAACAAAATAGAAGGAAGTATTTTTTTGGATTTATTTGCGGGTA
CAGGAAATATAGGCATCGAGGCATTAAGCAGAGGGGCACAGTTTTGCTATTTTGTAGATAAAAGTTTAAAAAGCATAAAA
TGCATAAGGGAGAATGTAACTGAATTAAATTTAGTACCTTTTGCTAAAATACTTCATCGAGATGTTTTAAAAGTTATCGA
AATGTTAGACAAAAATAATACAAAGTTTGATATAATATTTTTAGATCCCCCTTATTATCAAAACCTTGTTGACAAAACTC
TTATAAAGCTTGGAGAGGCTAAAGTTTTAAAGGAAGATGGCATTGTAATAGCAGAACACCATAAAAATGATAAAGTAAGA
GAAATGTATGGAAATTTAGTAAAGATAAGAGAAAATAAATATGGGGAGACAATATTATCATTTTATAAGGAGGAAATATG
A

Upstream 100 bases:

>100_bases
CTGTTCCCATAAATATTATTTGCCATTTTGAAAAAATTTTATACATATTTTTTGCGATATTTTTAAAAAATATGCTAAAA
TAATTGTTGAAGTGGGGGTA

Downstream 100 bases:

>100_bases
AAACTGCAATTTATCCAGGGAGTTTTGATCCAGTTACCTATGGACACATTGATATTATAGAAAGAGGAGCAAATCTGTTT
GATAAGCTGATTGTAGCTGT

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSLRVIAGKLKGRKVKSLEGNEVRPTADRVKESLFNILMNKIEGSIFLDLFAGTGNIGIEALSRGAQFCYFVDKSLKSIK
CIRENVTELNLVPFAKILHRDVLKVIEMLDKNNTKFDIIFLDPPYYQNLVDKTLIKLGEAKVLKEDGIVIAEHHKNDKVR
EMYGNLVKIRENKYGETILSFYKEEI

Sequences:

>Translated_186_residues
MSLRVIAGKLKGRKVKSLEGNEVRPTADRVKESLFNILMNKIEGSIFLDLFAGTGNIGIEALSRGAQFCYFVDKSLKSIK
CIRENVTELNLVPFAKILHRDVLKVIEMLDKNNTKFDIIFLDPPYYQNLVDKTLIKLGEAKVLKEDGIVIAEHHKNDKVR
EMYGNLVKIRENKYGETILSFYKEEI
>Mature_185_residues
SLRVIAGKLKGRKVKSLEGNEVRPTADRVKESLFNILMNKIEGSIFLDLFAGTGNIGIEALSRGAQFCYFVDKSLKSIKC
IRENVTELNLVPFAKILHRDVLKVIEMLDKNNTKFDIIFLDPPYYQNLVDKTLIKLGEAKVLKEDGIVIAEHHKNDKVRE
MYGNLVKIRENKYGETILSFYKEEI

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=183, Percent_Identity=28.4153005464481, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 21278; Mature: 21147

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRVIAGKLKGRKVKSLEGNEVRPTADRVKESLFNILMNKIEGSIFLDLFAGTGNIGIE
CCCEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHH
ALSRGAQFCYFVDKSLKSIKCIRENVTELNLVPFAKILHRDVLKVIEMLDKNNTKFDIIF
HHHCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
LDPPYYQNLVDKTLIKLGEAKVLKEDGIVIAEHHKNDKVREMYGNLVKIRENKYGETILS
ECCHHHHHHHHHHHHHHCCHHEECCCCEEEEECCCCCHHHHHHCCCEEECCCCHHHHHHH
FYKEEI
HHHHCC
>Mature Secondary Structure 
SLRVIAGKLKGRKVKSLEGNEVRPTADRVKESLFNILMNKIEGSIFLDLFAGTGNIGIE
CCEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHH
ALSRGAQFCYFVDKSLKSIKCIRENVTELNLVPFAKILHRDVLKVIEMLDKNNTKFDIIF
HHHCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
LDPPYYQNLVDKTLIKLGEAKVLKEDGIVIAEHHKNDKVREMYGNLVKIRENKYGETILS
ECCHHHHHHHHHHHHHHCCHHEECCCCEEEEECCCCCHHHHHHCCCEEECCCCHHHHHHH
FYKEEI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]