| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is yaeL [C]
Identifier: 167040290
GI number: 167040290
Start: 1671828
End: 1672826
Strand: Reverse
Name: yaeL [C]
Synonym: Teth514_1653
Alternate gene names: 167040290
Gene position: 1672826-1671828 (Counterclockwise)
Preceding gene: 167040291
Following gene: 167040289
Centisome position: 68.08
GC content: 34.63
Gene sequence:
>999_bases TTGACAATTTTGATAAGTATAATTGTTTTAAGCGTTTTAGTAATGTTTCACGAATTTGGACATTTTATCGTTGCAAAACT TTCTGGAGCTAGAGTAAATGAATTTTCTATTGGCTTTGGTCCACGACTTTTTAAAAAGAAATACGGAGAAACAGAGTATT CTTTTAGAGCATTGCTATTCGGTGGTTATGTTGCTTTAGAAGGTGAAGATGAAAAATCTAGTGACCCGCGGGCTATAGTA AATAAGCCTTGGCCTGTAAGGTTGGCTGTCTTTGCTGCAGGTCCTTTAATGAATATATTATTAGCTTTTTTATTGCTTTT TATTGTATTTTTTAATATAGGAAGTCCGATACCACAGGTAAAATCCGTAATGGAAGGCTATCCCGCTGAAAAAGCAGGAA TTGTGCCGGGGGACAAAATTGTAATGGTAAATAATACAAAGATAAATACATGGGAGGAGTTAGAGAAAGCCATAAGTTCT AATGGAGAGCGAGTATTGACAATTGAAATTCAAAGGGGAAATCAAATTTTACAAAAACAAGTAAAACCAATTTTTGATAA AAACGCTTCAAAGGTAATGATAGGAATTGTTCCAGACTATGAGCGTTCTATCTCTCTTGCCTTTAAAACTGCCATCAATC AGACAATATATTTTTCGAAACTTATTATTTTGTCTCTTGTAATGTTAGTAACCGGAAAAGTCTCTGTCAATGATATTATG GGACCTGTGGGAATTGTTCAAGCTGTTGGAACAGTCGCTAAAACAGGTGTTATAAATTTACTAGCTTTTTCCGCTCTTAT AAGCGTAAATTTAGGCCTTTTTAATCTATTGCCACTACCGGCTTTAGACGGTGGAAGGATTTTGTTTGTGTTAGCAGAGG CAGTAAGAGGTAAACCATTGCCACCTGAAAAAGAAGGCTATATTCATTATTTAGGTTTTTTACTGTTGATTGCTTTGTTG ATTTTTGCAACCTATAGGGATATTCTACGCATTTTTTAA
Upstream 100 bases:
>100_bases AGAACATAATAATATACAAAATCCAACTTTAGATGATATAATAAATGTGGATGAAGAGGTTAAGGAAAAAATAGCAAAAA AATATATGAGGTGATACATT
Downstream 100 bases:
>100_bases AAGGTGATAAAAATGAGAAAAATTACTCGCGAAGTCAAAATAGGCAATAAAAAAATTGGAGGAAATAATCCAATTTTAGT TCAGTCTATGACTAACACGG
Product: putative membrane-associated zinc metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTILISIIVLSVLVMFHEFGHFIVAKLSGARVNEFSIGFGPRLFKKKYGETEYSFRALLFGGYVALEGEDEKSSDPRAIV NKPWPVRLAVFAAGPLMNILLAFLLLFIVFFNIGSPIPQVKSVMEGYPAEKAGIVPGDKIVMVNNTKINTWEELEKAISS NGERVLTIEIQRGNQILQKQVKPIFDKNASKVMIGIVPDYERSISLAFKTAINQTIYFSKLIILSLVMLVTGKVSVNDIM GPVGIVQAVGTVAKTGVINLLAFSALISVNLGLFNLLPLPALDGGRILFVLAEAVRGKPLPPEKEGYIHYLGFLLLIALL IFATYRDILRIF
Sequences:
>Translated_332_residues MTILISIIVLSVLVMFHEFGHFIVAKLSGARVNEFSIGFGPRLFKKKYGETEYSFRALLFGGYVALEGEDEKSSDPRAIV NKPWPVRLAVFAAGPLMNILLAFLLLFIVFFNIGSPIPQVKSVMEGYPAEKAGIVPGDKIVMVNNTKINTWEELEKAISS NGERVLTIEIQRGNQILQKQVKPIFDKNASKVMIGIVPDYERSISLAFKTAINQTIYFSKLIILSLVMLVTGKVSVNDIM GPVGIVQAVGTVAKTGVINLLAFSALISVNLGLFNLLPLPALDGGRILFVLAEAVRGKPLPPEKEGYIHYLGFLLLIALL IFATYRDILRIF >Mature_331_residues TILISIIVLSVLVMFHEFGHFIVAKLSGARVNEFSIGFGPRLFKKKYGETEYSFRALLFGGYVALEGEDEKSSDPRAIVN KPWPVRLAVFAAGPLMNILLAFLLLFIVFFNIGSPIPQVKSVMEGYPAEKAGIVPGDKIVMVNNTKINTWEELEKAISSN GERVLTIEIQRGNQILQKQVKPIFDKNASKVMIGIVPDYERSISLAFKTAINQTIYFSKLIILSLVMLVTGKVSVNDIMG PVGIVQAVGTVAKTGVINLLAFSALISVNLGLFNLLPLPALDGGRILFVLAEAVRGKPLPPEKEGYIHYLGFLLLIALLI FATYRDILRIF
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=231, Percent_Identity=32.4675324675325, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR004387 - InterPro: IPR008915 [H]
Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 36541; Mature: 36410
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILISIIVLSVLVMFHEFGHFIVAKLSGARVNEFSIGFGPRLFKKKYGETEYSFRALLF CHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCHHHHHHHCCCCHHHHHHHEE GGYVALEGEDEKSSDPRAIVNKPWPVRLAVFAAGPLMNILLAFLLLFIVFFNIGSPIPQV CCEEEEECCCCCCCCCCEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHH KSVMEGYPAEKAGIVPGDKIVMVNNTKINTWEELEKAISSNGERVLTIEIQRGNQILQKQ HHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHH VKPIFDKNASKVMIGIVPDYERSISLAFKTAINQTIYFSKLIILSLVMLVTGKVSVNDIM HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GPVGIVQAVGTVAKTGVINLLAFSALISVNLGLFNLLPLPALDGGRILFVLAEAVRGKPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEHHHHCCCCC PPEKEGYIHYLGFLLLIALLIFATYRDILRIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TILISIIVLSVLVMFHEFGHFIVAKLSGARVNEFSIGFGPRLFKKKYGETEYSFRALLF HHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCHHHHHHHCCCCHHHHHHHEE GGYVALEGEDEKSSDPRAIVNKPWPVRLAVFAAGPLMNILLAFLLLFIVFFNIGSPIPQV CCEEEEECCCCCCCCCCEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHH KSVMEGYPAEKAGIVPGDKIVMVNNTKINTWEELEKAISSNGERVLTIEIQRGNQILQKQ HHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHH VKPIFDKNASKVMIGIVPDYERSISLAFKTAINQTIYFSKLIILSLVMLVTGKVSVNDIM HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GPVGIVQAVGTVAKTGVINLLAFSALISVNLGLFNLLPLPALDGGRILFVLAEAVRGKPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEHHHHCCCCC PPEKEGYIHYLGFLLLIALLIFATYRDILRIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]