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The map label for this gene is ispH [H]

Identifier: 167040244

GI number: 167040244

Start: 1622871

End: 1623968

Strand: Direct

Name: ispH [H]

Synonym: Teth514_1607

Alternate gene names: 167040244

Gene position: 1622871-1623968 (Clockwise)

Preceding gene: 167040243

Following gene: 167040245

Centisome position: 66.04

GC content: 31.42

Gene sequence:

>1098_bases
ATGAGTGATTTTTTAGAAGGTTATACTTTTAAGACGTTGCGACCTGGAGACATTGTCAAGGGAAAAGTGATAAAAGTTTC
TGATGAGGGGATTATTGCAAATATTGACTATAAATCAGATGCTTTTGTGCCTAAAAATGAACTTTCTTTAAATCCTAATT
TTGATGTAAAAAAGACCTTCAATGTTGAGGATGAGTTAAATTTATATATAATAAGTGTGGAAAATGATGAAGGAAACGTA
TTAGCCTCTAAAGTTATGGCTGATGATAAACTGAGCAGAGAAAAAATTGAAAAAGCCTATAAAAATGAAGAGATAATTGA
AGGAGAAGTTATTGAGGTTGTAAAAGGCGGAGTGATTGCCTACTCATTAGGAGCTAAGGTTTTTATTCCTGCTTCTCAAC
TGGAATTACATTATGTCGACAAATTAAATGAATATTTAGGTAAAACTTTGCGGCTTCGAATAATTGAGTATATTCCTGGC
AAGAAAATTGTTGGATCACAAAAAGAAGTACTAAAATTAGAAAGGGAAAAAGCTAAAAAAGCGCTTTTATCTAATTTGAA
AGAGGGAGACATAGTAGAAGGGAGAGTAAAAAACATAATAGATAAGGGGGCTTTTGTAGACATAGGAGGTTTTGATGGTT
TTATCCCTCTAAGTGAAATTAGCTGGGAAAGAATTAAAAATCCGCGAGAAGTATTGGGAATGGGAGATAAAGTGTCGATT
TATATATTAAAGGTGGATGAAAAAAATGAAAAAATTACTTTGAGCCTGAGAAAAGTGTTGCCAGATCCGTGGAAAAATGT
AGAAACGAAATATCACGAAGGAGAGGTGCTAAAGGGAACTATCACTAAAATTACGCCTTTTGGGGTATTTGTGCAGTTAG
AACCAGGGATAGAAGGATTAGTTCATAAAAATAATTTAGAAAATAGTATCAAAACATACAAAATAAATGATATTATAGGA
GTAGAAATATTGAACATAAATCAACAAGATAAAAAAATAAATCTTAAAGAAGTGCCTCTTGAAGAAGAAGATATTGTAGA
AATAGAGCATCAAGAGCTTAGAATTACTTTGGGAGAAATATTTAATAAAAATTTTTAA

Upstream 100 bases:

>100_bases
GACCATGAGATTATAGGAGTAACAGCAGGAGCTTCAACCCCCGATTATGTGATAGAGGACGTGATAAAAAAAATTAGATT
TTTAAAAGGGGAAGATGGGG

Downstream 100 bases:

>100_bases
ACTGTCATGTAAAAAACCTTGACAAAAGAAAAAAATCTGATAAAATTAAAATCATTGAATGTATACATTATTTTAGTAAA
GGAGGCACGATACAAAATGA

Product: RNA-binding S1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSDFLEGYTFKTLRPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTFNVEDELNLYIISVENDEGNV
LASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIAYSLGAKVFIPASQLELHYVDKLNEYLGKTLRLRIIEYIPG
KKIVGSQKEVLKLEREKAKKALLSNLKEGDIVEGRVKNIIDKGAFVDIGGFDGFIPLSEISWERIKNPREVLGMGDKVSI
YILKVDEKNEKITLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEGLVHKNNLENSIKTYKINDIIG
VEILNINQQDKKINLKEVPLEEEDIVEIEHQELRITLGEIFNKNF

Sequences:

>Translated_365_residues
MSDFLEGYTFKTLRPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTFNVEDELNLYIISVENDEGNV
LASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIAYSLGAKVFIPASQLELHYVDKLNEYLGKTLRLRIIEYIPG
KKIVGSQKEVLKLEREKAKKALLSNLKEGDIVEGRVKNIIDKGAFVDIGGFDGFIPLSEISWERIKNPREVLGMGDKVSI
YILKVDEKNEKITLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEGLVHKNNLENSIKTYKINDIIG
VEILNINQQDKKINLKEVPLEEEDIVEIEHQELRITLGEIFNKNF
>Mature_364_residues
SDFLEGYTFKTLRPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTFNVEDELNLYIISVENDEGNVL
ASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIAYSLGAKVFIPASQLELHYVDKLNEYLGKTLRLRIIEYIPGK
KIVGSQKEVLKLEREKAKKALLSNLKEGDIVEGRVKNIIDKGAFVDIGGFDGFIPLSEISWERIKNPREVLGMGDKVSIY
ILKVDEKNEKITLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEGLVHKNNLENSIKTYKINDIIGV
EILNINQQDKKINLKEVPLEEEDIVEIEHQELRITLGEIFNKNF

Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) [H]

COG id: COG0539

COG function: function code J; Ribosomal protein S1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 S1 motif domains [H]

Homologues:

Organism=Escherichia coli, GI1787140, Length=329, Percent_Identity=31.306990881459, Blast_Score=177, Evalue=7e-46,
Organism=Saccharomyces cerevisiae, GI6323885, Length=270, Percent_Identity=24.8148148148148, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: 16,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003451
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR000110
- InterPro:   IPR022967 [H]

Pfam domain/function: PF02401 LYTB; PF00575 S1 [H]

EC number: =1.17.1.2 [H]

Molecular weight: Translated: 41355; Mature: 41224

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFLEGYTFKTLRPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTF
CCCHHCCCEEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
NVEDELNLYIISVENDEGNVLASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIA
CCCCCCEEEEEEEECCCCCEEEHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEE
YSLGAKVFIPASQLELHYVDKLNEYLGKTLRLRIIEYIPGKKIVGSQKEVLKLEREKAKK
EECCCEEEEEHHHEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
ALLSNLKEGDIVEGRVKNIIDKGAFVDIGGFDGFIPLSEISWERIKNPREVLGMGDKVSI
HHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCHHHCCHHHHCCCHHHHCCCCEEEE
YILKVDEKNEKITLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEGL
EEEEECCCCCEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCE
VHKNNLENSIKTYKINDIIGVEILNINQQDKKINLKEVPLEEEDIVEIEHQELRITLGEI
EECCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCEECCCCCCCCEEEECHHEEEEEHHH
FNKNF
CCCCC
>Mature Secondary Structure 
SDFLEGYTFKTLRPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTF
CCHHCCCEEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
NVEDELNLYIISVENDEGNVLASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIA
CCCCCCEEEEEEEECCCCCEEEHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEE
YSLGAKVFIPASQLELHYVDKLNEYLGKTLRLRIIEYIPGKKIVGSQKEVLKLEREKAKK
EECCCEEEEEHHHEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
ALLSNLKEGDIVEGRVKNIIDKGAFVDIGGFDGFIPLSEISWERIKNPREVLGMGDKVSI
HHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCHHHCCHHHHCCCHHHHCCCCEEEE
YILKVDEKNEKITLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEGL
EEEEECCCCCEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCE
VHKNNLENSIKTYKINDIIGVEILNINQQDKKINLKEVPLEEEDIVEIEHQELRITLGEI
EECCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCEECCCCCCCCEEEECHHEEEEEHHH
FNKNF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]