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The map label for this gene is ccpN [H]

Identifier: 167039990

GI number: 167039990

Start: 1385160

End: 1385801

Strand: Direct

Name: ccpN [H]

Synonym: Teth514_1349

Alternate gene names: 167039990

Gene position: 1385160-1385801 (Clockwise)

Preceding gene: 167039989

Following gene: 167039991

Centisome position: 56.37

GC content: 36.6

Gene sequence:

>642_bases
GTGATAAAGATTCAACTGACAAACCGCCAGCATATAATTATTGACATTGTCAAGAAACATCAACCCATTACAGGGGAACA
AATAGCTGAGAAATTAAATGTCACAAGAGCGACTTTAAGACCGGATTTGGCAATATTAACTATGTCTGGGATCTTAGAGG
CGAGGCCAAAAGTGGGATATTTTTATACAGGAAAATCACCCCTCAGTTTAGTAGAAGATTATATAAAGAGCATAAAAGTA
AAAGATATCAAGTCTTTACCTGTAGTGGTAGAGGAAAGTACATCAGTGTATGATGCCATTGTAACACTTTTTTTAAAAGA
CGTCGGGACAATTTTTGTACAGGATGGAGGATTTTTAACGGGCGCTGTTTCAAGAAAAGACTTTTTAAAAATCGCAATAG
GCAACACTGATATTTATAAGGTCCCGGTGGGAATAATTATGACCCGTATGCCTAACATAGTTACAACTTATGATGATGAG
CCTGTGTATAATGCTGCTGTTAAAATTATAGAGCACGAAGTAGACAGTCTTCCTGTAGTTGAACCTGTAGTGGGAAGTGA
TGGAAAACAAGGATACAAAGTGACAGGAAGAATTTCGAAAACTAATATAACTAAATTGTTTGTAAAGCTTGGGGAAGGTT
AG

Upstream 100 bases:

>100_bases
TCTTATAAACTTGTGATATAATTATACTAAAGTAATAAACCGATAGAAAACGTTTATGAAACGACAGAGGAAAGTATAAA
TTGTCAAAAACTTTAAAGGG

Downstream 100 bases:

>100_bases
GGGGATTTCTTGAATGGAAGAAGGAGTATCAATTTACTTGGTTTCAGATTCTAATGTAGATACAGCAGAAAACATTGCGA
GTATTGCTGCTGCTCACTTT

Product: signal-transduction protein

Products: NA

Alternate protein names: Catabolite control protein N; Control catabolite protein of gluconeogenesis [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MIKIQLTNRQHIIIDIVKKHQPITGEQIAEKLNVTRATLRPDLAILTMSGILEARPKVGYFYTGKSPLSLVEDYIKSIKV
KDIKSLPVVVEESTSVYDAIVTLFLKDVGTIFVQDGGFLTGAVSRKDFLKIAIGNTDIYKVPVGIIMTRMPNIVTTYDDE
PVYNAAVKIIEHEVDSLPVVEPVVGSDGKQGYKVTGRISKTNITKLFVKLGEG

Sequences:

>Translated_213_residues
MIKIQLTNRQHIIIDIVKKHQPITGEQIAEKLNVTRATLRPDLAILTMSGILEARPKVGYFYTGKSPLSLVEDYIKSIKV
KDIKSLPVVVEESTSVYDAIVTLFLKDVGTIFVQDGGFLTGAVSRKDFLKIAIGNTDIYKVPVGIIMTRMPNIVTTYDDE
PVYNAAVKIIEHEVDSLPVVEPVVGSDGKQGYKVTGRISKTNITKLFVKLGEG
>Mature_213_residues
MIKIQLTNRQHIIIDIVKKHQPITGEQIAEKLNVTRATLRPDLAILTMSGILEARPKVGYFYTGKSPLSLVEDYIKSIKV
KDIKSLPVVVEESTSVYDAIVTLFLKDVGTIFVQDGGFLTGAVSRKDFLKIAIGNTDIYKVPVGIIMTRMPNIVTTYDDE
PVYNAAVKIIEHEVDSLPVVEPVVGSDGKQGYKVTGRISKTNITKLFVKLGEG

Specific function: Transcription repressor that binds to the promoter of gapB and pckA genes, preventing their expression. Acts as a regulator for catabolite repression of gluconeogenic genes [H]

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR016842
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00571 CBS; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 23488; Mature: 23488

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIQLTNRQHIIIDIVKKHQPITGEQIAEKLNVTRATLRPDLAILTMSGILEARPKVGY
CEEEEECCCCEEEEEEEHHCCCCCHHHHHHHHCCHHHHCCCCEEEEEEHHHHHCCCCCCE
FYTGKSPLSLVEDYIKSIKVKDIKSLPVVVEESTSVYDAIVTLFLKDVGTIFVQDGGFLT
EEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEECCCEEE
GAVSRKDFLKIAIGNTDIYKVPVGIIMTRMPNIVTTYDDEPVYNAAVKIIEHEVDSLPVV
EECCCCCEEEEEECCCEEEEECHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCC
EPVVGSDGKQGYKVTGRISKTNITKLFVKLGEG
CCCCCCCCCCCEEEEEEEEHHHHEEEEEEECCC
>Mature Secondary Structure
MIKIQLTNRQHIIIDIVKKHQPITGEQIAEKLNVTRATLRPDLAILTMSGILEARPKVGY
CEEEEECCCCEEEEEEEHHCCCCCHHHHHHHHCCHHHHCCCCEEEEEEHHHHHCCCCCCE
FYTGKSPLSLVEDYIKSIKVKDIKSLPVVVEESTSVYDAIVTLFLKDVGTIFVQDGGFLT
EEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEECCCEEE
GAVSRKDFLKIAIGNTDIYKVPVGIIMTRMPNIVTTYDDEPVYNAAVKIIEHEVDSLPVV
EECCCCCEEEEEECCCEEEEECHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCC
EPVVGSDGKQGYKVTGRISKTNITKLFVKLGEG
CCCCCCCCCCCEEEEEEEEHHHHEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]