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The map label for this gene is ycfF [C]

Identifier: 167039975

GI number: 167039975

Start: 1372686

End: 1373030

Strand: Direct

Name: ycfF [C]

Synonym: Teth514_1334

Alternate gene names: 167039975

Gene position: 1372686-1373030 (Clockwise)

Preceding gene: 167039974

Following gene: 167039976

Centisome position: 55.86

GC content: 34.2

Gene sequence:

>345_bases
ATGTCAGATTGCATTTTTTGTAAAATTATAAATAAAGAAGTACCTTCCAATATAGTCTATGAAGATGATTTAGTAGTAGC
ATTTAGAGATATTAACCCCCAAGCACCTGTGCATATCCTCATTGTGCCAAAAGAACATATACCGACATTGTTAGATTTAA
ATGAGGATAACAAACATATAGTATCTCATGCTTATATGGTGGCAAAAGAATTGGCAAAAAAAGAGGGCATTGACGAAAAA
GGTTATAGAATTGTATCAAACTGTGGAAATGACGGGGGACAAACGGTATATCACATACATTTTCATCTTTTAGGGGGTAG
ATTTATGACTTGGCCACCAGGTTAA

Upstream 100 bases:

>100_bases
TTTTCCAGTGAAAATAAAAGAAATAAAAGATAATTTCTTAATTGGAGAAATTGAAGGAATTTAACCTGATGTGTAGAATA
TAAAAAGAGGAGGTGAAAGG

Downstream 100 bases:

>100_bases
TCATTGACACATTATGGTTTTAGGAGTATAATAAAATGAGAATTTTCAGCAAGACATCGCAGCAGAATACGCAGCTTAGC
TTGAGCAGTTTATCTGGAGG

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSDCIFCKIINKEVPSNIVYEDDLVVAFRDINPQAPVHILIVPKEHIPTLLDLNEDNKHIVSHAYMVAKELAKKEGIDEK
GYRIVSNCGNDGGQTVYHIHFHLLGGRFMTWPPG

Sequences:

>Translated_114_residues
MSDCIFCKIINKEVPSNIVYEDDLVVAFRDINPQAPVHILIVPKEHIPTLLDLNEDNKHIVSHAYMVAKELAKKEGIDEK
GYRIVSNCGNDGGQTVYHIHFHLLGGRFMTWPPG
>Mature_113_residues
SDCIFCKIINKEVPSNIVYEDDLVVAFRDINPQAPVHILIVPKEHIPTLLDLNEDNKHIVSHAYMVAKELAKKEGIDEKG
YRIVSNCGNDGGQTVYHIHFHLLGGRFMTWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=113, Percent_Identity=51.3274336283186, Blast_Score=129, Evalue=5e-31,
Organism=Homo sapiens, GI14211923, Length=113, Percent_Identity=46.9026548672566, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1787346, Length=105, Percent_Identity=55.2380952380952, Blast_Score=114, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17506713, Length=113, Percent_Identity=44.2477876106195, Blast_Score=119, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6320078, Length=115, Percent_Identity=39.1304347826087, Blast_Score=74, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28574010, Length=112, Percent_Identity=45.5357142857143, Blast_Score=115, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24581222, Length=112, Percent_Identity=45.5357142857143, Blast_Score=115, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12880; Mature: 12749

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDCIFCKIINKEVPSNIVYEDDLVVAFRDINPQAPVHILIVPKEHIPTLLDLNEDNKHI
CCCEEEEEEECCCCCCCEEECCCEEEEEECCCCCCCEEEEEECHHHCCEEEECCCCCCHH
VSHAYMVAKELAKKEGIDEKGYRIVSNCGNDGGQTVYHIHFHLLGGRFMTWPPG
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCEEEECCCC
>Mature Secondary Structure 
SDCIFCKIINKEVPSNIVYEDDLVVAFRDINPQAPVHILIVPKEHIPTLLDLNEDNKHI
CCEEEEEEECCCCCCCEEECCCEEEEEECCCCCCCEEEEEECHHHCCEEEECCCCCCHH
VSHAYMVAKELAKKEGIDEKGYRIVSNCGNDGGQTVYHIHFHLLGGRFMTWPPG
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108129; 1472710 [H]