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The map label for this gene is deoD

Identifier: 167039961

GI number: 167039961

Start: 1357572

End: 1358273

Strand: Direct

Name: deoD

Synonym: Teth514_1318

Alternate gene names: 167039961

Gene position: 1357572-1358273 (Clockwise)

Preceding gene: 167039960

Following gene: 167039962

Centisome position: 55.25

GC content: 35.75

Gene sequence:

>702_bases
ATGAGCATACATATTGGGGCTAAAGAAAACGAAATCGCTCAAACGGTGTTGTTGCCAGGAGATCCTTTAAGAGCTAAATA
TATAGCAGAAAATTTTCTTGAAGATGCAAAATGTTACAATGAAGTTAGAGGAATGTATGGTTTTACAGGATATTATAAAG
GGAAAAGAGTGTCAGTTCAAGGAACAGGGATGGGAGTACCTTCCTTGTCTATTTATGTAAATGAGCTTATAAACAGTTAC
AACGTGAAAAATCTTATAAGGATAGGTACTTGTGGCTCTTTACAACCAGATATCAAGCTTAGAGATATAGTAATTGCCAT
GAGTTCTTCGACAGACTCTGCAATAAATAAAATTAGATTTAATGGTATGGATTATGCTCCTACAGCAAGTTTTAAATTAT
TAAAAAAAGCCTATGATAAAGCAATGGAGTTAGGGATACAACCTAAAGTAGGGAATATTCTTACAACCGATACTTTTTAT
AACGATGACCCAGACAGTTGGAAACTATGGGCGAAGTTTGGTGTTTTGGCAGTAGAAATGGAAACGGCAGGACTATATAC
TTTGGCTGCTAAGTACAATGTAGATGCTCTTACAATATTGACAGTGAGCGATAGCTTGGTTACCGGAGAAGCAACGACAG
CTGAAGAAAGGCAAAAGACTTTTATGAACATGGTAAAAATTGCACTAGAAATAGCTGAATAA

Upstream 100 bases:

>100_bases
AATTAAAAAAATGTTTGATCCATAAATTTTTGTTTGATTTAAAAGTTGTTTTTTGCTAATATTATATATGGGCAAAACTA
TTATAGAAGGAGAGATTTAA

Downstream 100 bases:

>100_bases
TAATTTTTTAAAAGAGGATAACCTTGTTTATCCTCTTTTAAAATAATCGAAAAAGGAGCTGATAGTTGATGAAACCTTTA
AAATTTAAGCCTATTTTTAT

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSIHIGAKENEIAQTVLLPGDPLRAKYIAENFLEDAKCYNEVRGMYGFTGYYKGKRVSVQGTGMGVPSLSIYVNELINSY
NVKNLIRIGTCGSLQPDIKLRDIVIAMSSSTDSAINKIRFNGMDYAPTASFKLLKKAYDKAMELGIQPKVGNILTTDTFY
NDDPDSWKLWAKFGVLAVEMETAGLYTLAAKYNVDALTILTVSDSLVTGEATTAEERQKTFMNMVKIALEIAE

Sequences:

>Translated_233_residues
MSIHIGAKENEIAQTVLLPGDPLRAKYIAENFLEDAKCYNEVRGMYGFTGYYKGKRVSVQGTGMGVPSLSIYVNELINSY
NVKNLIRIGTCGSLQPDIKLRDIVIAMSSSTDSAINKIRFNGMDYAPTASFKLLKKAYDKAMELGIQPKVGNILTTDTFY
NDDPDSWKLWAKFGVLAVEMETAGLYTLAAKYNVDALTILTVSDSLVTGEATTAEERQKTFMNMVKIALEIAE
>Mature_232_residues
SIHIGAKENEIAQTVLLPGDPLRAKYIAENFLEDAKCYNEVRGMYGFTGYYKGKRVSVQGTGMGVPSLSIYVNELINSYN
VKNLIRIGTCGSLQPDIKLRDIVIAMSSSTDSAINKIRFNGMDYAPTASFKLLKKAYDKAMELGIQPKVGNILTTDTFYN
DDPDSWKLWAKFGVLAVEMETAGLYTLAAKYNVDALTILTVSDSLVTGEATTAEERQKTFMNMVKIALEIAE

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family

Homologues:

Organism=Escherichia coli, GI1790844, Length=227, Percent_Identity=54.625550660793, Blast_Score=270, Evalue=5e-74,
Organism=Escherichia coli, GI1790265, Length=246, Percent_Identity=29.2682926829268, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOD_THEP3 (B0K889)

Other databases:

- EMBL:   CP000924
- RefSeq:   YP_001664738.1
- ProteinModelPortal:   B0K889
- SMR:   B0K889
- GeneID:   5875553
- GenomeReviews:   CP000924_GR
- KEGG:   tpd:Teth39_0743
- HOGENOM:   HBG617197
- OMA:   SFETHAF
- ProtClustDB:   PRK05819
- BioCyc:   TPSE340099:TETH39_0743-MONOMER
- HAMAP:   MF_01627
- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845
- PANTHER:   PTHR21234
- TIGRFAMs:   TIGR00107

Pfam domain/function: PF01048 PNP_UDP_1

EC number: =2.4.2.1

Molecular weight: Translated: 25712; Mature: 25581

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIHIGAKENEIAQTVLLPGDPLRAKYIAENFLEDAKCYNEVRGMYGFTGYYKGKRVSVQ
CEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEE
GTGMGVPSLSIYVNELINSYNVKNLIRIGTCGSLQPDIKLRDIVIAMSSSTDSAINKIRF
ECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCHHHHHHEEE
NGMDYAPTASFKLLKKAYDKAMELGIQPKVGNILTTDTFYNDDPDSWKLWAKFGVLAVEM
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEHEEECCEEEEEE
ETAGLYTLAAKYNVDALTILTVSDSLVTGEATTAEERQKTFMNMVKIALEIAE
ECCCEEEEEEECCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIHIGAKENEIAQTVLLPGDPLRAKYIAENFLEDAKCYNEVRGMYGFTGYYKGKRVSVQ
EEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEE
GTGMGVPSLSIYVNELINSYNVKNLIRIGTCGSLQPDIKLRDIVIAMSSSTDSAINKIRF
ECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCHHHHHHEEE
NGMDYAPTASFKLLKKAYDKAMELGIQPKVGNILTTDTFYNDDPDSWKLWAKFGVLAVEM
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEHEEECCEEEEEE
ETAGLYTLAAKYNVDALTILTVSDSLVTGEATTAEERQKTFMNMVKIALEIAE
ECCCEEEEEEECCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA