| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
Click here to switch to the map view.
The map label for this gene is gmuF [H]
Identifier: 167039962
GI number: 167039962
Start: 1358342
End: 1359298
Strand: Direct
Name: gmuF [H]
Synonym: Teth514_1319
Alternate gene names: 167039962
Gene position: 1358342-1359298 (Clockwise)
Preceding gene: 167039961
Following gene: 167039963
Centisome position: 55.28
GC content: 32.5
Gene sequence:
>957_bases ATGAAACCTTTAAAATTTAAGCCTATTTTTATGGAGAGAATATGGGGAGGTACTGCATTAAGAGATAAATTTGGATTTGA TATTCACGAGGGTAAAAAAATTGGAGAATTGTGGACAATATCTGACAATAGAACAGCTGTCAGTGTAATTGAAGGTGGAG AATTTGACGGGCAAAAATTAAGTGATATAACTTACAAATTTTCTGAGGATATATATGGCAAGGGGGTAAATTATCAAAGA TTTCCTTTGCTTATCAAAATAATTGATGCGCAAGACAAACTTTCTGTCCAAGTTCATCCAGATGATGAATATGCTTTTAA ATACGAAAATGGCGATTCTGGAAAAACAGAGATGTGGTATATAATAGATGCAAAACCAGGGGCTAAACTTGTATGTGGTT TAAAGGAAGGAACTACAAAAGAAGAATTTAAAAGGCTATTGGAGGAAGAAAGATTAGAAGAATGTTTAAAAGAAATAGAA GTAAAACCAGGAGATGCTGTTTACATACCTTCAGGGATGGTGCATGCTATAGGTGAAGGAATACTTATTTGTGAAATTCA ACAAAATTCAGACCTTACCTATAGAGTGTATGATTACAATAGAGTAGATGAATTCGGCAGGAAGAGAGAGTTACATATAG AAAAAGCATTAGATGTTATAGATTTTAATTTAAAAACAGATAAAATAATACCTGAATTTGAAGAAATACAAGGCGGACGC ATATCTCACGTTGTTAAATCTCCATATTTTCAGGTAAGTATAATTGAAATAAATAAAGAAGTAGATATAGATACAAAGGG AAAATTTAACACTTTAACAGCTGTAGAAGGATATTGTAAAATTGCCTATACTGAAGGCACCACTGAATTAAAAGCAGGAG AGACTGTATTAATACCTGCTTCTATTCCGAGTTATACAATAGAGGGAAATTGCAAGGTGCTCAAAGCTTATATATAG
Upstream 100 bases:
>100_bases TGGTAAAAATTGCACTAGAAATAGCTGAATAATAATTTTTTAAAAGAGGATAACCTTGTTTATCCTCTTTTAAAATAATC GAAAAAGGAGCTGATAGTTG
Downstream 100 bases:
>100_bases AAAGCGTAAATATTGACAACCTTTTATTAAAATTGTATAATAAAAAAGCAAGGAGTGGGGTTATAGCTCAGCTGGTCAGA GCGCTACGTTGACATCGTAG
Product: mannose-6-phosphate isomerase, class I
Products: NA
Alternate protein names: Glucomannan utilization protein F; Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKPLKFKPIFMERIWGGTALRDKFGFDIHEGKKIGELWTISDNRTAVSVIEGGEFDGQKLSDITYKFSEDIYGKGVNYQR FPLLIKIIDAQDKLSVQVHPDDEYAFKYENGDSGKTEMWYIIDAKPGAKLVCGLKEGTTKEEFKRLLEEERLEECLKEIE VKPGDAVYIPSGMVHAIGEGILICEIQQNSDLTYRVYDYNRVDEFGRKRELHIEKALDVIDFNLKTDKIIPEFEEIQGGR ISHVVKSPYFQVSIIEINKEVDIDTKGKFNTLTAVEGYCKIAYTEGTTELKAGETVLIPASIPSYTIEGNCKVLKAYI
Sequences:
>Translated_318_residues MKPLKFKPIFMERIWGGTALRDKFGFDIHEGKKIGELWTISDNRTAVSVIEGGEFDGQKLSDITYKFSEDIYGKGVNYQR FPLLIKIIDAQDKLSVQVHPDDEYAFKYENGDSGKTEMWYIIDAKPGAKLVCGLKEGTTKEEFKRLLEEERLEECLKEIE VKPGDAVYIPSGMVHAIGEGILICEIQQNSDLTYRVYDYNRVDEFGRKRELHIEKALDVIDFNLKTDKIIPEFEEIQGGR ISHVVKSPYFQVSIIEINKEVDIDTKGKFNTLTAVEGYCKIAYTEGTTELKAGETVLIPASIPSYTIEGNCKVLKAYI >Mature_318_residues MKPLKFKPIFMERIWGGTALRDKFGFDIHEGKKIGELWTISDNRTAVSVIEGGEFDGQKLSDITYKFSEDIYGKGVNYQR FPLLIKIIDAQDKLSVQVHPDDEYAFKYENGDSGKTEMWYIIDAKPGAKLVCGLKEGTTKEEFKRLLEEERLEECLKEIE VKPGDAVYIPSGMVHAIGEGILICEIQQNSDLTYRVYDYNRVDEFGRKRELHIEKALDVIDFNLKTDKIIPEFEEIQGGR ISHVVKSPYFQVSIIEINKEVDIDTKGKFNTLTAVEGYCKIAYTEGTTELKAGETVLIPASIPSYTIEGNCKVLKAYI
Specific function: Seems to be involved in the degradation of glucomannan [H]
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR014628 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 36165; Mature: 36165
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLKFKPIFMERIWGGTALRDKFGFDIHEGKKIGELWTISDNRTAVSVIEGGEFDGQKL CCCCCCCHHHHHHHCCCCEEHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCH SDITYKFSEDIYGKGVNYQRFPLLIKIIDAQDKLSVQVHPDDEYAFKYENGDSGKTEMWY HHEEEEECCCCCCCCCCEEECEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCEEEEE IIDAKPGAKLVCGLKEGTTKEEFKRLLEEERLEECLKEIEVKPGDAVYIPSGMVHAIGEG EEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCC ILICEIQQNSDLTYRVYDYNRVDEFGRKRELHIEKALDVIDFNLKTDKIIPEFEEIQGGR EEEEEEECCCCCEEEEEECCCHHHHCCCCEEEHHHHHEEEEECCCCCCCCCCHHHHCCCE ISHVVKSPYFQVSIIEINKEVDIDTKGKFNTLTAVEGYCKIAYTEGTTELKAGETVLIPA EEHHHCCCCEEEEEEEECCEECCCCCCCCEEEEEECCEEEEEEECCCCEECCCCEEEEEC SIPSYTIEGNCKVLKAYI CCCCEEECCCEEEEEEEC >Mature Secondary Structure MKPLKFKPIFMERIWGGTALRDKFGFDIHEGKKIGELWTISDNRTAVSVIEGGEFDGQKL CCCCCCCHHHHHHHCCCCEEHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCH SDITYKFSEDIYGKGVNYQRFPLLIKIIDAQDKLSVQVHPDDEYAFKYENGDSGKTEMWY HHEEEEECCCCCCCCCCEEECEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCEEEEE IIDAKPGAKLVCGLKEGTTKEEFKRLLEEERLEECLKEIEVKPGDAVYIPSGMVHAIGEG EEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCC ILICEIQQNSDLTYRVYDYNRVDEFGRKRELHIEKALDVIDFNLKTDKIIPEFEEIQGGR EEEEEEECCCCCEEEEEECCCHHHHCCCCEEEHHHHHEEEEECCCCCCCCCCHHHHCCCE ISHVVKSPYFQVSIIEINKEVDIDTKGKFNTLTAVEGYCKIAYTEGTTELKAGETVLIPA EEHHHCCCCEEEEEEEECCEECCCCCCCCEEEEEECCEEEEEEECCCCEECCCCEEEEEC SIPSYTIEGNCKVLKAYI CCCCEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]