| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is pckA [H]
Identifier: 167039929
GI number: 167039929
Start: 1323124
End: 1323825
Strand: Reverse
Name: pckA [H]
Synonym: Teth514_1285
Alternate gene names: 167039929
Gene position: 1323825-1323124 (Counterclockwise)
Preceding gene: 167039931
Following gene: 167039874
Centisome position: 53.87
GC content: 34.62
Gene sequence:
>702_bases ATGTACGGTCTTGAAAAATTAAATATAATCAATGTTAAAAACGTTTACCGTAATCTTCCCGTCCCTAAATTAGTTGAAGA AGCTATAAAAAGAGGAGAAGGAGTACTTGCAAATAATGGTGCTTTTAATGTTTATACCGGTAAATACACAGGTCGTTCTC CAAATGATAAATTTATTGTGGATGAACCAGAAGTTCATGAAGATATATGGTGGGAAAATAATAAAGCTATTTCTATGGAT AAATTTGAAAGGTTGTACAACCGCTTAACTGCTTATTTACAAAATCGAGACATTTTTATATTTGACGGTTTTGTAGGTGC TGACCTTCAATATAGAATTCCTATAAGAGTTATAACAGAATATGCGTATCAGAGTTTACTGGCACGCCAATTGTTCATTC GCCCTAATGAAGAAGAACTTAGAAATCACATCCCCGAATACACGCTAATTGCTGCACCAAAGTTCAACTCTATACCTGAA TTAGACGGTGTAAATTCTGAAGCTTTTATTATATTAAGTTTCACTAAAAAACTAATTATAATCGGTGGCTCTCAGTATGG AGGGGAAATCAAAAAGTCAATCTTTACCCTCATGAACTATCTGATGCCAAAGCGCGGAGTTTTATCTATGCACTGTTCTG CAAATATGGGCAAAGATGGAGATACCACTCTCTTTTTCGGAAAAATACAAAGGTGTAACTGA
Upstream 100 bases:
>100_bases TATTGTAAATGTTAATTTTAAACTTTATAAGATATTTTTGCAATTTTAAACACATTAAAATGCAAATTAGCTTTTATAAA ATTAAAAGGAGGCATATTAA
Downstream 100 bases:
>100_bases TGATATCAAAAAATCAGGCCCAAATGTTTAAAAACATAAAGTCTCCTTGCAGTGCGTACTGCTAGGAGACTTTTATAATT TGTAGCCATTATAATATATC
Product: phosphoenolpyruvate carboxykinase (ATP)
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MYGLEKLNIINVKNVYRNLPVPKLVEEAIKRGEGVLANNGAFNVYTGKYTGRSPNDKFIVDEPEVHEDIWWENNKAISMD KFERLYNRLTAYLQNRDIFIFDGFVGADLQYRIPIRVITEYAYQSLLARQLFIRPNEEELRNHIPEYTLIAAPKFNSIPE LDGVNSEAFIILSFTKKLIIIGGSQYGGEIKKSIFTLMNYLMPKRGVLSMHCSANMGKDGDTTLFFGKIQRCN
Sequences:
>Translated_233_residues MYGLEKLNIINVKNVYRNLPVPKLVEEAIKRGEGVLANNGAFNVYTGKYTGRSPNDKFIVDEPEVHEDIWWENNKAISMD KFERLYNRLTAYLQNRDIFIFDGFVGADLQYRIPIRVITEYAYQSLLARQLFIRPNEEELRNHIPEYTLIAAPKFNSIPE LDGVNSEAFIILSFTKKLIIIGGSQYGGEIKKSIFTLMNYLMPKRGVLSMHCSANMGKDGDTTLFFGKIQRCN >Mature_233_residues MYGLEKLNIINVKNVYRNLPVPKLVEEAIKRGEGVLANNGAFNVYTGKYTGRSPNDKFIVDEPEVHEDIWWENNKAISMD KFERLYNRLTAYLQNRDIFIFDGFVGADLQYRIPIRVITEYAYQSLLARQLFIRPNEEELRNHIPEYTLIAAPKFNSIPE LDGVNSEAFIILSFTKKLIIIGGSQYGGEIKKSIFTLMNYLMPKRGVLSMHCSANMGKDGDTTLFFGKIQRCN
Specific function: Rate-limiting gluconeogenic enzyme. [C]
COG id: COG1866
COG function: function code C; Phosphoenolpyruvate carboxykinase (ATP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [ATP] family [H]
Homologues:
Organism=Escherichia coli, GI1789807, Length=237, Percent_Identity=37.9746835443038, Blast_Score=174, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6322950, Length=221, Percent_Identity=41.6289592760181, Blast_Score=162, Evalue=4e-41,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001272 - InterPro: IPR013035 - InterPro: IPR008210 - InterPro: IPR015994 [H]
Pfam domain/function: PF01293 PEPCK_ATP [H]
EC number: =4.1.1.49 [H]
Molecular weight: Translated: 26774; Mature: 26774
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGLEKLNIINVKNVYRNLPVPKLVEEAIKRGEGVLANNGAFNVYTGKYTGRSPNDKFIV CCCCCEEEEEEHHHHHHCCCCHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCCCCCEEE DEPEVHEDIWWENNKAISMDKFERLYNRLTAYLQNRDIFIFDGFVGADLQYRIPIRVITE CCCCCCHHHCCCCCCEECHHHHHHHHHHHHHHHCCCCEEEECCEECCCEEEECHHHHHHH YAYQSLLARQLFIRPNEEELRNHIPEYTLIAAPKFNSIPELDGVNSEAFIILSFTKKLII HHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEE IGGSQYGGEIKKSIFTLMNYLMPKRGVLSMHCSANMGKDGDTTLFFGKIQRCN EECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MYGLEKLNIINVKNVYRNLPVPKLVEEAIKRGEGVLANNGAFNVYTGKYTGRSPNDKFIV CCCCCEEEEEEHHHHHHCCCCHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCCCCCEEE DEPEVHEDIWWENNKAISMDKFERLYNRLTAYLQNRDIFIFDGFVGADLQYRIPIRVITE CCCCCCHHHCCCCCCEECHHHHHHHHHHHHHHHCCCCEEEECCEECCCEEEECHHHHHHH YAYQSLLARQLFIRPNEEELRNHIPEYTLIAAPKFNSIPELDGVNSEAFIILSFTKKLII HHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEE IGGSQYGGEIKKSIFTLMNYLMPKRGVLSMHCSANMGKDGDTTLFFGKIQRCN EECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]