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The map label for this gene is nudF [H]

Identifier: 167039931

GI number: 167039931

Start: 1324251

End: 1324715

Strand: Reverse

Name: nudF [H]

Synonym: Teth514_1287

Alternate gene names: 167039931

Gene position: 1324715-1324251 (Counterclockwise)

Preceding gene: 167039933

Following gene: 167039929

Centisome position: 53.91

GC content: 32.26

Gene sequence:

>465_bases
ATGAAACAAATAATTGTAGGAGTAGGCGGTATTGTCATAAAAGATAATAAAGTTTTATTGGTAAGGCATACTTACGGCCA
ATTTAAAGGCAAATGGATAATACCCGGCGGCCATGTGGAGACCGGTGAAAATATAGACGATGCAGTTTTAAGAGAAATAA
AAGAAGAAACTTCAATAGAAACCCGTGTAAAAAATATCATTTCTATAAGAAGTATAATACTTCCCGATGGCAATTCGGAA
ATATACATTGTTTTTTTGTTAGATTATGTTTCAGGAACTCCTACTTCTGACGGAATAGAAAATGACGCCGCAGCTTTTTT
TGACATAGATAAAGTCATAAATGATGAAAATGTAGTCTATCTTTCTCGCTATTTAATTAAAAAGGTATTGACACACACTT
ATAATAAATTGTCCCCTGACCTCTTTTATCCTTTTGGCAATTTTAATTATAAGCTATTTTGTTGA

Upstream 100 bases:

>100_bases
CGATTAATCTCATTTTCCCACCATTTTCTAATTTATTTTAATGCAAAAAATTTATGTGGTATAATCAATTTATAAATAAA
ATACAGCGGTTGGTGATTTT

Downstream 100 bases:

>100_bases
AATATATTCGTACTTATCTTTATTTTTAAAAGCCTCATCAAGCACTTCTGTATCATAATAGACTGCACCACATTTTTGAC
AAACATATGCCGGCACATCT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKQIIVGVGGIVIKDNKVLLVRHTYGQFKGKWIIPGGHVETGENIDDAVLREIKEETSIETRVKNIISIRSIILPDGNSE
IYIVFLLDYVSGTPTSDGIENDAAAFFDIDKVINDENVVYLSRYLIKKVLTHTYNKLSPDLFYPFGNFNYKLFC

Sequences:

>Translated_154_residues
MKQIIVGVGGIVIKDNKVLLVRHTYGQFKGKWIIPGGHVETGENIDDAVLREIKEETSIETRVKNIISIRSIILPDGNSE
IYIVFLLDYVSGTPTSDGIENDAAAFFDIDKVINDENVVYLSRYLIKKVLTHTYNKLSPDLFYPFGNFNYKLFC
>Mature_154_residues
MKQIIVGVGGIVIKDNKVLLVRHTYGQFKGKWIIPGGHVETGENIDDAVLREIKEETSIETRVKNIISIRSIILPDGNSE
IYIVFLLDYVSGTPTSDGIENDAAAFFDIDKVINDENVVYLSRYLIKKVLTHTYNKLSPDLFYPFGNFNYKLFC

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Drosophila melanogaster, GI24642239, Length=87, Percent_Identity=37.9310344827586, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 17446; Mature: 17446

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIIVGVGGIVIKDNKVLLVRHTYGQFKGKWIIPGGHVETGENIDDAVLREIKEETSIE
CCEEEEECCEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
TRVKNIISIRSIILPDGNSEIYIVFLLDYVSGTPTSDGIENDAAAFFDIDKVINDENVVY
HHHHHHHHHHEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCHHEEEHHHHCCCCCEEH
LSRYLIKKVLTHTYNKLSPDLFYPFGNFNYKLFC
HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEC
>Mature Secondary Structure
MKQIIVGVGGIVIKDNKVLLVRHTYGQFKGKWIIPGGHVETGENIDDAVLREIKEETSIE
CCEEEEECCEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
TRVKNIISIRSIILPDGNSEIYIVFLLDYVSGTPTSDGIENDAAAFFDIDKVINDENVVY
HHHHHHHHHHEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCHHEEEHHHHCCCCCEEH
LSRYLIKKVLTHTYNKLSPDLFYPFGNFNYKLFC
HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]