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The map label for this gene is ymfN [H]

Identifier: 167039896

GI number: 167039896

Start: 1291248

End: 1292855

Strand: Direct

Name: ymfN [H]

Synonym: Teth514_1251

Alternate gene names: 167039896

Gene position: 1291248-1292855 (Clockwise)

Preceding gene: 167039895

Following gene: 167039897

Centisome position: 52.55

GC content: 41.92

Gene sequence:

>1608_bases
GTGGCGGCTATACGTAAACTAAAAAAATATAAGCCGACCATCTTTAAGGCGGATGGTTCGGTATATGATAAGGACGCTGC
AGACATTGCGGTGTCTTTTATTAATTGCTTAAAGCATACCAAGGGAGAATGGTATGGGAAGCCATTTGAACTGATAGACT
GGCAGGAACAAATTATCCGAGATGTGTTTGGCATTATAAAGCCTAATGGCTACCGTCAATTTAATACTGCATATATCGAA
ATCGCTAAAAAACAAGGAAAGTCTGAGCTAGCAGCAGCGGTTGCCTTACTGCTTACTTGTGGTGATTTTGAGCATGGTGG
TGAAGTATATGGATGTGCATCTGACAGACAGCAAGCTTCCATTGTTTTTGATGTAGCAGTTGATATGGTAGAACAATGCC
CAGCTCTGAAAGCAAGAATTAAACCGGTACTATCGCAAAAACGACTTGTTTATAAACCTCTAGGTAGTTTCTATCAAGTT
TTATCTGCAGAGGCGTATACCAAGCATGGACTAAATGTGCATGGTGTGGTATTTGACGAACTTCATGCTCAGCCAAATAG
ACAGCTTTTCGATGTCATGACTCATGGCTCTGGTGATGCAAGAAAGCAGCCACTGTATTTCTTAATTACGACTGCCGGAA
ATGATACACACTCTATTTGCTACGAAGTGCATCAAAAGGCTAAAGACATCCTAGAAGGGCGAAAGGTTGACCCTACATTT
TATCCAGTTATTTATGGTGCTGATGAGAATGATGACTGGACTGATCCAAAGGTGTGGGCGAAAGCCAACCCCTCAATGGG
CATTACCGTTGACATAGAAAAGATTTATATTGCTTGTGAAAGTGCAAAGCAAAATCCAGCAGAAGAAAACTTATTTAGAC
AACTTCGTCTAAATCAATGGGTTAAACAGTCGGTACGTTGGATGCCTATGGAAAAGTGGGATAAATGTGCTTTTACTGTA
AACCTAGAAAGTCTTACAGGACGTGTGTGTTATGGTGGTTTGGACTTATCCTCTACAACCGATATAACAGCATTTGTTCT
TGTATTCCCTCCTGAGTATGAGGGAGATAAATATATCATCCTCCCTTTTTTCTGGATTCCAGAAGATAACATGGACCAAA
GGGTAAAGCGTGATCATGTGCCCTATGACGTATGGGAGAAGCAGGGGTTCTTACACACCACTGAAGGAAACGTGGTGCAT
TATGGTTACATCGAAAACTTTATCGAAGAGCTGGGCTTAAAGTACAACATTCGAGAAATTGCTTTTGACCGGTGGGGAGC
TGTACAGATGACACAAAACTTAGAGAACCTTGGGTTTACAGTAGTTCCTTTCGGTCAAGGTTTTAAAGATATGAGTCCGC
CAACGAAGGAGCTTATGAAGCTTACCTTGGAAGAGAAACTGGCGCATGGTGGTCATCCGGTGCTCCGATGGATGATGGAT
AACATCTTTATACGTACTGATCCTGCTGGAAATATCAAACCGGATAAAGAAAAATCAACTGAAAGAATAGATGGAGCTGT
CGCTACCATTATGGCTCTTGACCGAGCAATTCGCAAAGGTGGAACAGGTAACTCCGTTTATGACGGTCGAGGGCTTCTTA
TTTTGTAG

Upstream 100 bases:

>100_bases
CATTTTATTCTGACAGGGGAAGAAAAAACAAAATAACCTAATCAACTTTATAGAATATTAAGGAACTCTTAGGGGGTTCC
TTTTTTGTATCCATAGGGAG

Downstream 100 bases:

>100_bases
CAAAGGAGAGTGATGCAGATGGGATTGTTTTCTAATATTTTCAAAGCGCGTGATAAACCGAAGGATCGAACCACAGGAAG
CAATTATAGCTTCTTTTTTG

Product: phage terminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MAAIRKLKKYKPTIFKADGSVYDKDAADIAVSFINCLKHTKGEWYGKPFELIDWQEQIIRDVFGIIKPNGYRQFNTAYIE
IAKKQGKSELAAAVALLLTCGDFEHGGEVYGCASDRQQASIVFDVAVDMVEQCPALKARIKPVLSQKRLVYKPLGSFYQV
LSAEAYTKHGLNVHGVVFDELHAQPNRQLFDVMTHGSGDARKQPLYFLITTAGNDTHSICYEVHQKAKDILEGRKVDPTF
YPVIYGADENDDWTDPKVWAKANPSMGITVDIEKIYIACESAKQNPAEENLFRQLRLNQWVKQSVRWMPMEKWDKCAFTV
NLESLTGRVCYGGLDLSSTTDITAFVLVFPPEYEGDKYIILPFFWIPEDNMDQRVKRDHVPYDVWEKQGFLHTTEGNVVH
YGYIENFIEELGLKYNIREIAFDRWGAVQMTQNLENLGFTVVPFGQGFKDMSPPTKELMKLTLEEKLAHGGHPVLRWMMD
NIFIRTDPAGNIKPDKEKSTERIDGAVATIMALDRAIRKGGTGNSVYDGRGLLIL

Sequences:

>Translated_535_residues
MAAIRKLKKYKPTIFKADGSVYDKDAADIAVSFINCLKHTKGEWYGKPFELIDWQEQIIRDVFGIIKPNGYRQFNTAYIE
IAKKQGKSELAAAVALLLTCGDFEHGGEVYGCASDRQQASIVFDVAVDMVEQCPALKARIKPVLSQKRLVYKPLGSFYQV
LSAEAYTKHGLNVHGVVFDELHAQPNRQLFDVMTHGSGDARKQPLYFLITTAGNDTHSICYEVHQKAKDILEGRKVDPTF
YPVIYGADENDDWTDPKVWAKANPSMGITVDIEKIYIACESAKQNPAEENLFRQLRLNQWVKQSVRWMPMEKWDKCAFTV
NLESLTGRVCYGGLDLSSTTDITAFVLVFPPEYEGDKYIILPFFWIPEDNMDQRVKRDHVPYDVWEKQGFLHTTEGNVVH
YGYIENFIEELGLKYNIREIAFDRWGAVQMTQNLENLGFTVVPFGQGFKDMSPPTKELMKLTLEEKLAHGGHPVLRWMMD
NIFIRTDPAGNIKPDKEKSTERIDGAVATIMALDRAIRKGGTGNSVYDGRGLLIL
>Mature_534_residues
AAIRKLKKYKPTIFKADGSVYDKDAADIAVSFINCLKHTKGEWYGKPFELIDWQEQIIRDVFGIIKPNGYRQFNTAYIEI
AKKQGKSELAAAVALLLTCGDFEHGGEVYGCASDRQQASIVFDVAVDMVEQCPALKARIKPVLSQKRLVYKPLGSFYQVL
SAEAYTKHGLNVHGVVFDELHAQPNRQLFDVMTHGSGDARKQPLYFLITTAGNDTHSICYEVHQKAKDILEGRKVDPTFY
PVIYGADENDDWTDPKVWAKANPSMGITVDIEKIYIACESAKQNPAEENLFRQLRLNQWVKQSVRWMPMEKWDKCAFTVN
LESLTGRVCYGGLDLSSTTDITAFVLVFPPEYEGDKYIILPFFWIPEDNMDQRVKRDHVPYDVWEKQGFLHTTEGNVVHY
GYIENFIEELGLKYNIREIAFDRWGAVQMTQNLENLGFTVVPFGQGFKDMSPPTKELMKLTLEEKLAHGGHPVLRWMMDN
IFIRTDPAGNIKPDKEKSTERIDGAVATIMALDRAIRKGGTGNSVYDGRGLLIL

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 60707; Mature: 60576

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIRKLKKYKPTIFKADGSVYDKDAADIAVSFINCLKHTKGEWYGKPFELIDWQEQIIR
CHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHH
DVFGIIKPNGYRQFNTAYIEIAKKQGKSELAAAVALLLTCGDFEHGGEVYGCASDRQQAS
HHHHHCCCCCCCCCCHHEEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHH
IVFDVAVDMVEQCPALKARIKPVLSQKRLVYKPLGSFYQVLSAEAYTKHGLNVHGVVFDE
HHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHH
LHAQPNRQLFDVMTHGSGDARKQPLYFLITTAGNDTHSICYEVHQKAKDILEGRKVDPTF
HCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEE
YPVIYGADENDDWTDPKVWAKANPSMGITVDIEKIYIACESAKQNPAEENLFRQLRLNQW
EEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHH
VKQSVRWMPMEKWDKCAFTVNLESLTGRVCYGGLDLSSTTDITAFVLVFPPEYEGDKYII
HHHHHCCCCCCCCCCEEEEEEHHHHCCEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEE
LPFFWIPEDNMDQRVKRDHVPYDVWEKQGFLHTTEGNVVHYGYIENFIEELGLKYNIREI
EEEEECCCCCHHHHHHHCCCCHHHHHCCCCEEECCCCEEEEHHHHHHHHHCCCCEEHHHH
AFDRWGAVQMTQNLENLGFTVVPFGQGFKDMSPPTKELMKLTLEEKLAHGGHPVLRWMMD
HHCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
NIFIRTDPAGNIKPDKEKSTERIDGAVATIMALDRAIRKGGTGNSVYDGRGLLIL
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEC
>Mature Secondary Structure 
AAIRKLKKYKPTIFKADGSVYDKDAADIAVSFINCLKHTKGEWYGKPFELIDWQEQIIR
HHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHH
DVFGIIKPNGYRQFNTAYIEIAKKQGKSELAAAVALLLTCGDFEHGGEVYGCASDRQQAS
HHHHHCCCCCCCCCCHHEEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHH
IVFDVAVDMVEQCPALKARIKPVLSQKRLVYKPLGSFYQVLSAEAYTKHGLNVHGVVFDE
HHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHH
LHAQPNRQLFDVMTHGSGDARKQPLYFLITTAGNDTHSICYEVHQKAKDILEGRKVDPTF
HCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEE
YPVIYGADENDDWTDPKVWAKANPSMGITVDIEKIYIACESAKQNPAEENLFRQLRLNQW
EEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHH
VKQSVRWMPMEKWDKCAFTVNLESLTGRVCYGGLDLSSTTDITAFVLVFPPEYEGDKYII
HHHHHCCCCCCCCCCEEEEEEHHHHCCEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEE
LPFFWIPEDNMDQRVKRDHVPYDVWEKQGFLHTTEGNVVHYGYIENFIEELGLKYNIREI
EEEEECCCCCHHHHHHHCCCCHHHHHCCCCEEECCCCEEEEHHHHHHHHHCCCCEEHHHH
AFDRWGAVQMTQNLENLGFTVVPFGQGFKDMSPPTKELMKLTLEEKLAHGGHPVLRWMMD
HHCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
NIFIRTDPAGNIKPDKEKSTERIDGAVATIMALDRAIRKGGTGNSVYDGRGLLIL
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]