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The map label for this gene is 167039843

Identifier: 167039843

GI number: 167039843

Start: 1236861

End: 1237781

Strand: Direct

Name: 167039843

Synonym: Teth514_1198

Alternate gene names: NA

Gene position: 1236861-1237781 (Clockwise)

Preceding gene: 167039842

Following gene: 167039845

Centisome position: 50.33

GC content: 27.36

Gene sequence:

>921_bases
ATGAACCAGTTAATGATACAAGAAAAAATTTTTTTAAATATTGCTGTACTTTTTTTAGGGTATTTTATAAAAAAATCCAG
GAAATTTCCTGAAAATTCAGGTGATGTACTGAGCAAGATTGTGCTTTATATAACTTTACCTGCTACGATTTTAACTATTT
TTTCTCAGTATAAAATTGATGCGCGATTATTTATTCTCACTTTTATAAGTATTATTTTGGGAGTTTTGACATTTATCTTT
GGATATTTTGTGGTAAAAAAAGTTAACTTAGATAATTCTGATAAATGGACTCTGTTGGTTTCTATATGCGGATATAATAT
AGGTTTATTTGCCCTTCCCTTTATACAGCAGGTTTATGGAAATGAAGGCATTATAAATATGGCAATGTTTGATATGGGTA
ATTCTTTTATTGTTTTTGGTTTTGCCTATGGTGTATCTTTTTTAGCGGGTGGAAAAACTAATTTTAATTTAAAAGAGGTA
TCAAAAAAGATTATATATTTTTTTCCACTTGATGTGTACATATCAGCTCTTTTGATGAATTTATTTAATATCAATTTTAC
TGGGATGACAAAGGAATTTATTTATCAACTTTCCCTACCTAACAATGTTCTTGCTTTATTTACAATTGGATATTTTTTGG
ATTTTAATTTGAATAAAAATGAATTAAAAGCTTTGATAATAGGTTTGTTTGTAAAATTTTTACCGGGAGTTGCTTTAATT
TTAACAACACCATTTTTGTTTGATACAAAGCTGCTTATAATAAAAATTATAACAATAGGAGCAATTCTTCCTACTCCTAT
GGTAGCAGTAATTTATGCCAAGGAAAGAGGACTAAATGCTAAGTTGGCTTCTGTTTTTATTACCGCTTCAATTATTATAA
GCATTTTACTTATGACTTATATAATGCTTAGATGGCAATAA

Upstream 100 bases:

>100_bases
TTCCCACTATTTAAAGGCAGTTAGAACTTAGGTTATTGGAAAATAAATTAATTGGTTTTAGATGTTTTTATGCAATAGAA
TAGACTTTGGGGTGCGTTAA

Downstream 100 bases:

>100_bases
AGGGGAGTAAGGTTTATATATTCCTTACTCCCCTTTTTAATTTATCTATTTCTTTTCTAAAGTATATATACATTATGCTT
CCTTCAAACGCCCATTGGAT

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNQLMIQEKIFLNIAVLFLGYFIKKSRKFPENSGDVLSKIVLYITLPATILTIFSQYKIDARLFILTFISIILGVLTFIF
GYFVVKKVNLDNSDKWTLLVSICGYNIGLFALPFIQQVYGNEGIINMAMFDMGNSFIVFGFAYGVSFLAGGKTNFNLKEV
SKKIIYFFPLDVYISALLMNLFNINFTGMTKEFIYQLSLPNNVLALFTIGYFLDFNLNKNELKALIIGLFVKFLPGVALI
LTTPFLFDTKLLIIKIITIGAILPTPMVAVIYAKERGLNAKLASVFITASIIISILLMTYIMLRWQ

Sequences:

>Translated_306_residues
MNQLMIQEKIFLNIAVLFLGYFIKKSRKFPENSGDVLSKIVLYITLPATILTIFSQYKIDARLFILTFISIILGVLTFIF
GYFVVKKVNLDNSDKWTLLVSICGYNIGLFALPFIQQVYGNEGIINMAMFDMGNSFIVFGFAYGVSFLAGGKTNFNLKEV
SKKIIYFFPLDVYISALLMNLFNINFTGMTKEFIYQLSLPNNVLALFTIGYFLDFNLNKNELKALIIGLFVKFLPGVALI
LTTPFLFDTKLLIIKIITIGAILPTPMVAVIYAKERGLNAKLASVFITASIIISILLMTYIMLRWQ
>Mature_306_residues
MNQLMIQEKIFLNIAVLFLGYFIKKSRKFPENSGDVLSKIVLYITLPATILTIFSQYKIDARLFILTFISIILGVLTFIF
GYFVVKKVNLDNSDKWTLLVSICGYNIGLFALPFIQQVYGNEGIINMAMFDMGNSFIVFGFAYGVSFLAGGKTNFNLKEV
SKKIIYFFPLDVYISALLMNLFNINFTGMTKEFIYQLSLPNNVLALFTIGYFLDFNLNKNELKALIIGLFVKFLPGVALI
LTTPFLFDTKLLIIKIITIGAILPTPMVAVIYAKERGLNAKLASVFITASIIISILLMTYIMLRWQ

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 34616; Mature: 34616

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLMIQEKIFLNIAVLFLGYFIKKSRKFPENSGDVLSKIVLYITLPATILTIFSQYKID
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
ARLFILTFISIILGVLTFIFGYFVVKKVNLDNSDKWTLLVSICGYNIGLFALPFIQQVYG
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
NEGIINMAMFDMGNSFIVFGFAYGVSFLAGGKTNFNLKEVSKKIIYFFPLDVYISALLMN
CCCEEEEEEECCCCCEEEEEHHHHHHHHCCCCCCCCHHHHHHHEEEEEEHHHHHHHHHHH
LFNINFTGMTKEFIYQLSLPNNVLALFTIGYFLDFNLNKNELKALIIGLFVKFLPGVALI
HHCCCCCCCCHHHHEEECCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCEEH
LTTPFLFDTKLLIIKIITIGAILPTPMVAVIYAKERGLNAKLASVFITASIIISILLMTY
HHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
IMLRWQ
HHHCCC
>Mature Secondary Structure
MNQLMIQEKIFLNIAVLFLGYFIKKSRKFPENSGDVLSKIVLYITLPATILTIFSQYKID
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
ARLFILTFISIILGVLTFIFGYFVVKKVNLDNSDKWTLLVSICGYNIGLFALPFIQQVYG
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
NEGIINMAMFDMGNSFIVFGFAYGVSFLAGGKTNFNLKEVSKKIIYFFPLDVYISALLMN
CCCEEEEEEECCCCCEEEEEHHHHHHHHCCCCCCCCHHHHHHHEEEEEEHHHHHHHHHHH
LFNINFTGMTKEFIYQLSLPNNVLALFTIGYFLDFNLNKNELKALIIGLFVKFLPGVALI
HHCCCCCCCCHHHHEEECCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCEEH
LTTPFLFDTKLLIIKIITIGAILPTPMVAVIYAKERGLNAKLASVFITASIIISILLMTY
HHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
IMLRWQ
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]