| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is yhbJ [C]
Identifier: 167039823
GI number: 167039823
Start: 1213564
End: 1214418
Strand: Direct
Name: yhbJ [C]
Synonym: Teth514_1178
Alternate gene names: 167039823
Gene position: 1213564-1214418 (Clockwise)
Preceding gene: 167039822
Following gene: 167039824
Centisome position: 49.39
GC content: 33.45
Gene sequence:
>855_bases ATGAGGTTTGTCATAATAACAGGGCTTTCTGGCGCTGGAAAAACACAGGCATTAAAAGCGATGGAGGATATGGGCTTTTT TTGTATAGATAATTTTCCACCTGCTCTTCTTCCAAAACTTGCTGACCTTTTTTATCACTCAAAAAATGTTGATAAGGTAG CCCTTGGTATGGATTTAAGAGGTGGCCAGTTTTTTGAGGACATCTATTCTAGCCTTGAGTTTTTGAAAAAAAACAACTAC GATTACGAAATAGTTTTTTTGGAAGCTTCTGACGAGGTTTTGATAAAGAGGTTTAAAGAAACCAGAAGAAAACATCCTCT CTCTGAGGAAGGTAGAATAGTTGATGGAATAAATGAGGAAAGAAAGAGACTTGCAGAAATAAGGAAAATTGCCAATAGCA TAATAGATACTTCTAATTTAACTTCTTCCCAGTTAAAAGAGGAATTGTCTAATATCTTTTTAAAAGGGAAAAAGTTTAAA GGAATCATAATAGATATTATGTCTTTTGGATATAAATATGGAATACCTCTTGATGCTGACCTTGTATTTGATGTGAGGTT TTTGCCTAATCCTTTTTATATTGAAGAGTTAAGACCTTTAACAGGAAATGATGATAAGGTAAAAGAGTACGTGATGAAGT GGGAGGAAGCAAAGGAGTTTTTAAAAAAATTAGGGGACATGATTAAATTTTTAATCCCGTATTATATAAGAGAAGGTAAA TCTCAACTTGTTATAGCTATTGGATGCACAGGAGGAAAGCATAGGTCTGTTACTATTGCAAATGCCCTTTATGAGTTTCT AAAAAAAGAAGATTATTCTGTTATTTTGCACCATAGAGATATAGGAGAGGAGTAA
Upstream 100 bases:
>100_bases ATACGCCTCATAAAGTAGGAGACTTTAAAAGGGGAATAGAAATAGCAAAAGAGGCGGGACTAACAGAAGAAGATATAATA AACGCAAAGAGGTGATATTT
Downstream 100 bases:
>100_bases TATGATTATGAAAAATAATTCTAAAGGAGGACCTCGTATTGTTGCTATTGGTGGAGGTACAGGGCTTTCTACTATGTTGA GGGGGTTAAAATTTTATACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MRFVIITGLSGAGKTQALKAMEDMGFFCIDNFPPALLPKLADLFYHSKNVDKVALGMDLRGGQFFEDIYSSLEFLKKNNY DYEIVFLEASDEVLIKRFKETRRKHPLSEEGRIVDGINEERKRLAEIRKIANSIIDTSNLTSSQLKEELSNIFLKGKKFK GIIIDIMSFGYKYGIPLDADLVFDVRFLPNPFYIEELRPLTGNDDKVKEYVMKWEEAKEFLKKLGDMIKFLIPYYIREGK SQLVIAIGCTGGKHRSVTIANALYEFLKKEDYSVILHHRDIGEE
Sequences:
>Translated_284_residues MRFVIITGLSGAGKTQALKAMEDMGFFCIDNFPPALLPKLADLFYHSKNVDKVALGMDLRGGQFFEDIYSSLEFLKKNNY DYEIVFLEASDEVLIKRFKETRRKHPLSEEGRIVDGINEERKRLAEIRKIANSIIDTSNLTSSQLKEELSNIFLKGKKFK GIIIDIMSFGYKYGIPLDADLVFDVRFLPNPFYIEELRPLTGNDDKVKEYVMKWEEAKEFLKKLGDMIKFLIPYYIREGK SQLVIAIGCTGGKHRSVTIANALYEFLKKEDYSVILHHRDIGEE >Mature_284_residues MRFVIITGLSGAGKTQALKAMEDMGFFCIDNFPPALLPKLADLFYHSKNVDKVALGMDLRGGQFFEDIYSSLEFLKKNNY DYEIVFLEASDEVLIKRFKETRRKHPLSEEGRIVDGINEERKRLAEIRKIANSIIDTSNLTSSQLKEELSNIFLKGKKFK GIIIDIMSFGYKYGIPLDADLVFDVRFLPNPFYIEELRPLTGNDDKVKEYVMKWEEAKEFLKKLGDMIKFLIPYYIREGK SQLVIAIGCTGGKHRSVTIANALYEFLKKEDYSVILHHRDIGEE
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=286, Percent_Identity=38.1118881118881, Blast_Score=200, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1178_THEPX (B0K6J6)
Other databases:
- EMBL: CP000923 - RefSeq: YP_001662808.1 - ProteinModelPortal: B0K6J6 - GeneID: 5876267 - GenomeReviews: CP000923_GR - KEGG: tex:Teth514_1178 - HOGENOM: HBG289732 - OMA: GIGCTGG - ProtClustDB: PRK05416 - BioCyc: TSP1755:TETH514_1178-MONOMER - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 32719; Mature: 32719
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFVIITGLSGAGKTQALKAMEDMGFFCIDNFPPALLPKLADLFYHSKNVDKVALGMDLR CEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCC GGQFFEDIYSSLEFLKKNNYDYEIVFLEASDEVLIKRFKETRRKHPLSEEGRIVDGINEE CCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEECCCCHH RKRLAEIRKIANSIIDTSNLTSSQLKEELSNIFLKGKKFKGIIIDIMSFGYKYGIPLDAD HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEECCCCCCCC LVFDVRFLPNPFYIEELRPLTGNDDKVKEYVMKWEEAKEFLKKLGDMIKFLIPYYIREGK EEEEEEECCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SQLVIAIGCTGGKHRSVTIANALYEFLKKEDYSVILHHRDIGEE CEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEEECCCCCC >Mature Secondary Structure MRFVIITGLSGAGKTQALKAMEDMGFFCIDNFPPALLPKLADLFYHSKNVDKVALGMDLR CEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCC GGQFFEDIYSSLEFLKKNNYDYEIVFLEASDEVLIKRFKETRRKHPLSEEGRIVDGINEE CCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEECCCCHH RKRLAEIRKIANSIIDTSNLTSSQLKEELSNIFLKGKKFKGIIIDIMSFGYKYGIPLDAD HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEECCCCCCCC LVFDVRFLPNPFYIEELRPLTGNDDKVKEYVMKWEEAKEFLKKLGDMIKFLIPYYIREGK EEEEEEECCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SQLVIAIGCTGGKHRSVTIANALYEFLKKEDYSVILHHRDIGEE CEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA