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The map label for this gene is ycdX [C]

Identifier: 167039822

GI number: 167039822

Start: 1212827

End: 1213558

Strand: Direct

Name: ycdX [C]

Synonym: Teth514_1177

Alternate gene names: 167039822

Gene position: 1212827-1213558 (Clockwise)

Preceding gene: 167039821

Following gene: 167039823

Centisome position: 49.36

GC content: 34.7

Gene sequence:

>732_bases
ATGAGAATTTTTGCTGATTATCACACCCATACGGTATACAGCCATGGCAAAGGTACAATAGAGGATAATGTGAAAAGGGC
AATAGAAATTGGACTTGAGGTAATTGCGATTACTGACCATGGACCAGCTCATGTATTTTATGGTTTAAGAAAAAGGGATT
TTAAAAAAATGAGGGAGGAAATAGATAAGATTAATGAAAAATATCCTCAAATTAAAGTGCTGATGGGAGTAGAAGCTAAT
TTAATCAGCTTAGAAGGAGATATTGATGTTCCAGATGAACTTATGAAATATTTAGATATTTTGCTTATGGGATATCATGA
AGGAGTTATGCCTAAAGACTTTAGAAGTACTTTACAGCTTTTTGGTAAGAACATGGCAAGTAAATATTTTATTTCCTTGC
GGGAAGAGATGAGAGAAAAAAATACTCAAGCGATGATTAATGCTATAAAAAAGTACAAAATTGACATAATAACACACCCC
GGAGCAAAAGTAGACATTGATACACAAAAGCTTGCAAAGGCAGCAAAAGAGAAAGGAACGGCTCTTGAGATTAATTCTAG
TCATGGTTATATGACAGTTGAATATGTAAAGATAGCCAAAAAAGAGGGGTGCAAATTTGTAATAAACAGCGATGCCCATA
CGCCTCATAAAGTAGGAGACTTTAAAAGGGGAATAGAAATAGCAAAAGAGGCGGGACTAACAGAAGAAGATATAATAAAC
GCAAAGAGGTGA

Upstream 100 bases:

>100_bases
AAATTTGATTGAGCATATACAAAAAGTAGTAAAAGAAAAGTTTGGAGTGGAACTTGTACCAGAAATAAAAATAGTAGGAG
AGAAATAGGTGATTAGACAA

Downstream 100 bases:

>100_bases
TATTTATGAGGTTTGTCATAATAACAGGGCTTTCTGGCGCTGGAAAAACACAGGCATTAAAAGCGATGGAGGATATGGGC
TTTTTTTGTATAGATAATTT

Product: phosphotransferase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MRIFADYHTHTVYSHGKGTIEDNVKRAIEIGLEVIAITDHGPAHVFYGLRKRDFKKMREEIDKINEKYPQIKVLMGVEAN
LISLEGDIDVPDELMKYLDILLMGYHEGVMPKDFRSTLQLFGKNMASKYFISLREEMREKNTQAMINAIKKYKIDIITHP
GAKVDIDTQKLAKAAKEKGTALEINSSHGYMTVEYVKIAKKEGCKFVINSDAHTPHKVGDFKRGIEIAKEAGLTEEDIIN
AKR

Sequences:

>Translated_243_residues
MRIFADYHTHTVYSHGKGTIEDNVKRAIEIGLEVIAITDHGPAHVFYGLRKRDFKKMREEIDKINEKYPQIKVLMGVEAN
LISLEGDIDVPDELMKYLDILLMGYHEGVMPKDFRSTLQLFGKNMASKYFISLREEMREKNTQAMINAIKKYKIDIITHP
GAKVDIDTQKLAKAAKEKGTALEINSSHGYMTVEYVKIAKKEGCKFVINSDAHTPHKVGDFKRGIEIAKEAGLTEEDIIN
AKR
>Mature_243_residues
MRIFADYHTHTVYSHGKGTIEDNVKRAIEIGLEVIAITDHGPAHVFYGLRKRDFKKMREEIDKINEKYPQIKVLMGVEAN
LISLEGDIDVPDELMKYLDILLMGYHEGVMPKDFRSTLQLFGKNMASKYFISLREEMREKNTQAMINAIKKYKIDIITHP
GAKVDIDTQKLAKAAKEKGTALEINSSHGYMTVEYVKIAKKEGCKFVINSDAHTPHKVGDFKRGIEIAKEAGLTEEDIIN
AKR

Specific function: Unknown

COG id: COG1387

COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHP family [H]

Homologues:

Organism=Escherichia coli, GI1787271, Length=251, Percent_Identity=28.6852589641434, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 27655; Mature: 27655

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFADYHTHTVYSHGKGTIEDNVKRAIEIGLEVIAITDHGPAHVFYGLRKRDFKKMREE
CEEEECCCCEEEEECCCCCHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
IDKINEKYPQIKVLMGVEANLISLEGDIDVPDELMKYLDILLMGYHEGVMPKDFRSTLQL
HHHHHHCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FGKNMASKYFISLREEMREKNTQAMINAIKKYKIDIITHPGAKVDIDTQKLAKAAKEKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCHHHHHHHHHHCCC
ALEINSSHGYMTVEYVKIAKKEGCKFVINSDAHTPHKVGDFKRGIEIAKEAGLTEEDIIN
EEEEECCCCEEEEHHEEHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCC
AKR
CCC
>Mature Secondary Structure
MRIFADYHTHTVYSHGKGTIEDNVKRAIEIGLEVIAITDHGPAHVFYGLRKRDFKKMREE
CEEEECCCCEEEEECCCCCHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
IDKINEKYPQIKVLMGVEANLISLEGDIDVPDELMKYLDILLMGYHEGVMPKDFRSTLQL
HHHHHHCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FGKNMASKYFISLREEMREKNTQAMINAIKKYKIDIITHPGAKVDIDTQKLAKAAKEKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCHHHHHHHHHHCCC
ALEINSSHGYMTVEYVKIAKKEGCKFVINSDAHTPHKVGDFKRGIEIAKEAGLTEEDIIN
EEEEECCCCEEEEHHEEHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCC
AKR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA