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The map label for this gene is amyC [H]

Identifier: 167039766

GI number: 167039766

Start: 1160262

End: 1161089

Strand: Direct

Name: amyC [H]

Synonym: Teth514_1117

Alternate gene names: 167039766

Gene position: 1160262-1161089 (Clockwise)

Preceding gene: 167039765

Following gene: 167039767

Centisome position: 47.22

GC content: 32.0

Gene sequence:

>828_bases
ATGGAAAAGAATAATCGCCTACTTGGTGGAATAAAATTTTTTGCTTTAAGTATTTTTTTGGTACTTTATATATTTCCATT
TTTTATAGTTTTAATTAATTCCTTTAAAGAGAGAAAGGAAATACTAGAAAACCCACTCAAGCTTCCGTCGGTGCTGAATT
TAAGCAATTACATTGATGCTTTTACAAAAATGAATTATCTACATGCTTTTTTGAATTCTTTGATTATAACTGCTTTTAGT
GTATTTTTGATTACATTGCTGTCATCAATGACTGCTTATATTTTTGTAAGAAAAAAGTGGAAATTCAATCAGTTTATGTT
CTTTTTTATGGTGGCATCTATGATTATTCCTTTCCAAGGGATAATGATACCCCTTGTAAAAATATATGGTTCTATCGGCA
TGATGAATAGCAAATGGGCATTGATTTATATGTATGTAGGTTTTGGTGCATCTTTGGCCGTATTTATGTATCACGGTTTT
ATAAAGAGTATACCATTGGAATTAGAAGAGGCTGCTACTATTGATGGGTGCAGCCAGCTTCAGACTTTCTTTAAAATTGT
TTTTCCGCTTTTGAAGCCAGTAACAACAACAATAGCTATATTGGATATTTTGTGGATATGGAATGACTTTCTATTGCCAT
ATTTAGTACTCATGGCGCCAGAGCAGAGAACTTTACCGCTTTCTGTTTTCTATTTTTATGGAACTTACACGATTGAATAT
GGGCCTGCTATGGCAGCTCTTATGTTAGCTACAATTCCTGTAATAATTGCATATTTACTAATGCAAAAGCAGATTATAGA
AGGCGTTTTAAAGGGTTCAATAAAATAA

Upstream 100 bases:

>100_bases
ATGGTATTGGTCAAGCAGAGGCGTTTTTTCTCTTTTTTGTGGTAGCGGCTGTCACGTTGCTTCAAGTGTATTTTAGCAAA
AAGCTGGAGGTGGAAAATTG

Downstream 100 bases:

>100_bases
AGGTCTGGAGGTAGTAGAATTGGAATTGAGAAATATAAATGATGCAAATAAGTATATTCAAGCAAATAAGAGTAGATTAA
ATTTACAGTATAGATTGAAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MEKNNRLLGGIKFFALSIFLVLYIFPFFIVLINSFKERKEILENPLKLPSVLNLSNYIDAFTKMNYLHAFLNSLIITAFS
VFLITLLSSMTAYIFVRKKWKFNQFMFFFMVASMIIPFQGIMIPLVKIYGSIGMMNSKWALIYMYVGFGASLAVFMYHGF
IKSIPLELEEAATIDGCSQLQTFFKIVFPLLKPVTTTIAILDILWIWNDFLLPYLVLMAPEQRTLPLSVFYFYGTYTIEY
GPAMAALMLATIPVIIAYLLMQKQIIEGVLKGSIK

Sequences:

>Translated_275_residues
MEKNNRLLGGIKFFALSIFLVLYIFPFFIVLINSFKERKEILENPLKLPSVLNLSNYIDAFTKMNYLHAFLNSLIITAFS
VFLITLLSSMTAYIFVRKKWKFNQFMFFFMVASMIIPFQGIMIPLVKIYGSIGMMNSKWALIYMYVGFGASLAVFMYHGF
IKSIPLELEEAATIDGCSQLQTFFKIVFPLLKPVTTTIAILDILWIWNDFLLPYLVLMAPEQRTLPLSVFYFYGTYTIEY
GPAMAALMLATIPVIIAYLLMQKQIIEGVLKGSIK
>Mature_275_residues
MEKNNRLLGGIKFFALSIFLVLYIFPFFIVLINSFKERKEILENPLKLPSVLNLSNYIDAFTKMNYLHAFLNSLIITAFS
VFLITLLSSMTAYIFVRKKWKFNQFMFFFMVASMIIPFQGIMIPLVKIYGSIGMMNSKWALIYMYVGFGASLAVFMYHGF
IKSIPLELEEAATIDGCSQLQTFFKIVFPLLKPVTTTIAILDILWIWNDFLLPYLVLMAPEQRTLPLSVFYFYGTYTIEY
GPAMAALMLATIPVIIAYLLMQKQIIEGVLKGSIK

Specific function: Probably part of a binding-protein-dependent transport system starch degradation products. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=286, Percent_Identity=32.1678321678322, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1789860, Length=265, Percent_Identity=24.1509433962264, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790464, Length=210, Percent_Identity=24.7619047619048, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31587; Mature: 31587

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNNRLLGGIKFFALSIFLVLYIFPFFIVLINSFKERKEILENPLKLPSVLNLSNYIDA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FTKMNYLHAFLNSLIITAFSVFLITLLSSMTAYIFVRKKWKFNQFMFFFMVASMIIPFQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IMIPLVKIYGSIGMMNSKWALIYMYVGFGASLAVFMYHGFIKSIPLELEEAATIDGCSQL
HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHH
QTFFKIVFPLLKPVTTTIAILDILWIWNDFLLPYLVLMAPEQRTLPLSVFYFYGTYTIEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEH
GPAMAALMLATIPVIIAYLLMQKQIIEGVLKGSIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEKNNRLLGGIKFFALSIFLVLYIFPFFIVLINSFKERKEILENPLKLPSVLNLSNYIDA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FTKMNYLHAFLNSLIITAFSVFLITLLSSMTAYIFVRKKWKFNQFMFFFMVASMIIPFQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IMIPLVKIYGSIGMMNSKWALIYMYVGFGASLAVFMYHGFIKSIPLELEEAATIDGCSQL
HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHH
QTFFKIVFPLLKPVTTTIAILDILWIWNDFLLPYLVLMAPEQRTLPLSVFYFYGTYTIEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEH
GPAMAALMLATIPVIIAYLLMQKQIIEGVLKGSIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1874408; 1854207 [H]