| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is yqjI [H]
Identifier: 167039731
GI number: 167039731
Start: 1117098
End: 1118504
Strand: Direct
Name: yqjI [H]
Synonym: Teth514_1081
Alternate gene names: 167039731
Gene position: 1117098-1118504 (Clockwise)
Preceding gene: 167039730
Following gene: 167039732
Centisome position: 45.46
GC content: 34.68
Gene sequence:
>1407_bases ATGAAAGACATTGGATTAATTGGATTGGCAGTAATGGGACAAAATCTTGCTCTAAATATTGCGAGGAAAAAGTATAGTGT ATCTGTTTTTAACAGGACACCTGATAGAACACAAGAATTTATGAAAAACAAAGTAAAAGACGAAGAAATCGCAGCTTATT ATGATATCAAGTCTTTTGTAGAATCTTTAAAAAAGCCGCGAAAAATCATCCTCATGGTTAAAGCAGGAAAACCAGTAGAT GAAATGATTCAAGAACTTTTACCTTATCTAGATAAGGGAGATTTGATTATTGATGGAGGAAATTCCTACTTTAAAGATAC CTCCAGGAGAATTAATGAATTAAAAGAAAGAGGCATATTGTACCTTGGAATGGGAGTGTCAGGAGGAGAAGCCGGAGCTT TACACGGGCCTTCTTTGATGCCAGGGGGATCTTACGATGCTTATGAGATGGTAAAAGAAATTCTTTTAAAAATTGCTGCT CAGACGGAAGCAGGTCCTTGCTGTACATACGTTGGAAATGATTCTGCAGGACACTTTGTCAAAATGGTTCACAACGGTAT AGAATATGCCATAATGCAAGCAATAGCTGAGGTTTACGATGTACTTCGAAAGGTGTTAAAACTTTCTCCCGAAGAGATAG GAGAGATATTTGAAAAATGGAATAATGGGGTGTTAAACTCCTTCCTGATGGAAATTTCTTATAAAATAATGAAGTACAAA GACAAAGAAACAGGAAAATACCTCGTTGACCTCATATTAGACGAAGCAGAACAAAAAGGCACAGGCAAGTGGACTTCTCA AACTTCTTTGGATTTAGGAATCCCAACTCCTTCTTTAAATCTTGCAGTAGAAGCAAGAACTTTGTCTTTCTTTAAAGAGG CGAGAGTAGAATTGTCTAAAAAAGTAACAAAAACTTATCCTAGCATTAAGGTGGACAAAGAGAAAGTAATAAATGATTTG GAGAATGCATTGCTTTTTAGTGTTTTCGTCTCTTTTTCTCAAGGACTATGGCTTATATCTGAGGCTTCAAAGGCTTTTAA CTATAACATTGACCTTTCAGAAGTTTTAAGAATTTGGAAAGGCGGATGCATCATAAGAGCCAAAATTTTAGATTTCTTAA GAGACATTATTAAAGAAAATAAAGAAAATGTAAATCTTCTTAACAGTGAAAAGGCGTTATCTTTCTTAATGGATAAAATT GATTCAATAAAATATATCACTAATTTAACAAAAGATTTTTACCTTCCAACGCTTGTACTTAATTCTTCATTAGATTATTT CTTGAGCATGATAGAAGAAAACTTGCCTGCTAATCTAATCCAAGCTCAAAGAGATTTCTTCGGTGCTCACACTTACAGAA GAATAGACAAAGAGGGAATTTTCCACACTGAATGGGAGGCAAACTAA
Upstream 100 bases:
>100_bases TGGCTTATGACCCTAATCTTTCACCTGAAAACTTTGACAAAAGAACTTAAAAAATTATTTGAACTGCACACTAAATTATA AAAAACGAGGAGGTAATTAG
Downstream 100 bases:
>100_bases AACCTAATTGACATCATTTAGTTAATGTTGAATTAATGGGAGTTTTTTGCTCCCCATTTTCTTTCAATAAAAATTCAATA AAAAAATTTAAAAATCAAGA
Product: 6-phosphogluconate dehydrogenase
Products: NA
Alternate protein names: GNTZII [H]
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MKDIGLIGLAVMGQNLALNIARKKYSVSVFNRTPDRTQEFMKNKVKDEEIAAYYDIKSFVESLKKPRKIILMVKAGKPVD EMIQELLPYLDKGDLIIDGGNSYFKDTSRRINELKERGILYLGMGVSGGEAGALHGPSLMPGGSYDAYEMVKEILLKIAA QTEAGPCCTYVGNDSAGHFVKMVHNGIEYAIMQAIAEVYDVLRKVLKLSPEEIGEIFEKWNNGVLNSFLMEISYKIMKYK DKETGKYLVDLILDEAEQKGTGKWTSQTSLDLGIPTPSLNLAVEARTLSFFKEARVELSKKVTKTYPSIKVDKEKVINDL ENALLFSVFVSFSQGLWLISEASKAFNYNIDLSEVLRIWKGGCIIRAKILDFLRDIIKENKENVNLLNSEKALSFLMDKI DSIKYITNLTKDFYLPTLVLNSSLDYFLSMIEENLPANLIQAQRDFFGAHTYRRIDKEGIFHTEWEAN
Sequences:
>Translated_468_residues MKDIGLIGLAVMGQNLALNIARKKYSVSVFNRTPDRTQEFMKNKVKDEEIAAYYDIKSFVESLKKPRKIILMVKAGKPVD EMIQELLPYLDKGDLIIDGGNSYFKDTSRRINELKERGILYLGMGVSGGEAGALHGPSLMPGGSYDAYEMVKEILLKIAA QTEAGPCCTYVGNDSAGHFVKMVHNGIEYAIMQAIAEVYDVLRKVLKLSPEEIGEIFEKWNNGVLNSFLMEISYKIMKYK DKETGKYLVDLILDEAEQKGTGKWTSQTSLDLGIPTPSLNLAVEARTLSFFKEARVELSKKVTKTYPSIKVDKEKVINDL ENALLFSVFVSFSQGLWLISEASKAFNYNIDLSEVLRIWKGGCIIRAKILDFLRDIIKENKENVNLLNSEKALSFLMDKI DSIKYITNLTKDFYLPTLVLNSSLDYFLSMIEENLPANLIQAQRDFFGAHTYRRIDKEGIFHTEWEAN >Mature_468_residues MKDIGLIGLAVMGQNLALNIARKKYSVSVFNRTPDRTQEFMKNKVKDEEIAAYYDIKSFVESLKKPRKIILMVKAGKPVD EMIQELLPYLDKGDLIIDGGNSYFKDTSRRINELKERGILYLGMGVSGGEAGALHGPSLMPGGSYDAYEMVKEILLKIAA QTEAGPCCTYVGNDSAGHFVKMVHNGIEYAIMQAIAEVYDVLRKVLKLSPEEIGEIFEKWNNGVLNSFLMEISYKIMKYK DKETGKYLVDLILDEAEQKGTGKWTSQTSLDLGIPTPSLNLAVEARTLSFFKEARVELSKKVTKTYPSIKVDKEKVINDL ENALLFSVFVSFSQGLWLISEASKAFNYNIDLSEVLRIWKGGCIIRAKILDFLRDIIKENKENVNLLNSEKALSFLMDKI DSIKYITNLTKDFYLPTLVLNSSLDYFLSMIEENLPANLIQAQRDFFGAHTYRRIDKEGIFHTEWEAN
Specific function: Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH [H]
COG id: COG0362
COG function: function code G; 6-phosphogluconate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 6-phosphogluconate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI40068518, Length=469, Percent_Identity=44.3496801705757, Blast_Score=390, Evalue=1e-108, Organism=Escherichia coli, GI1788341, Length=465, Percent_Identity=48.6021505376344, Blast_Score=448, Evalue=1e-127, Organism=Caenorhabditis elegans, GI17542558, Length=467, Percent_Identity=43.8972162740899, Blast_Score=416, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6321695, Length=453, Percent_Identity=46.5783664459161, Blast_Score=426, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6321977, Length=453, Percent_Identity=45.6953642384106, Blast_Score=398, Evalue=1e-111, Organism=Drosophila melanogaster, GI24639279, Length=467, Percent_Identity=43.6830835117773, Blast_Score=375, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR006114 - InterPro: IPR006113 - InterPro: IPR006115 - InterPro: IPR006184 - InterPro: IPR013328 - InterPro: IPR012284 - InterPro: IPR016040 - InterPro: IPR006183 [H]
Pfam domain/function: PF00393 6PGD; PF03446 NAD_binding_2 [H]
EC number: =1.1.1.44 [H]
Molecular weight: Translated: 52973; Mature: 52973
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00461 6PGD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIGLIGLAVMGQNLALNIARKKYSVSVFNRTPDRTQEFMKNKVKDEEIAAYYDIKSFV CCCCCEEHHHHHCCCCEEEEEHHEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHH ESLKKPRKIILMVKAGKPVDEMIQELLPYLDKGDLIIDGGNSYFKDTSRRINELKERGIL HHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCEE YLGMGVSGGEAGALHGPSLMPGGSYDAYEMVKEILLKIAAQTEAGPCCTYVGNDSAGHFV EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHH KMVHNGIEYAIMQAIAEVYDVLRKVLKLSPEEIGEIFEKWNNGVLNSFLMEISYKIMKYK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC DKETGKYLVDLILDEAEQKGTGKWTSQTSLDLGIPTPSLNLAVEARTLSFFKEARVELSK CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHH KVTKTYPSIKVDKEKVINDLENALLFSVFVSFSQGLWLISEASKAFNYNIDLSEVLRIWK HHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCHHHHHHHHC GGCIIRAKILDFLRDIIKENKENVNLLNSEKALSFLMDKIDSIKYITNLTKDFYLPTLVL CCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSSLDYFLSMIEENLPANLIQAQRDFFGAHTYRRIDKEGIFHTEWEAN HCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC >Mature Secondary Structure MKDIGLIGLAVMGQNLALNIARKKYSVSVFNRTPDRTQEFMKNKVKDEEIAAYYDIKSFV CCCCCEEHHHHHCCCCEEEEEHHEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHH ESLKKPRKIILMVKAGKPVDEMIQELLPYLDKGDLIIDGGNSYFKDTSRRINELKERGIL HHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCEE YLGMGVSGGEAGALHGPSLMPGGSYDAYEMVKEILLKIAAQTEAGPCCTYVGNDSAGHFV EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHH KMVHNGIEYAIMQAIAEVYDVLRKVLKLSPEEIGEIFEKWNNGVLNSFLMEISYKIMKYK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC DKETGKYLVDLILDEAEQKGTGKWTSQTSLDLGIPTPSLNLAVEARTLSFFKEARVELSK CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHH KVTKTYPSIKVDKEKVINDLENALLFSVFVSFSQGLWLISEASKAFNYNIDLSEVLRIWK HHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCHHHHHHHHC GGCIIRAKILDFLRDIIKENKENVNLLNSEKALSFLMDKIDSIKYITNLTKDFYLPTLVL CCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSSLDYFLSMIEENLPANLIQAQRDFFGAHTYRRIDKEGIFHTEWEAN HCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 10568751; 9298659 [H]