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The map label for this gene is ycjS [H]

Identifier: 167039723

GI number: 167039723

Start: 1109562

End: 1110650

Strand: Direct

Name: ycjS [H]

Synonym: Teth514_1073

Alternate gene names: 167039723

Gene position: 1109562-1110650 (Clockwise)

Preceding gene: 167039722

Following gene: 167039724

Centisome position: 45.15

GC content: 39.3

Gene sequence:

>1089_bases
ATGGTAAAAGAAAAACTTAGAGTAGGAATTATAGGTTGTGGAGGAATTGCTTTTGGTAAACACATGCCCTCTTTGGCAAA
ACTAGACAATATTGAAATGGTGGCCTTTTGTGACATCATAGAAGAGAGGGCTCAAAAAGCGGCAAAAGAATATGGTACAA
AAGACGCGAAAGTATATACGGATTACAAAAAACTTCTTGAAGATAAAACGATAGATGTGGTTCATGTTTGTACTCCCAAC
AAGTCTCATGCAGACATAACTGTTGATGCTCTTTATGCAGGAAAACATGTAATGTGTGAGAAGCCTATGGCTAAGACTGC
TGCAGATGCCAGAAGAATGGTGGAAGCATATAAGAAAACAGGTATGAAACTCACTATAGGGTATCAAAATCGCTTTAGAC
CAGATTCTCAATATTTACATAAAGTTTGTCAAAATGGTGAATTAGGGGAAATATATTTTGCTAAGGCTCATGCTATACGT
CGCCGCGCGGTACCTACATGGGGTGTTTTCTTAAATGAAGAAGAGCAAGGTGGTGGGCCTTTAATTGATATAGGAACACA
TGCCCTTGATTTGACATTGTGGATGATGAATAACTATAAGCCTAAAGTTGTAATGGGAAGCGCCTACTATAAATTAGGCA
AAAGAGCAAATGCTGCGAATGCTTGGGGGCCATGGGACCCTGAAAAGTTCACAGTTGAAGATTCAGCTTTTGGATTTATA
GTAATGGAGAATGGGGCTACCATTATATTAGAGTCCAGTTGGGCTTTGAATACTTTAGAAGTTGGCGAGGCTATGACCAC
TTTGTGTGGAACAGAAGGCGGAGCTGACATGAGAGATGGACTTCGCATAAATGGAGAGAAATTTGGAAGGCTTTATACAA
CTAAAGTTTCTACTGATGTAGGTGGAGTAGATTTCTATGAAGGTAAATCAGATGAGCCGGGATTTTTAGAAGCAAAAGCT
TGGATTGATTGCATCATAAACGATACAGAGCCGGTTGTAAAGCCAGAAGAAGCTCTTGTAGTAACTGAGATACTAGAGGC
TATTTATACATCTGCGAAAACAGGAGAACCAGTATATTTTAACAGGTAA

Upstream 100 bases:

>100_bases
TTTAGAACATGAGTTAATAATAAGAGAGTCGACAGTAAAATAAAGAATAAAGTTTTGTCTTAAAAATACAAATTTAAATA
TAATCATGGGAGGAATTTTT

Downstream 100 bases:

>100_bases
ATGGAGGCTTTTGTATGGAAAAACTTAAATATGCATGTGTTGGTGCAGGGTCAGTTGCTGATTACAAACACTTAAACGGT
TATTCAAAAGTAGAAGATGT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MVKEKLRVGIIGCGGIAFGKHMPSLAKLDNIEMVAFCDIIEERAQKAAKEYGTKDAKVYTDYKKLLEDKTIDVVHVCTPN
KSHADITVDALYAGKHVMCEKPMAKTAADARRMVEAYKKTGMKLTIGYQNRFRPDSQYLHKVCQNGELGEIYFAKAHAIR
RRAVPTWGVFLNEEEQGGGPLIDIGTHALDLTLWMMNNYKPKVVMGSAYYKLGKRANAANAWGPWDPEKFTVEDSAFGFI
VMENGATIILESSWALNTLEVGEAMTTLCGTEGGADMRDGLRINGEKFGRLYTTKVSTDVGGVDFYEGKSDEPGFLEAKA
WIDCIINDTEPVVKPEEALVVTEILEAIYTSAKTGEPVYFNR

Sequences:

>Translated_362_residues
MVKEKLRVGIIGCGGIAFGKHMPSLAKLDNIEMVAFCDIIEERAQKAAKEYGTKDAKVYTDYKKLLEDKTIDVVHVCTPN
KSHADITVDALYAGKHVMCEKPMAKTAADARRMVEAYKKTGMKLTIGYQNRFRPDSQYLHKVCQNGELGEIYFAKAHAIR
RRAVPTWGVFLNEEEQGGGPLIDIGTHALDLTLWMMNNYKPKVVMGSAYYKLGKRANAANAWGPWDPEKFTVEDSAFGFI
VMENGATIILESSWALNTLEVGEAMTTLCGTEGGADMRDGLRINGEKFGRLYTTKVSTDVGGVDFYEGKSDEPGFLEAKA
WIDCIINDTEPVVKPEEALVVTEILEAIYTSAKTGEPVYFNR
>Mature_362_residues
MVKEKLRVGIIGCGGIAFGKHMPSLAKLDNIEMVAFCDIIEERAQKAAKEYGTKDAKVYTDYKKLLEDKTIDVVHVCTPN
KSHADITVDALYAGKHVMCEKPMAKTAADARRMVEAYKKTGMKLTIGYQNRFRPDSQYLHKVCQNGELGEIYFAKAHAIR
RRAVPTWGVFLNEEEQGGGPLIDIGTHALDLTLWMMNNYKPKVVMGSAYYKLGKRANAANAWGPWDPEKFTVEDSAFGFI
VMENGATIILESSWALNTLEVGEAMTTLCGTEGGADMRDGLRINGEKFGRLYTTKVSTDVGGVDFYEGKSDEPGFLEAKA
WIDCIINDTEPVVKPEEALVVTEILEAIYTSAKTGEPVYFNR

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=206, Percent_Identity=30.0970873786408, Blast_Score=82, Evalue=8e-16,
Organism=Escherichia coli, GI1787574, Length=358, Percent_Identity=37.1508379888268, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI87081947, Length=192, Percent_Identity=30.2083333333333, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789848, Length=228, Percent_Identity=28.5087719298246, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787307, Length=131, Percent_Identity=30.5343511450382, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI87082405, Length=292, Percent_Identity=26.7123287671233, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323975, Length=201, Percent_Identity=25.3731343283582, Blast_Score=63, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24581117, Length=210, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40138; Mature: 40138

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKEKLRVGIIGCGGIAFGKHMPSLAKLDNIEMVAFCDIIEERAQKAAKEYGTKDAKVYT
CCCCCEEEEEEEECCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHH
DYKKLLEDKTIDVVHVCTPNKSHADITVDALYAGKHVMCEKPMAKTAADARRMVEAYKKT
HHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHC
GMKLTIGYQNRFRPDSQYLHKVCQNGELGEIYFAKAHAIRRRAVPTWGVFLNEEEQGGGP
CCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCCC
LIDIGTHALDLTLWMMNNYKPKVVMGSAYYKLGKRANAANAWGPWDPEKFTVEDSAFGFI
EEEECCCEEEEEEEEECCCCCEEEECHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEE
VMENGATIILESSWALNTLEVGEAMTTLCGTEGGADMRDGLRINGEKFGRLYTTKVSTDV
EEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCHHCCEEEEEEECCCC
GGVDFYEGKSDEPGFLEAKAWIDCIINDTEPVVKPEEALVVTEILEAIYTSAKTGEPVYF
CCEEECCCCCCCCCEEEHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
NR
CC
>Mature Secondary Structure
MVKEKLRVGIIGCGGIAFGKHMPSLAKLDNIEMVAFCDIIEERAQKAAKEYGTKDAKVYT
CCCCCEEEEEEEECCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHH
DYKKLLEDKTIDVVHVCTPNKSHADITVDALYAGKHVMCEKPMAKTAADARRMVEAYKKT
HHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHC
GMKLTIGYQNRFRPDSQYLHKVCQNGELGEIYFAKAHAIRRRAVPTWGVFLNEEEQGGGP
CCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCCC
LIDIGTHALDLTLWMMNNYKPKVVMGSAYYKLGKRANAANAWGPWDPEKFTVEDSAFGFI
EEEECCCEEEEEEEEECCCCCEEEECHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEE
VMENGATIILESSWALNTLEVGEAMTTLCGTEGGADMRDGLRINGEKFGRLYTTKVSTDV
EEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCHHCCEEEEEEECCCC
GGVDFYEGKSDEPGFLEAKAWIDCIINDTEPVVKPEEALVVTEILEAIYTSAKTGEPVYF
CCEEECCCCCCCCCEEEHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
NR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]