Click here to switch to the map view.

The map label for this gene is ycjS [H]

Identifier: 167039724

GI number: 167039724

Start: 1110665

End: 1111714

Strand: Direct

Name: ycjS [H]

Synonym: Teth514_1074

Alternate gene names: 167039724

Gene position: 1110665-1111714 (Clockwise)

Preceding gene: 167039723

Following gene: 167039725

Centisome position: 45.2

GC content: 35.71

Gene sequence:

>1050_bases
ATGGAAAAACTTAAATATGCATGTGTTGGTGCAGGGTCAGTTGCTGATTACAAACACTTAAACGGTTATTCAAAAGTAGA
AGATGTTGAAATTGTAGCCATATCTGATCCGGATATAGAGGCTGCAAAAAGATTAGCGGAAAAGTACAATATACCTCACG
TTTATACAGATTATGAAGAAATGTTTAAAAAAGAAAAACCAGACTTAATAAGCGTATGTACTCCTAATTATTTACATGCG
CCTATTTCTATAAAAGCGATGGAAAAGGGAATTCATGTGCATTGTGAAAAACCTATAACTCTAAATGCAAAAGAAGCTTA
TGAGGTCATTGAATCAAAAAATAAATACAAAAGGAAGTTTATGGTAGGATTAAATAATAGGTTTACAAATGAATCTTTCT
TTGTAAAAAGATATATAGAGGAAGGGTATATAGGCGAAATATACCATGTAAAGACTGGCTGGAGGAGAAGGAGAGGCATT
CCTGGAAAGGGCGGATGGTTTACAAATAAGAAATTGTCTGGAGGAGGCCCTCTCATTGACCTGGGAGTACATTTTTTAGA
CTTAGTCTTGTATTTCATGGGATACCCAGAGGTGCAATCTGTGTCAGCAGCTACTTATTCTAAGTTTTCAAATAGCAACA
GTTTAAACAGCTGGAATTATGCAAAAAGCGGGGATGGAATTTACGATGTGGAGGATATGGCAGTAGGCTTTGTAAGGCTT
AAAAATGGTGCCACAATTGACTTTGAATTCAGCTGGGCTTCCAACATTGAGGGAGATTACAATTACTATGAAATTTTAGG
TGATAAAGGTGGCATATGGTTTAAAAACGGACAGCTTAAAGTATTTTCGGAAATTGTTGATACATTGATTGACATAGTTC
CCGACACCAATTATCCAAAATCGCCTTTAAATGAATTTGAACATTTTGTTGACTGTATAAAAAATGACAAAGAGCCTTTG
GCTTCTGCTGAAGAAGGGGCAAAACTCATGGGAATAATAGACGGTGCCTATGAATCAGCTGAAAAAGGTAAGGAAATAGT
TTTAGGTTAA

Upstream 100 bases:

>100_bases
CAGAAGAAGCTCTTGTAGTAACTGAGATACTAGAGGCTATTTATACATCTGCGAAAACAGGAGAACCAGTATATTTTAAC
AGGTAAATGGAGGCTTTTGT

Downstream 100 bases:

>100_bases
AGGGGGAAAAAATTAAAATGAGTATACCTATAGCACTTCAACTTTACACTTTGAGAGAGGAGACACAAAAAGATTTTATA
GGTACTCTTGAAAAGGTTGC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MEKLKYACVGAGSVADYKHLNGYSKVEDVEIVAISDPDIEAAKRLAEKYNIPHVYTDYEEMFKKEKPDLISVCTPNYLHA
PISIKAMEKGIHVHCEKPITLNAKEAYEVIESKNKYKRKFMVGLNNRFTNESFFVKRYIEEGYIGEIYHVKTGWRRRRGI
PGKGGWFTNKKLSGGGPLIDLGVHFLDLVLYFMGYPEVQSVSAATYSKFSNSNSLNSWNYAKSGDGIYDVEDMAVGFVRL
KNGATIDFEFSWASNIEGDYNYYEILGDKGGIWFKNGQLKVFSEIVDTLIDIVPDTNYPKSPLNEFEHFVDCIKNDKEPL
ASAEEGAKLMGIIDGAYESAEKGKEIVLG

Sequences:

>Translated_349_residues
MEKLKYACVGAGSVADYKHLNGYSKVEDVEIVAISDPDIEAAKRLAEKYNIPHVYTDYEEMFKKEKPDLISVCTPNYLHA
PISIKAMEKGIHVHCEKPITLNAKEAYEVIESKNKYKRKFMVGLNNRFTNESFFVKRYIEEGYIGEIYHVKTGWRRRRGI
PGKGGWFTNKKLSGGGPLIDLGVHFLDLVLYFMGYPEVQSVSAATYSKFSNSNSLNSWNYAKSGDGIYDVEDMAVGFVRL
KNGATIDFEFSWASNIEGDYNYYEILGDKGGIWFKNGQLKVFSEIVDTLIDIVPDTNYPKSPLNEFEHFVDCIKNDKEPL
ASAEEGAKLMGIIDGAYESAEKGKEIVLG
>Mature_349_residues
MEKLKYACVGAGSVADYKHLNGYSKVEDVEIVAISDPDIEAAKRLAEKYNIPHVYTDYEEMFKKEKPDLISVCTPNYLHA
PISIKAMEKGIHVHCEKPITLNAKEAYEVIESKNKYKRKFMVGLNNRFTNESFFVKRYIEEGYIGEIYHVKTGWRRRRGI
PGKGGWFTNKKLSGGGPLIDLGVHFLDLVLYFMGYPEVQSVSAATYSKFSNSNSLNSWNYAKSGDGIYDVEDMAVGFVRL
KNGATIDFEFSWASNIEGDYNYYEILGDKGGIWFKNGQLKVFSEIVDTLIDIVPDTNYPKSPLNEFEHFVDCIKNDKEPL
ASAEEGAKLMGIIDGAYESAEKGKEIVLG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=354, Percent_Identity=33.3333333333333, Blast_Score=203, Evalue=2e-53,
Organism=Escherichia coli, GI87082405, Length=250, Percent_Identity=27.2, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI87081947, Length=223, Percent_Identity=24.2152466367713, Blast_Score=72, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24581117, Length=171, Percent_Identity=28.0701754385965, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39374; Mature: 39374

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLKYACVGAGSVADYKHLNGYSKVEDVEIVAISDPDIEAAKRLAEKYNIPHVYTDYEE
CCCCEEEEECCCCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEECCHHH
MFKKEKPDLISVCTPNYLHAPISIKAMEKGIHVHCEKPITLNAKEAYEVIESKNKYKRKF
HHHHCCCCEEEECCCCCEECCEEEEEECCCCEEEECCCEEECHHHHHHHHHCCHHHHHHE
MVGLNNRFTNESFFVKRYIEEGYIGEIYHVKTGWRRRRGIPGKGGWFTNKKLSGGGPLID
EEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCCCCCCEECCCCCCHH
LGVHFLDLVLYFMGYPEVQSVSAATYSKFSNSNSLNSWNYAKSGDGIYDVEDMAVGFVRL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHEEEEEE
KNGATIDFEFSWASNIEGDYNYYEILGDKGGIWFKNGQLKVFSEIVDTLIDIVPDTNYPK
CCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCC
SPLNEFEHFVDCIKNDKEPLASAEEGAKLMGIIDGAYESAEKGKEIVLG
CHHHHHHHHHHHHCCCCCHHCCHHCCCEEEEEEHHHHHHHHCCCEECCC
>Mature Secondary Structure
MEKLKYACVGAGSVADYKHLNGYSKVEDVEIVAISDPDIEAAKRLAEKYNIPHVYTDYEE
CCCCEEEEECCCCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEECCHHH
MFKKEKPDLISVCTPNYLHAPISIKAMEKGIHVHCEKPITLNAKEAYEVIESKNKYKRKF
HHHHCCCCEEEECCCCCEECCEEEEEECCCCEEEECCCEEECHHHHHHHHHCCHHHHHHE
MVGLNNRFTNESFFVKRYIEEGYIGEIYHVKTGWRRRRGIPGKGGWFTNKKLSGGGPLID
EEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCCCCCCEECCCCCCHH
LGVHFLDLVLYFMGYPEVQSVSAATYSKFSNSNSLNSWNYAKSGDGIYDVEDMAVGFVRL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHEEEEEE
KNGATIDFEFSWASNIEGDYNYYEILGDKGGIWFKNGQLKVFSEIVDTLIDIVPDTNYPK
CCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCC
SPLNEFEHFVDCIKNDKEPLASAEEGAKLMGIIDGAYESAEKGKEIVLG
CHHHHHHHHHHHHCCCCCHHCCHHCCCEEEEEEHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]