| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is yvjA [H]
Identifier: 167039619
GI number: 167039619
Start: 987438
End: 988283
Strand: Direct
Name: yvjA [H]
Synonym: Teth514_0967
Alternate gene names: 167039619
Gene position: 987438-988283 (Clockwise)
Preceding gene: 167039618
Following gene: 167039620
Centisome position: 40.18
GC content: 35.22
Gene sequence:
>846_bases ATGAAAATTACCGCTAAAAAAATAATAATAGATTTTTTTGGGGTTAGTGTAGGAACATTACTTGTGGCTTTATCCTTAGA TTTGTTTTTGGCACCTAACAAAATTGCTCCTGGTGGAGTAAGTGGACTTGCAGTTGTTCTACAACATTTGTTTGGATGGC CAATAGGAGCAGTTACCTTGGCAATAAATATTCCGCTTTTTATCATCTCGACTAAAGCTTTAGGAACAGGTTTTGGAGCT AAAACACTTTATTCAACTATTTTATTAGGTGTTTCTATTGATGCATTGGCTTTTTTAAAACCTCTTACCCATGATACAAT ATTGGCGGCAGTATATGGTGGTATAATAATGGGTGTAGGGATAGGTATTGTGATAAAATATGGAGCAACAACTGGTGGAA CAGACATGGCTGCTATGACTTTGCATAAATACATACACTTTTTAAGTGTGGGCAGAATACTGCTTATAATAGACTTTGTA ATAATAACTTTAGCAGGCATAGTTTTTAGCCCGGAACTTGCCCTTTATGCTTTAGCTACTGAATTTATTTCTATCAAAGT TATTGACCTCATACAAGAAGGTAGTGGCGATGAGAGAATTGCTATAATTATTTCTGATAGGTATGAGGAAATTAGTAAAT CAATATTGGAGGAAATGGAAAGGGGGGTAACAGAACTAAAAGGAAGAGGGGGTTATTCAAAAAAGGACAAAAATGTTTTG TTGTGTGTTGTAACTCGTAGAGAAGTTACAACCTTAAGAAGCCTTGTGAAAAGAATAGACCCCAACGCTTTCATGATATT ATCAACAGCCCATGAAGTTTTAGGAGAAGGATTTAAAAACATGTGA
Upstream 100 bases:
>100_bases TATTATTTGAGCACAATATTTCTTAAGCGAGGATGAAATAATAAGTCTTATAAAAGATTGCTACTATTCAAAAACTAACA GAATCTTTAAGGAGGATATT
Downstream 100 bases:
>100_bases AATGGAGGTATTGGTATGGACAAAGAATTTTTAAAGCAAAAGGCAAAAGAAGTGAGAATAGACATCATAAACATGTTGGC AGAAGCAGGATCTGGCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKITAKKIIIDFFGVSVGTLLVALSLDLFLAPNKIAPGGVSGLAVVLQHLFGWPIGAVTLAINIPLFIISTKALGTGFGA KTLYSTILLGVSIDALAFLKPLTHDTILAAVYGGIIMGVGIGIVIKYGATTGGTDMAAMTLHKYIHFLSVGRILLIIDFV IITLAGIVFSPELALYALATEFISIKVIDLIQEGSGDERIAIIISDRYEEISKSILEEMERGVTELKGRGGYSKKDKNVL LCVVTRREVTTLRSLVKRIDPNAFMILSTAHEVLGEGFKNM
Sequences:
>Translated_281_residues MKITAKKIIIDFFGVSVGTLLVALSLDLFLAPNKIAPGGVSGLAVVLQHLFGWPIGAVTLAINIPLFIISTKALGTGFGA KTLYSTILLGVSIDALAFLKPLTHDTILAAVYGGIIMGVGIGIVIKYGATTGGTDMAAMTLHKYIHFLSVGRILLIIDFV IITLAGIVFSPELALYALATEFISIKVIDLIQEGSGDERIAIIISDRYEEISKSILEEMERGVTELKGRGGYSKKDKNVL LCVVTRREVTTLRSLVKRIDPNAFMILSTAHEVLGEGFKNM >Mature_281_residues MKITAKKIIIDFFGVSVGTLLVALSLDLFLAPNKIAPGGVSGLAVVLQHLFGWPIGAVTLAINIPLFIISTKALGTGFGA KTLYSTILLGVSIDALAFLKPLTHDTILAAVYGGIIMGVGIGIVIKYGATTGGTDMAAMTLHKYIHFLSVGRILLIIDFV IITLAGIVFSPELALYALATEFISIKVIDLIQEGSGDERIAIIISDRYEEISKSILEEMERGVTELKGRGGYSKKDKNVL LCVVTRREVTTLRSLVKRIDPNAFMILSTAHEVLGEGFKNM
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0750 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 - InterPro: IPR019264 [H]
Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]
EC number: NA
Molecular weight: Translated: 30149; Mature: 30149
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITAKKIIIDFFGVSVGTLLVALSLDLFLAPNKIAPGGVSGLAVVLQHLFGWPIGAVTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCHHHEEE AINIPLFIISTKALGTGFGAKTLYSTILLGVSIDALAFLKPLTHDTILAAVYGGIIMGVG EEECEEEEEEEHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC IGIVIKYGATTGGTDMAAMTLHKYIHFLSVGRILLIIDFVIITLAGIVFSPELALYALAT CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EFISIKVIDLIQEGSGDERIAIIISDRYEEISKSILEEMERGVTELKGRGGYSKKDKNVL HHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE LCVVTRREVTTLRSLVKRIDPNAFMILSTAHEVLGEGFKNM EEEEECHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCC >Mature Secondary Structure MKITAKKIIIDFFGVSVGTLLVALSLDLFLAPNKIAPGGVSGLAVVLQHLFGWPIGAVTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCHHHEEE AINIPLFIISTKALGTGFGAKTLYSTILLGVSIDALAFLKPLTHDTILAAVYGGIIMGVG EEECEEEEEEEHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC IGIVIKYGATTGGTDMAAMTLHKYIHFLSVGRILLIIDFVIITLAGIVFSPELALYALAT CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EFISIKVIDLIQEGSGDERIAIIISDRYEEISKSILEEMERGVTELKGRGGYSKKDKNVL HHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE LCVVTRREVTTLRSLVKRIDPNAFMILSTAHEVLGEGFKNM EEEEECHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]