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The map label for this gene is ygeR [C]

Identifier: 167039577

GI number: 167039577

Start: 946809

End: 947792

Strand: Reverse

Name: ygeR [C]

Synonym: Teth514_0925

Alternate gene names: 167039577

Gene position: 947792-946809 (Counterclockwise)

Preceding gene: 167039584

Following gene: 167039557

Centisome position: 38.57

GC content: 36.28

Gene sequence:

>984_bases
ATGGTCACTTTAGAATTCACATACGTAGTACAACCAGGAGACACGATATTTTCAATTGCTAAAAAATTTAACACCTCAGT
TGACGCTATAATCACAAGAAACAACATTATAAATCCATCTTTAATATATCCTGGACAAAGGCTTGTCATTCCAGTACAAG
GAAGTTATTATACTGTCCAACCTGGAGATACTCTATATCTTATTGCTCAAAAATTTAATGTTCCTTACGAAGCTATCATT
TATACAAATAATCTCACATACCCTTATACAATATATCCGGGTCAAAAGCTATTCATCCCTGGAGCAAAAATAATCGCACC
ACAACCACCACTACCTTCACCACCTCCCGCACAAAAGCCTTGTCCAACTTATTACACAGTACAGCCAGGAGATACTTTAT
GGACTATAGCACAAAAATTTGGAGTATCATTGGAGGAGCTAATTAAAGCAAACTATTTAATAAATCCAAATATGATATAC
CCTGGGCAAACATTAATAATTCCTTGTCCCACATCGCCACCCATTGAATATCCCACACTAAAGATTGGAGATAAAGGACC
CTTTGTAGTAAATCTCCAAGCAAGACTAAAATCTTTGGGCTTTGACCCTGGTCCTATTGATGGTATCTTTGGAAGAAAAA
CAGAAGAAGCCGTAAAAGCGTATCAGCAAAGCAGAGGACTTCCAGTAACAGGAATTGTCGATAATGTGACATGGAATGCA
CTCTTGTTTGGAACTCCTCCTGTTACTACCCCTACACCACCAGGAAAAGTTTATATAGTAAAACCTGGTGACACTTTATG
GAATATAGCAAAAACTTTCAATACAACAGTAGACGTTATATTAAAGGCAAATCCAGATATTAAAGACCCTAATTTGATTT
ATCCCGGTCAGAGAATTATAATTCCTACATCTTCACAAGAAATAGTCTATAACCAAGAAGTACAAGAAATAAATGCAGAA
CAAGAACAAGAGCAAGAAGAATAA

Upstream 100 bases:

>100_bases
CATCCCCTTATCTTTTAGTAAAAATTATTCATCTAAAAAAGTTTATATGTCACTTAATAATAAAATCCACATATTATGAT
TAAAGGAAGGGGGTAAAAAT

Downstream 100 bases:

>100_bases
AGTGAAAAATAGTCAGGAAAAATCCTGACTATTTTTTTAGGCTGTCTATATATTTTTCTGCTACATAAGCCGCTATTGCG
CCATCTCCAGCAGCCGTTAT

Product: peptidoglycan binding domain-containing protein

Products: NA

Alternate protein names: 1,4-beta-N-acetylmuramoylhydrolase; Lysozyme; Peptidoglycan hydrolase; Pg-hydrolase 2 [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MVTLEFTYVVQPGDTIFSIAKKFNTSVDAIITRNNIINPSLIYPGQRLVIPVQGSYYTVQPGDTLYLIAQKFNVPYEAII
YTNNLTYPYTIYPGQKLFIPGAKIIAPQPPLPSPPPAQKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKANYLINPNMIY
PGQTLIIPCPTSPPIEYPTLKIGDKGPFVVNLQARLKSLGFDPGPIDGIFGRKTEEAVKAYQQSRGLPVTGIVDNVTWNA
LLFGTPPVTTPTPPGKVYIVKPGDTLWNIAKTFNTTVDVILKANPDIKDPNLIYPGQRIIIPTSSQEIVYNQEVQEINAE
QEQEQEE

Sequences:

>Translated_327_residues
MVTLEFTYVVQPGDTIFSIAKKFNTSVDAIITRNNIINPSLIYPGQRLVIPVQGSYYTVQPGDTLYLIAQKFNVPYEAII
YTNNLTYPYTIYPGQKLFIPGAKIIAPQPPLPSPPPAQKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKANYLINPNMIY
PGQTLIIPCPTSPPIEYPTLKIGDKGPFVVNLQARLKSLGFDPGPIDGIFGRKTEEAVKAYQQSRGLPVTGIVDNVTWNA
LLFGTPPVTTPTPPGKVYIVKPGDTLWNIAKTFNTTVDVILKANPDIKDPNLIYPGQRIIIPTSSQEIVYNQEVQEINAE
QEQEQEE
>Mature_327_residues
MVTLEFTYVVQPGDTIFSIAKKFNTSVDAIITRNNIINPSLIYPGQRLVIPVQGSYYTVQPGDTLYLIAQKFNVPYEAII
YTNNLTYPYTIYPGQKLFIPGAKIIAPQPPLPSPPPAQKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKANYLINPNMIY
PGQTLIIPCPTSPPIEYPTLKIGDKGPFVVNLQARLKSLGFDPGPIDGIFGRKTEEAVKAYQQSRGLPVTGIVDNVTWNA
LLFGTPPVTTPTPPGKVYIVKPGDTLWNIAKTFNTTVDVILKANPDIKDPNLIYPGQRIIIPTSSQEIVYNQEVQEINAE
QEQEQEE

Specific function: May work in concert with and potentiate the processive hydrolytic action of muramidase-1, which requires binding of the enzyme to non-reducing ends of glycan chains. Hydrolysis in the midst of glycan chains would increase the number of binding sites for m

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013338
- InterPro:   IPR002901
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01832 Glucosaminidase; PF01476 LysM [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 36252; Mature: 36252

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLEFTYVVQPGDTIFSIAKKFNTSVDAIITRNNIINPSLIYPGQRLVIPVQGSYYTVQ
CEEEEEEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCCEECCCCEEEEEECCCEEEEC
PGDTLYLIAQKFNVPYEAIIYTNNLTYPYTIYPGQKLFIPGAKIIAPQPPLPSPPPAQKP
CCCEEEEEEEECCCCEEEEEEECCCCEEEEECCCCEEEECCCEEECCCCCCCCCCCCCCC
CPTYYTVQPGDTLWTIAQKFGVSLEELIKANYLINPNMIYPGQTLIIPCPTSPPIEYPTL
CCCEEEECCCCHHHHHHHHHCCCHHHHHHCCEEECCCEECCCCEEEEECCCCCCCCCCEE
KIGDKGPFVVNLQARLKSLGFDPGPIDGIFGRKTEEAVKAYQQSRGLPVTGIVDNVTWNA
EECCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCEEEE
LLFGTPPVTTPTPPGKVYIVKPGDTLWNIAKTFNTTVDVILKANPDIKDPNLIYPGQRII
EEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEECCCCEEE
IPTSSQEIVYNQEVQEINAEQEQEQEE
EECCCCCEEECCHHHHCCCHHHHHHCC
>Mature Secondary Structure
MVTLEFTYVVQPGDTIFSIAKKFNTSVDAIITRNNIINPSLIYPGQRLVIPVQGSYYTVQ
CEEEEEEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCCEECCCCEEEEEECCCEEEEC
PGDTLYLIAQKFNVPYEAIIYTNNLTYPYTIYPGQKLFIPGAKIIAPQPPLPSPPPAQKP
CCCEEEEEEEECCCCEEEEEEECCCCEEEEECCCCEEEECCCEEECCCCCCCCCCCCCCC
CPTYYTVQPGDTLWTIAQKFGVSLEELIKANYLINPNMIYPGQTLIIPCPTSPPIEYPTL
CCCEEEECCCCHHHHHHHHHCCCHHHHHHCCEEECCCEECCCCEEEEECCCCCCCCCCEE
KIGDKGPFVVNLQARLKSLGFDPGPIDGIFGRKTEEAVKAYQQSRGLPVTGIVDNVTWNA
EECCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCEEEE
LLFGTPPVTTPTPPGKVYIVKPGDTLWNIAKTFNTTVDVILKANPDIKDPNLIYPGQRII
EEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEECCCCEEE
IPTSSQEIVYNQEVQEINAEQEQEQEE
EECCCCCEEECCHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1347040; 2753858 [H]