Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

Click here to switch to the map view.

The map label for this gene is 167039584

Identifier: 167039584

GI number: 167039584

Start: 954077

End: 954472

Strand: Reverse

Name: 167039584

Synonym: Teth514_0932

Alternate gene names: NA

Gene position: 954472-954077 (Counterclockwise)

Preceding gene: 167039604

Following gene: 167039577

Centisome position: 38.84

GC content: 29.8

Gene sequence:

>396_bases
ATGAATAAAGATAAAATTATAGAAAAAAATATAAGGGAAAAATTAGAAAAGGAAATGGTGTCTTACGGGGTAGATATAAA
TGTTCGGTGTATCAATGGACATGTAACTTTGTACGGAATAGTAGATAACTTATCCAAAAAAAATCACGCTCAAAAAATAG
CAGAAAGCGTGGAAGGTGTAGAAAAAGATGTGTCTCTTGTAAATTTAGTAGTACAAAAGCTGTCTCGTTATGATTTGAGT
TTACCTGATTTAGTTATTACAGCAAACAATGGGACAGTAACATTAAGTGGATATGTAAATAATTTAAAAGAAAAAGAATT
AGCCAATGAAGCAGCTCAAAGCGTAAATGGGGTAAAAAAAGTAATAAATCATATAAAAATTAGAGAGAAGTCATAG

Upstream 100 bases:

>100_bases
AGAATATTAAAGATTTCCAGTTATAAATGCGCTTTATTAAATTTTTAAGAAGTGAGACAAATTTATTGTCTTTAAAATTA
ATTATACGAGGAGGATGAAA

Downstream 100 bases:

>100_bases
AAGGATATGTTATTCTATGACTTCTACTCTTATATCATTCTTTTCTACTTCTTTTTTCAATGGATTTATCACATCTCCAT
GAAGTATAACATCCAGAGCA

Product: transport-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MNKDKIIEKNIREKLEKEMVSYGVDINVRCINGHVTLYGIVDNLSKKNHAQKIAESVEGVEKDVSLVNLVVQKLSRYDLS
LPDLVITANNGTVTLSGYVNNLKEKELANEAAQSVNGVKKVINHIKIREKS

Sequences:

>Translated_131_residues
MNKDKIIEKNIREKLEKEMVSYGVDINVRCINGHVTLYGIVDNLSKKNHAQKIAESVEGVEKDVSLVNLVVQKLSRYDLS
LPDLVITANNGTVTLSGYVNNLKEKELANEAAQSVNGVKKVINHIKIREKS
>Mature_131_residues
MNKDKIIEKNIREKLEKEMVSYGVDINVRCINGHVTLYGIVDNLSKKNHAQKIAESVEGVEKDVSLVNLVVQKLSRYDLS
LPDLVITANNGTVTLSGYVNNLKEKELANEAAQSVNGVKKVINHIKIREKS

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14615; Mature: 14615

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDKIIEKNIREKLEKEMVSYGVDINVRCINGHVTLYGIVDNLSKKNHAQKIAESVEGV
CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEHHHHCCHHHHHHHHHHHHHH
EKDVSLVNLVVQKLSRYDLSLPDLVITANNGTVTLSGYVNNLKEKELANEAAQSVNGVKK
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
VINHIKIREKS
HHHHHHCCCCC
>Mature Secondary Structure
MNKDKIIEKNIREKLEKEMVSYGVDINVRCINGHVTLYGIVDNLSKKNHAQKIAESVEGV
CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEHHHHCCHHHHHHHHHHHHHH
EKDVSLVNLVVQKLSRYDLSLPDLVITANNGTVTLSGYVNNLKEKELANEAAQSVNGVKK
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
VINHIKIREKS
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA