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The map label for this gene is mrnC [H]

Identifier: 167039501

GI number: 167039501

Start: 885191

End: 885523

Strand: Direct

Name: mrnC [H]

Synonym: Teth514_0847

Alternate gene names: 167039501

Gene position: 885191-885523 (Clockwise)

Preceding gene: 167039500

Following gene: 167039502

Centisome position: 36.02

GC content: 34.23

Gene sequence:

>333_bases
ATGCTGTGTATAGTTTATACATTCGCACCAAAATTGTGGCCCAAAAAAAATCAGCCTGTTAATTTTTTGCACAAAGAGAC
AGTTAAGTACGTAAAAGCCAAAGCTCAGGCAGAATCTGTAAAAAGAATTTATGATCTTCTCTCAGAAGAGGAAAAAGATA
TAGTTAGAAGAGGAAGGAATATGAAGTCTAATACTACACCTAAAGGAGTAGAAGTACAGGCCTATAGATATGCTACGGGA
TTTGAAGCTTTGCTAGGTTATCTATATCTTGCAGGAGAATTTGAAAGATTAAAAAACATTCTTGAGCTTTCTGTACAAGT
TATTGAAGAATAG

Upstream 100 bases:

>100_bases
AAGATGGAAAAGAGTATGATGGGGTTTTTGGAAAATACAGAGTTACTTACGAAGGAGGGGGTGTTAAGTTTATCCCCCCT
TGTTTTAGCTTTTATTGGAG

Downstream 100 bases:

>100_bases
GTGATGATTATGGAAGAGCAGAATGTAATTTTTGGTAGAAATCCAGTAATCGAAGCTATAAAAAGTGGGAAGGAAATTGA
AAAAATATATGTTTCTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLCIVYTFAPKLWPKKNQPVNFLHKETVKYVKAKAQAESVKRIYDLLSEEEKDIVRRGRNMKSNTTPKGVEVQAYRYATG
FEALLGYLYLAGEFERLKNILELSVQVIEE

Sequences:

>Translated_110_residues
MLCIVYTFAPKLWPKKNQPVNFLHKETVKYVKAKAQAESVKRIYDLLSEEEKDIVRRGRNMKSNTTPKGVEVQAYRYATG
FEALLGYLYLAGEFERLKNILELSVQVIEE
>Mature_110_residues
MLCIVYTFAPKLWPKKNQPVNFLHKETVKYVKAKAQAESVKRIYDLLSEEEKDIVRRGRNMKSNTTPKGVEVQAYRYATG
FEALLGYLYLAGEFERLKNILELSVQVIEE

Specific function: Might be an RNase involved in RNA processing [H]

COG id: COG1939

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RNase III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000999
- InterPro:   IPR008226 [H]

Pfam domain/function: PF00636 Ribonuclease_3 [H]

EC number: NA

Molecular weight: Translated: 12787; Mature: 12787

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCIVYTFAPKLWPKKNQPVNFLHKETVKYVKAKAQAESVKRIYDLLSEEEKDIVRRGRN
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
MKSNTTPKGVEVQAYRYATGFEALLGYLYLAGEFERLKNILELSVQVIEE
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLCIVYTFAPKLWPKKNQPVNFLHKETVKYVKAKAQAESVKRIYDLLSEEEKDIVRRGRN
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
MKSNTTPKGVEVQAYRYATGFEALLGYLYLAGEFERLKNILELSVQVIEE
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]