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The map label for this gene is yacO [H]

Identifier: 167039502

GI number: 167039502

Start: 885533

End: 886276

Strand: Direct

Name: yacO [H]

Synonym: Teth514_0848

Alternate gene names: 167039502

Gene position: 885533-886276 (Clockwise)

Preceding gene: 167039501

Following gene: 167039503

Centisome position: 36.04

GC content: 34.41

Gene sequence:

>744_bases
ATGGAAGAGCAGAATGTAATTTTTGGTAGAAATCCAGTAATCGAAGCTATAAAAAGTGGGAAGGAAATTGAAAAAATATA
TGTTTCTAAAACAGCAGGAGGAAATATTTCAAAGATAATAAATTTTGCCAAAGAAGCAGGTATTGTAGTTTCTACTACTG
ATAATGATACTTTAAGTGAACTTGCCGGTAGTCGAAATCACCAAGGGGTCGTAGCTTTATCTGCTGTCTATAAATACTTT
GAAGTAGATGACCTTTTGGAATATGCTGAACAAAAGAAAGAAAAGCCTTTTTTGTTGATATTAGATGAGATAACTGACCC
TCACAATTTAGGTGCGATTATAAGAAGCGCAGAGGCTTTTGGGGTCCATGGGATAATAATTCCAAAAAGGCGGGCAGTAG
GAGTTAATGCTACTGTTGTAAAAACTTCTGCTGGAGCAGTAGAACATATGAGAATAGCAAAAGTATCAAATATTAACAAT
ACAATACGAGATTTAAAAGAAAGAGGCTTGTGGATTGTTGGAACGGATGTAAATGCGGAAAAAAGTTTTGAAGAGCTGAA
TTATGATTTTCCTGTTGCTTTTGTCATTGGGAATGAAGGAAAAGGGGTTTCGAAATTAGTTTTACAAAATTGTGATTTTG
TAGTCAAAATCCCCATGAAGGGTAAGATAAACTCTTTAAATGCTTCTGTAGCAGCCTCCATTTTAATTTATCAAGTAGTT
TCAAAAAGAAAAGATAAGGCGTGA

Upstream 100 bases:

>100_bases
TGAAGCTTTGCTAGGTTATCTATATCTTGCAGGAGAATTTGAAAGATTAAAAAACATTCTTGAGCTTTCTGTACAAGTTA
TTGAAGAATAGGTGATGATT

Downstream 100 bases:

>100_bases
TGTCCTTGTACATGTTGGTGGATGGTTATAATGTAATAAATAATTGGCAGATACTAAAAGAAGAAGCGCAAAAAAACTTG
GAAGATGCGCGGGACAAGTT

Product: RNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MEEQNVIFGRNPVIEAIKSGKEIEKIYVSKTAGGNISKIINFAKEAGIVVSTTDNDTLSELAGSRNHQGVVALSAVYKYF
EVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNINN
TIRDLKERGLWIVGTDVNAEKSFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVV
SKRKDKA

Sequences:

>Translated_247_residues
MEEQNVIFGRNPVIEAIKSGKEIEKIYVSKTAGGNISKIINFAKEAGIVVSTTDNDTLSELAGSRNHQGVVALSAVYKYF
EVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNINN
TIRDLKERGLWIVGTDVNAEKSFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVV
SKRKDKA
>Mature_247_residues
MEEQNVIFGRNPVIEAIKSGKEIEKIYVSKTAGGNISKIINFAKEAGIVVSTTDNDTLSELAGSRNHQGVVALSAVYKYF
EVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNINN
TIRDLKERGLWIVGTDVNAEKSFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVV
SKRKDKA

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Homo sapiens, GI40068479, Length=259, Percent_Identity=26.6409266409266, Blast_Score=102, Evalue=3e-22,
Organism=Escherichia coli, GI1790623, Length=205, Percent_Identity=38.0487804878049, Blast_Score=161, Evalue=3e-41,
Organism=Escherichia coli, GI1790083, Length=171, Percent_Identity=26.9005847953216, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1788935, Length=191, Percent_Identity=26.7015706806283, Blast_Score=76, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17555908, Length=253, Percent_Identity=29.2490118577075, Blast_Score=100, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6324775, Length=173, Percent_Identity=36.4161849710983, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004441
- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 26999; Mature: 26999

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEQNVIFGRNPVIEAIKSGKEIEKIYVSKTAGGNISKIINFAKEAGIVVSTTDNDTLSE
CCCCCEEECCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCHHHHH
LAGSRNHQGVVALSAVYKYFEVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAEAF
HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHC
GVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNINNTIRDLKERGLWIVGTDVNAE
CEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCH
KSFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVV
HHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
SKRKDKA
HHHCCCC
>Mature Secondary Structure
MEEQNVIFGRNPVIEAIKSGKEIEKIYVSKTAGGNISKIINFAKEAGIVVSTTDNDTLSE
CCCCCEEECCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCHHHHH
LAGSRNHQGVVALSAVYKYFEVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAEAF
HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHC
GVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNINNTIRDLKERGLWIVGTDVNAE
CEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCH
KSFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVV
HHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
SKRKDKA
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 7510287; 3145906 [H]