| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is hepT [H]
Identifier: 167039330
GI number: 167039330
Start: 705553
End: 706521
Strand: Direct
Name: hepT [H]
Synonym: Teth514_0672
Alternate gene names: 167039330
Gene position: 705553-706521 (Clockwise)
Preceding gene: 167039329
Following gene: 167039331
Centisome position: 28.71
GC content: 31.68
Gene sequence:
>969_bases ATGGATAAGTTTTGGAATAATAATTTAGAGATAAAAAATGAGCTTACTGAAGTTATAAAAATAATGGAAAAGCGTATTAA AAACTCTAACAAATCAATCAGGAATATATTGTTAGATATGATCTATAATAGTGGTAAAATGCTCAGACCTGCTTTTGTAA TCTTAGCCGGGAAATTTGGAGAATACGATAGAAAGAAAATATTGCCTTTAGCTGCTGCTATAGAAATGCTCCACATGGCA ACTTTGGTACATGATGATATAATTGATAATGCTTTGATAAGGCGGAGCAAGCCCACTATCCAAGCAGAATATGGAAAAGA TTATGCTGTATTTATAGGAGATTTCCTTTTTTCTGAGAGTTTTTTGTTGTTATCAGATAATATCGCTATTAGTAATCTAA AAAAAGTGTCAAAAGTAGTCTCAAAGATATGCAAAGGTGAAATTGGACAATTTGAGAGTCGTCGCAATATCGACATTACA ATAAATGATTATTTGAGGCGAATAGCTGCGAAAACTGCTGCTCTTTTTGCTCTAAGCTTTTATGTTGGAGCCTATGAAAG CAAGTGTGACGAAAACTTAGCTAAAGCATTGGGAAGTATAGGCTACAATATTGGCATGGCTTTTCAAATTATAGACGATA TTTTAGATTATACTGGTCAAGAGGCTGTAGTTGGGAAACCTCTGGGCAATGATATAAGAGAAGGGGTTTTTACTCTGCCT TTAATCTATTCGCTGGATAAGAATAAAGATAAAATAATGTTAGAATTACTTAAAAAAGAGAGTTATTCTGAGGAAGACAT AAAACAAATAATTGAATTTGTTCAGCAAAATGGTGGAATAGATCGGTCAAAAATGTTGGCACAAAAATATACTAAAAAGG CTTTTGATAAAATATCTATGTTGAAAGACTCTCCATCTAAACAAGTTTTAATTGAAGTTACTGGTAAACTTTTATATAGA AATTATTAA
Upstream 100 bases:
>100_bases GGAATAGGGACTGGTGTTTTTGTGGGACTGACTGCGAAATTTGTTTTAAAACATTGGGGAAAATTAAAAAATTTAAATTT ACATTGATTAAGGTGGTTAG
Downstream 100 bases:
>100_bases TTAAAATAATTAAAAAGAGATGTAAAGTCTTTTTTGGAGGAGATCATTATATGAAAAAATCTATGACTTTTTTTGCAGCT TTTTTTCTAATATTCACTGT
Product: polyprenyl synthetase
Products: NA
Alternate protein names: HEPPP synthase subunit 2; Spore germination protein C3 [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MDKFWNNNLEIKNELTEVIKIMEKRIKNSNKSIRNILLDMIYNSGKMLRPAFVILAGKFGEYDRKKILPLAAAIEMLHMA TLVHDDIIDNALIRRSKPTIQAEYGKDYAVFIGDFLFSESFLLLSDNIAISNLKKVSKVVSKICKGEIGQFESRRNIDIT INDYLRRIAAKTAALFALSFYVGAYESKCDENLAKALGSIGYNIGMAFQIIDDILDYTGQEAVVGKPLGNDIREGVFTLP LIYSLDKNKDKIMLELLKKESYSEEDIKQIIEFVQQNGGIDRSKMLAQKYTKKAFDKISMLKDSPSKQVLIEVTGKLLYR NY
Sequences:
>Translated_322_residues MDKFWNNNLEIKNELTEVIKIMEKRIKNSNKSIRNILLDMIYNSGKMLRPAFVILAGKFGEYDRKKILPLAAAIEMLHMA TLVHDDIIDNALIRRSKPTIQAEYGKDYAVFIGDFLFSESFLLLSDNIAISNLKKVSKVVSKICKGEIGQFESRRNIDIT INDYLRRIAAKTAALFALSFYVGAYESKCDENLAKALGSIGYNIGMAFQIIDDILDYTGQEAVVGKPLGNDIREGVFTLP LIYSLDKNKDKIMLELLKKESYSEEDIKQIIEFVQQNGGIDRSKMLAQKYTKKAFDKISMLKDSPSKQVLIEVTGKLLYR NY >Mature_322_residues MDKFWNNNLEIKNELTEVIKIMEKRIKNSNKSIRNILLDMIYNSGKMLRPAFVILAGKFGEYDRKKILPLAAAIEMLHMA TLVHDDIIDNALIRRSKPTIQAEYGKDYAVFIGDFLFSESFLLLSDNIAISNLKKVSKVVSKICKGEIGQFESRRNIDIT INDYLRRIAAKTAALFALSFYVGAYESKCDENLAKALGSIGYNIGMAFQIIDDILDYTGQEAVVGKPLGNDIREGVFTLP LIYSLDKNKDKIMLELLKKESYSEEDIKQIIEFVQQNGGIDRSKMLAQKYTKKAFDKISMLKDSPSKQVLIEVTGKLLYR NY
Specific function: Supplies heptaprenyl diphosphate, the precursor for the side chain of the isoprenoid quinone menaquinone-7 (MQ-7) [H]
COG id: COG0142
COG function: function code H; Geranylgeranyl pyrophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FPP/GGPP synthase family [H]
Homologues:
Organism=Homo sapiens, GI50659086, Length=284, Percent_Identity=29.9295774647887, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI4758430, Length=302, Percent_Identity=21.8543046357616, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI83700220, Length=302, Percent_Identity=21.8543046357616, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1789578, Length=311, Percent_Identity=29.5819935691318, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1786623, Length=259, Percent_Identity=26.6409266409266, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17505681, Length=235, Percent_Identity=31.4893617021277, Blast_Score=110, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6319475, Length=312, Percent_Identity=28.8461538461538, Blast_Score=110, Evalue=3e-25, Organism=Drosophila melanogaster, GI24651612, Length=279, Percent_Identity=29.7491039426523, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI281365769, Length=267, Percent_Identity=23.5955056179775, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24660002, Length=267, Percent_Identity=23.5955056179775, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014119 - InterPro: IPR000092 - InterPro: IPR017446 - InterPro: IPR008949 [H]
Pfam domain/function: PF00348 polyprenyl_synt [H]
EC number: =2.5.1.30 [H]
Molecular weight: Translated: 36628; Mature: 36628
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS00444 POLYPRENYL_SYNTHET_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKFWNNNLEIKNELTEVIKIMEKRIKNSNKSIRNILLDMIYNSGKMLRPAFVILAGKFG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHEEEECCCC EYDRKKILPLAAAIEMLHMATLVHDDIIDNALIRRSKPTIQAEYGKDYAVFIGDFLFSES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCC FLLLSDNIAISNLKKVSKVVSKICKGEIGQFESRRNIDITINDYLRRIAAKTAALFALSF EEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH YVGAYESKCDENLAKALGSIGYNIGMAFQIIDDILDYTGQEAVVGKPLGNDIREGVFTLP HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHH LIYSLDKNKDKIMLELLKKESYSEEDIKQIIEFVQQNGGIDRSKMLAQKYTKKAFDKISM HHEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LKDSPSKQVLIEVTGKLLYRNY HHCCCCCEEHHHHHHHHHHCCC >Mature Secondary Structure MDKFWNNNLEIKNELTEVIKIMEKRIKNSNKSIRNILLDMIYNSGKMLRPAFVILAGKFG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHEEEECCCC EYDRKKILPLAAAIEMLHMATLVHDDIIDNALIRRSKPTIQAEYGKDYAVFIGDFLFSES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCC FLLLSDNIAISNLKKVSKVVSKICKGEIGQFESRRNIDITINDYLRRIAAKTAALFALSF EEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH YVGAYESKCDENLAKALGSIGYNIGMAFQIIDDILDYTGQEAVVGKPLGNDIREGVFTLP HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHH LIYSLDKNKDKIMLELLKKESYSEEDIKQIIEFVQQNGGIDRSKMLAQKYTKKAFDKISM HHEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LKDSPSKQVLIEVTGKLLYRNY HHCCCCCEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 2121900; 9720033 [H]