| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is gltB [C]
Identifier: 167039218
GI number: 167039218
Start: 582190
End: 583695
Strand: Direct
Name: gltB [C]
Synonym: Teth514_0559
Alternate gene names: 167039218
Gene position: 582190-583695 (Clockwise)
Preceding gene: 167039217
Following gene: 167039219
Centisome position: 23.69
GC content: 39.44
Gene sequence:
>1506_bases ATGAGTTTAAGCTACCTTACTCCAGAATTTAAAGTACTCAGAGATTACGATAAATGCATTAACTGTAAGGTTTGTATGAG ACAGTGTTCGTTTGAAGTTCACAGTTATGATGAACATTTAGATAAGATGGTTTCGAATGATATGAATTGTGTAAATTGTC AAAGATGTGTCGTGTTGTGTCCAACACAAGCTCTTACAATTATTAAACATCCTCAAACATTTAAAGAACATGCCAATTGG ACTTACGATGCTATAAGAGATATATACAGACAGGCAGAAACAGGTGGAGTTCTTCTGTCATCCATGGGAAATGATAGGCC TTATCCTGTATATTGGGATAAAATGGTTATAAATGCAAGCCAAGTTACAAACCCCTCTATAGACCCGCTAAGAGAACCTA TGGAATTAAGGGTATATATAGGTAGGAAGCCTGACAAGATAGAAATAGACGAAAACCTTAATGTTAAAACAAAAATGCCT CCACAACTCAAACTTGAGACACCAATAATGTTTTCAGCAATGTCTTATGGTTCAATAAGTTACAATGCTCACGCAGCTTT GGCAAGAGCTGCTGAAGAGCTTGGGATACTTTATAATACTGGTGAAGGGGGGCTTCATAAGGACTTCCGGAAATATGGCA AAAACACAATTGTACAGGTAGCATCAGGACGTTTTGGTGTTGATAGAGAATACCTTAATACTGCGGCGGCTATTGAAATA AAAATTGGTCAGGGTGCAAAGCCTGGGATAGGTGGTCATCTACCCGGTGAAAAGGTGAGTGAGGACATCTCGGCAACAAG GATGATACCACCTGGAAGTGATGCTATATCTCCTGCACCGCATCACGATATCTATTCAATTGAAGACCTTGCGCAATTAA TATATTCATTGAAGGAAGCTACCGATTATCAAAAACCTGTTGGTGTTAAAATTGCAGCAGTCAATAATGTGGCGGCAATA GCTTCGGGAATAGCAAGAGCTGGAGCAGATTATATAGCAATAGACGGATTTAGAGGCGGTACAGGGGCTGCTCCAAAGAG AATAAGGGATAACGTAGGAATTCCAATTGAATTTGCAATAGCTGCTGTAGATGCAAGACTCCGTTCTGAAGGTATAAGAC ATACAATATCTTTAGTTGCAGCTGGTAGTATTAGAAACAGTGCAGACATAGTCAAAGCAATAGCTCTTGGCGCAGATGCC GTTTACATTGCAACAGCTGCTTTGATTGCTTTGGGATGTCATATGTGCCAAAAATGCCATACTGGAAAGTGCAATTGGGG AATTGCTACACAAGATCCTAACCTTGTTAAAAGATTAAACCCAGAAATCGGATATAAACGTCTTGTTAACCTTGTTCAAG CATGGAGTCATGAAATAAAAGAAATGCTTGGTGGAATGGGTATAAATGATATTGAAAGTCTTAAAGGCAATAGGTTAATG CTTCGTGGCATAGGAATGACGCAAAAGGAACTTGATATACTTGGCATTCTTGCTGCCGGCGAATAG
Upstream 100 bases:
>100_bases ATCCTGAAAGCGTATGGATTCCTAGAGGTGGAGAACCTGTTATAGCTGAGCTCATACGTGACAACGAAAAAGAAATGTAT TCTACAAAGGAGGTTACTGC
Downstream 100 bases:
>100_bases GAGGTATTTTTGTGAAAAAGGTTTATGTAAAAGAAGAAGTGTGCGTGGGATGTAGATTATGTGAAGTATACTGTATTACA TCTCATTCAAAGTATAAAGA
Product: glutamate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MSLSYLTPEFKVLRDYDKCINCKVCMRQCSFEVHSYDEHLDKMVSNDMNCVNCQRCVVLCPTQALTIIKHPQTFKEHANW TYDAIRDIYRQAETGGVLLSSMGNDRPYPVYWDKMVINASQVTNPSIDPLREPMELRVYIGRKPDKIEIDENLNVKTKMP PQLKLETPIMFSAMSYGSISYNAHAALARAAEELGILYNTGEGGLHKDFRKYGKNTIVQVASGRFGVDREYLNTAAAIEI KIGQGAKPGIGGHLPGEKVSEDISATRMIPPGSDAISPAPHHDIYSIEDLAQLIYSLKEATDYQKPVGVKIAAVNNVAAI ASGIARAGADYIAIDGFRGGTGAAPKRIRDNVGIPIEFAIAAVDARLRSEGIRHTISLVAAGSIRNSADIVKAIALGADA VYIATAALIALGCHMCQKCHTGKCNWGIATQDPNLVKRLNPEIGYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLM LRGIGMTQKELDILGILAAGE
Sequences:
>Translated_501_residues MSLSYLTPEFKVLRDYDKCINCKVCMRQCSFEVHSYDEHLDKMVSNDMNCVNCQRCVVLCPTQALTIIKHPQTFKEHANW TYDAIRDIYRQAETGGVLLSSMGNDRPYPVYWDKMVINASQVTNPSIDPLREPMELRVYIGRKPDKIEIDENLNVKTKMP PQLKLETPIMFSAMSYGSISYNAHAALARAAEELGILYNTGEGGLHKDFRKYGKNTIVQVASGRFGVDREYLNTAAAIEI KIGQGAKPGIGGHLPGEKVSEDISATRMIPPGSDAISPAPHHDIYSIEDLAQLIYSLKEATDYQKPVGVKIAAVNNVAAI ASGIARAGADYIAIDGFRGGTGAAPKRIRDNVGIPIEFAIAAVDARLRSEGIRHTISLVAAGSIRNSADIVKAIALGADA VYIATAALIALGCHMCQKCHTGKCNWGIATQDPNLVKRLNPEIGYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLM LRGIGMTQKELDILGILAAGE >Mature_500_residues SLSYLTPEFKVLRDYDKCINCKVCMRQCSFEVHSYDEHLDKMVSNDMNCVNCQRCVVLCPTQALTIIKHPQTFKEHANWT YDAIRDIYRQAETGGVLLSSMGNDRPYPVYWDKMVINASQVTNPSIDPLREPMELRVYIGRKPDKIEIDENLNVKTKMPP QLKLETPIMFSAMSYGSISYNAHAALARAAEELGILYNTGEGGLHKDFRKYGKNTIVQVASGRFGVDREYLNTAAAIEIK IGQGAKPGIGGHLPGEKVSEDISATRMIPPGSDAISPAPHHDIYSIEDLAQLIYSLKEATDYQKPVGVKIAAVNNVAAIA SGIARAGADYIAIDGFRGGTGAAPKRIRDNVGIPIEFAIAAVDARLRSEGIRHTISLVAAGSIRNSADIVKAIALGADAV YIATAALIALGCHMCQKCHTGKCNWGIATQDPNLVKRLNPEIGYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLML RGIGMTQKELDILGILAAGE
Specific function: NITROGEN METABOLISM, GLUTAMATE BIOSYNTHESIS. THE CATALYZED REACTION BRINGS TOGETHER THE NITROGEN AND CARBON METABOLISM. [C]
COG id: COG0069
COG function: function code E; Glutamate synthase domain 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI308199519, Length=336, Percent_Identity=40.1785714285714, Blast_Score=218, Evalue=8e-58, Organism=Caenorhabditis elegans, GI17570289, Length=334, Percent_Identity=41.0179640718563, Blast_Score=231, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6320030, Length=333, Percent_Identity=40.5405405405405, Blast_Score=226, Evalue=5e-60, Organism=Drosophila melanogaster, GI28574881, Length=318, Percent_Identity=43.0817610062893, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24665539, Length=318, Percent_Identity=43.0817610062893, Blast_Score=225, Evalue=6e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013785 - InterPro: IPR002932 [H]
Pfam domain/function: PF01645 Glu_synthase [H]
EC number: =1.4.1.13 [H]
Molecular weight: Translated: 54742; Mature: 54611
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSYLTPEFKVLRDYDKCINCKVCMRQCSFEVHSYDEHLDKMVSNDMNCVNCQRCVVLC CCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEECCCEEEEEC PTQALTIIKHPQTFKEHANWTYDAIRDIYRQAETGGVLLSSMGNDRPYPVYWDKMVINAS CCHHEEEEECCHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCEEEEHH QVTNPSIDPLREPMELRVYIGRKPDKIEIDENLNVKTKMPPQLKLETPIMFSAMSYGSIS HCCCCCHHHHCCCCEEEEEECCCCCEEEECCCCCEEECCCCCEEECCCEEEEEECCCCCC YNAHAALARAAEELGILYNTGEGGLHKDFRKYGKNTIVQVASGRFGVDREYLNTAAAIEI CCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHCCEEEEEE KIGQGAKPGIGGHLPGEKVSEDISATRMIPPGSDAISPAPHHDIYSIEDLAQLIYSLKEA EECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TDYQKPVGVKIAAVNNVAAIASGIARAGADYIAIDGFRGGTGAAPKRIRDNVGIPIEFAI HCCCCCCCEEEEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCHHHHH AAVDARLRSEGIRHTISLVAAGSIRNSADIVKAIALGADAVYIATAALIALGCHMCQKCH HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC TGKCNWGIATQDPNLVKRLNPEIGYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLM CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEE LRGIGMTQKELDILGILAAGE EEECCCCHHHCCEEEEEECCC >Mature Secondary Structure SLSYLTPEFKVLRDYDKCINCKVCMRQCSFEVHSYDEHLDKMVSNDMNCVNCQRCVVLC CCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEECCCEEEEEC PTQALTIIKHPQTFKEHANWTYDAIRDIYRQAETGGVLLSSMGNDRPYPVYWDKMVINAS CCHHEEEEECCHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCEEEEHH QVTNPSIDPLREPMELRVYIGRKPDKIEIDENLNVKTKMPPQLKLETPIMFSAMSYGSIS HCCCCCHHHHCCCCEEEEEECCCCCEEEECCCCCEEECCCCCEEECCCEEEEEECCCCCC YNAHAALARAAEELGILYNTGEGGLHKDFRKYGKNTIVQVASGRFGVDREYLNTAAAIEI CCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHCCEEEEEE KIGQGAKPGIGGHLPGEKVSEDISATRMIPPGSDAISPAPHHDIYSIEDLAQLIYSLKEA EECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TDYQKPVGVKIAAVNNVAAIASGIARAGADYIAIDGFRGGTGAAPKRIRDNVGIPIEFAI HCCCCCCCEEEEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCHHHHH AAVDARLRSEGIRHTISLVAAGSIRNSADIVKAIALGADAVYIATAALIALGCHMCQKCH HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC TGKCNWGIATQDPNLVKRLNPEIGYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLM CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEE LRGIGMTQKELDILGILAAGE EEECCCCHHHCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]