| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is aegA [H]
Identifier: 167039219
GI number: 167039219
Start: 583707
End: 584156
Strand: Direct
Name: aegA [H]
Synonym: Teth514_0560
Alternate gene names: 167039219
Gene position: 583707-584156 (Clockwise)
Preceding gene: 167039218
Following gene: 167039220
Centisome position: 23.75
GC content: 38.89
Gene sequence:
>450_bases GTGAAAAAGGTTTATGTAAAAGAAGAAGTGTGCGTGGGATGTAGATTATGTGAAGTATACTGTATTACATCTCATTCAAA GTATAAAGATGTTTTAAAAGCATATAAGTTGGAACCCCAAAGGCCGACACCACGAATTGTTATAGAGGAAAATAAACCTG TATCTTTTTCGCTTCAGTGTAGACATTGCGATGATGCGCCATGCGTTAAATCATGCATAACAGGAGCGATGCGAAAAGAT CCATTAACAGGTGTTGTAACTTGTGACACAGATAAATGTGTTGGATGCTGGACTTGCGTGCTTGTGTGTGAGTTTGGTGC AATCATAAGAGATGTAAATAATAAGGTTGCATCAAAATGTGACTTATGTGCTGAAGCAGGAGAACCGGCTTGTGTCAAGA ATTGTCCTAATGAGGCACTTGTCTATAGTGAAGGAGGCATTTCTGTATGA
Upstream 100 bases:
>100_bases GTCTTAAAGGCAATAGGTTAATGCTTCGTGGCATAGGAATGACGCAAAAGGAACTTGATATACTTGGCATTCTTGCTGCC GGCGAATAGGAGGTATTTTT
Downstream 100 bases:
>100_bases GGATAGTAATAATTGGTAATTCTGTTGCGATGGTAGGTGCAGTAGAGGCAATAAGAAAATATGATACAAGTTCTGAAATA GTTGTTATTTCAGATGAAAC
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKKVYVKEEVCVGCRLCEVYCITSHSKYKDVLKAYKLEPQRPTPRIVIEENKPVSFSLQCRHCDDAPCVKSCITGAMRKD PLTGVVTCDTDKCVGCWTCVLVCEFGAIIRDVNNKVASKCDLCAEAGEPACVKNCPNEALVYSEGGISV
Sequences:
>Translated_149_residues MKKVYVKEEVCVGCRLCEVYCITSHSKYKDVLKAYKLEPQRPTPRIVIEENKPVSFSLQCRHCDDAPCVKSCITGAMRKD PLTGVVTCDTDKCVGCWTCVLVCEFGAIIRDVNNKVASKCDLCAEAGEPACVKNCPNEALVYSEGGISV >Mature_149_residues MKKVYVKEEVCVGCRLCEVYCITSHSKYKDVLKAYKLEPQRPTPRIVIEENKPVSFSLQCRHCDDAPCVKSCITGAMRKD PLTGVVTCDTDKCVGCWTCVLVCEFGAIIRDVNNKVASKCDLCAEAGEPACVKNCPNEALVYSEGGISV
Specific function: Unknown
COG id: COG1142
COG function: function code C; Fe-S-cluster-containing hydrogenase components 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788811, Length=148, Percent_Identity=33.7837837837838, Blast_Score=89, Evalue=1e-19, Organism=Escherichia coli, GI1789067, Length=147, Percent_Identity=36.734693877551, Blast_Score=88, Evalue=2e-19, Organism=Escherichia coli, GI87082179, Length=143, Percent_Identity=34.2657342657343, Blast_Score=83, Evalue=9e-18, Organism=Escherichia coli, GI2367345, Length=144, Percent_Identity=36.1111111111111, Blast_Score=78, Evalue=2e-16, Organism=Escherichia coli, GI2367245, Length=134, Percent_Identity=36.5671641791045, Blast_Score=78, Evalue=3e-16, Organism=Escherichia coli, GI87082180, Length=143, Percent_Identity=32.1678321678322, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1787872, Length=152, Percent_Identity=30.2631578947368, Blast_Score=70, Evalue=6e-14, Organism=Escherichia coli, GI226510944, Length=94, Percent_Identity=38.2978723404255, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI1789370, Length=105, Percent_Identity=37.1428571428571, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI1787122, Length=152, Percent_Identity=30.9210526315789, Blast_Score=68, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 16362; Mature: 16362
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 12.8 %Cys+Met (Translated Protein) 11.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 12.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVYVKEEVCVGCRLCEVYCITSHSKYKDVLKAYKLEPQRPTPRIVIEENKPVSFSLQC CCCEECCHHHHHHCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEE RHCDDAPCVKSCITGAMRKDPLTGVVTCDTDKCVGCWTCVLVCEFGAIIRDVNNKVASKC CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLCAEAGEPACVKNCPNEALVYSEGGISV HHHHHCCCCHHHHCCCCCEEEECCCCCCC >Mature Secondary Structure MKKVYVKEEVCVGCRLCEVYCITSHSKYKDVLKAYKLEPQRPTPRIVIEENKPVSFSLQC CCCEECCHHHHHHCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEE RHCDDAPCVKSCITGAMRKDPLTGVVTCDTDKCVGCWTCVLVCEFGAIIRDVNNKVASKC CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLCAEAGEPACVKNCPNEALVYSEGGISV HHHHHCCCCHHHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]