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The map label for this gene is ydiF [H]

Identifier: 167039154

GI number: 167039154

Start: 507134

End: 509026

Strand: Reverse

Name: ydiF [H]

Synonym: Teth514_0493

Alternate gene names: 167039154

Gene position: 509026-507134 (Counterclockwise)

Preceding gene: 167039168

Following gene: 167039122

Centisome position: 20.72

GC content: 29.27

Gene sequence:

>1893_bases
ATGGCAATCATAACAGTAAGCAATGTGACAAAAAGTTACGGTATCGATATAATTCTACAAAATATTTCTTTTATAGTCAA
TGAAGGAGACAAAATAGGAGTAATTGGCGAAAATGGTGCTGGAAAATCCACTCTTTTTAACCTTTTAGCCGGTTTTACTG
AAGCTGACAGTGGAACAATTTCAATTTCTACAAATAAAATTGGATATCTACAACAAAACACTGTAATTGATTCTGAAAAA
AGTATATATGAGGAAGTAAAAACAGTTTTTGATGAAATATTCCAATTAGAAAAACAAATTAAATCTCTAGAGGAAAAAAT
CTCACAAACAAAAGATTCACATCTACTTGATAAACTTTTTTTAGAATATTCCTTTTTAACAGATAAGTATAAGGAATTAG
ATGGTTATTCTGTAGAAAGTAAAATAAGAGGTGTACTAAATGGATTAGGGTTTGATGTGTCGCAATTTGCTACAACTGTA
TCAACTTTAAGCGGCGGTCAAAAAACCCGTCTTATGCTGGCAAAAACTTTACTTTTAAGTCCAGATGTCCTATTATTAGA
CGAACCTACCAATCACTTAGACATAAACTCAATAGAATGGCTAGAGCAATATTTAAAATTTTATAATGGTACAATTTTAA
TTATATCCCATGATAGGTATTTCTTGGATAAAATTGTCACTCGAATATTTGAAATTGAAAATACTCATTTAAGTGTTTAC
GAAGGCAATTACACAGAATATTTAAAAAGAAAAAAATTGGAAATGGAAGCAAAGTTAAAAGCTTATGAAGAACAGCAAAA
AGAAATAAAAAGAATTAAATCAATTATACAGATTCAAAAAAACCGTAGAACAGAAAAGTCAGTAAAAATGGCAGAAAGCA
AGCAAAAACTATTAGAAAAAATGGAAATAATAGAAAAGCCAGTGATAAATAATAAATCTATCAACTTGCGTTTTGATTTC
GATTTAGAAAGCGGAAATGATGTATTGACAGTCAAAAATTTGTCTTTACGCTTTGACAGACAAATTTTCTCCAATGTATC
TTTTGAAATAAAAAAAGGGGAAAAAATTGCCCTTTTAGGGCCAAACGGAATAGGAAAAAGCTCTCTTTTAAAAATATTAG
TGGGGGAAATTGACAATTTTGAAGGGGAAATTAAATTTGGCACAAACGTAATAACAGGTTATTACGAACAAGAATTTAAA
AGTTTAAATGCTGAAAAAACAGCCATTGATGAAATATGGGATGAAAATCCATATCTTACTCAAACAGAAGTGAGGACATT
ATTAGCTTCTTTTCTTTTTAGAGAAGAAGATGTCTTTAAAACTATCTCTACACTAAGTGGTGGTGAAAAGGCAAGGCTTT
CATTGCTAAAGCTCATCCTTTCAAAAGCGAATTTTCTACTTATGGATGAACCAACTAACCATTTAGATTTAAAAGCAAAA
GAAGTATTAGAAGAAGCTTTGTTAGATTATACTGGAACTTTATTATTTGTCTCCCATGACAGATATTTTATAGACAAAAT
TGCTACAAAAGTGATGATTTTGACACCTCAAGGTGTAGAAGTATACTTAGGTAATTACAGCTATTATATAGAAAAGAAAA
ACCAGCTTAACGAAAAAAAAGAAGAAACAATCAAAAAAACAAAAACACAGATAAAAAACGAAAGGTATAAAGAAAGATTA
GCTAAACTTAAGTTAAAGCAGCAAAAAGAGTATCTGAAAAACCTTGAAAATTCAATTTATCAAGCTGAAGAAAGAATAAA
ATATTTGGAAGAAAAAATGTGTGATGCTAAAATTTATAAAACAGGAGAAATTGTAGAAATACAAAAAGAATACAACGCCC
TTAAAAGCAAATTAGAACAAATGTATGAAGAATGGGAAAATTTAAGCGGGTAA

Upstream 100 bases:

>100_bases
TTAATTTTTATCGACACATATTTAAAAAAAGTTATAGTTTACTACACTTTTACAAAATAAATTTTTTTGATATATTTAAT
ATGAACAGGAGGTTATATTT

Downstream 100 bases:

>100_bases
AAACCCGCTTTAGTATCCTTTATCTAAATTTACAATATTTCTCAAAGGTCTTCCTTCTTTATAAGCTATCAAATTTTCTC
TTAAAATTTCCATCGCTCTT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 630; Mature: 629

Protein sequence:

>630_residues
MAIITVSNVTKSYGIDIILQNISFIVNEGDKIGVIGENGAGKSTLFNLLAGFTEADSGTISISTNKIGYLQQNTVIDSEK
SIYEEVKTVFDEIFQLEKQIKSLEEKISQTKDSHLLDKLFLEYSFLTDKYKELDGYSVESKIRGVLNGLGFDVSQFATTV
STLSGGQKTRLMLAKTLLLSPDVLLLDEPTNHLDINSIEWLEQYLKFYNGTILIISHDRYFLDKIVTRIFEIENTHLSVY
EGNYTEYLKRKKLEMEAKLKAYEEQQKEIKRIKSIIQIQKNRRTEKSVKMAESKQKLLEKMEIIEKPVINNKSINLRFDF
DLESGNDVLTVKNLSLRFDRQIFSNVSFEIKKGEKIALLGPNGIGKSSLLKILVGEIDNFEGEIKFGTNVITGYYEQEFK
SLNAEKTAIDEIWDENPYLTQTEVRTLLASFLFREEDVFKTISTLSGGEKARLSLLKLILSKANFLLMDEPTNHLDLKAK
EVLEEALLDYTGTLLFVSHDRYFIDKIATKVMILTPQGVEVYLGNYSYYIEKKNQLNEKKEETIKKTKTQIKNERYKERL
AKLKLKQQKEYLKNLENSIYQAEERIKYLEEKMCDAKIYKTGEIVEIQKEYNALKSKLEQMYEEWENLSG

Sequences:

>Translated_630_residues
MAIITVSNVTKSYGIDIILQNISFIVNEGDKIGVIGENGAGKSTLFNLLAGFTEADSGTISISTNKIGYLQQNTVIDSEK
SIYEEVKTVFDEIFQLEKQIKSLEEKISQTKDSHLLDKLFLEYSFLTDKYKELDGYSVESKIRGVLNGLGFDVSQFATTV
STLSGGQKTRLMLAKTLLLSPDVLLLDEPTNHLDINSIEWLEQYLKFYNGTILIISHDRYFLDKIVTRIFEIENTHLSVY
EGNYTEYLKRKKLEMEAKLKAYEEQQKEIKRIKSIIQIQKNRRTEKSVKMAESKQKLLEKMEIIEKPVINNKSINLRFDF
DLESGNDVLTVKNLSLRFDRQIFSNVSFEIKKGEKIALLGPNGIGKSSLLKILVGEIDNFEGEIKFGTNVITGYYEQEFK
SLNAEKTAIDEIWDENPYLTQTEVRTLLASFLFREEDVFKTISTLSGGEKARLSLLKLILSKANFLLMDEPTNHLDLKAK
EVLEEALLDYTGTLLFVSHDRYFIDKIATKVMILTPQGVEVYLGNYSYYIEKKNQLNEKKEETIKKTKTQIKNERYKERL
AKLKLKQQKEYLKNLENSIYQAEERIKYLEEKMCDAKIYKTGEIVEIQKEYNALKSKLEQMYEEWENLSG
>Mature_629_residues
AIITVSNVTKSYGIDIILQNISFIVNEGDKIGVIGENGAGKSTLFNLLAGFTEADSGTISISTNKIGYLQQNTVIDSEKS
IYEEVKTVFDEIFQLEKQIKSLEEKISQTKDSHLLDKLFLEYSFLTDKYKELDGYSVESKIRGVLNGLGFDVSQFATTVS
TLSGGQKTRLMLAKTLLLSPDVLLLDEPTNHLDINSIEWLEQYLKFYNGTILIISHDRYFLDKIVTRIFEIENTHLSVYE
GNYTEYLKRKKLEMEAKLKAYEEQQKEIKRIKSIIQIQKNRRTEKSVKMAESKQKLLEKMEIIEKPVINNKSINLRFDFD
LESGNDVLTVKNLSLRFDRQIFSNVSFEIKKGEKIALLGPNGIGKSSLLKILVGEIDNFEGEIKFGTNVITGYYEQEFKS
LNAEKTAIDEIWDENPYLTQTEVRTLLASFLFREEDVFKTISTLSGGEKARLSLLKLILSKANFLLMDEPTNHLDLKAKE
VLEEALLDYTGTLLFVSHDRYFIDKIATKVMILTPQGVEVYLGNYSYYIEKKNQLNEKKEETIKKTKTQIKNERYKERLA
KLKLKQQKEYLKNLENSIYQAEERIKYLEEKMCDAKIYKTGEIVEIQKEYNALKSKLEQMYEEWENLSG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=532, Percent_Identity=28.5714285714286, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI27881506, Length=553, Percent_Identity=28.9330922242315, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI10947137, Length=553, Percent_Identity=28.9330922242315, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI10947135, Length=534, Percent_Identity=29.4007490636704, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI69354671, Length=534, Percent_Identity=29.4007490636704, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI90421313, Length=219, Percent_Identity=27.8538812785388, Blast_Score=72, Evalue=2e-12,
Organism=Escherichia coli, GI1789751, Length=638, Percent_Identity=31.6614420062696, Blast_Score=336, Evalue=2e-93,
Organism=Escherichia coli, GI1787041, Length=540, Percent_Identity=35.9259259259259, Blast_Score=321, Evalue=1e-88,
Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=33.8738738738739, Blast_Score=288, Evalue=8e-79,
Organism=Escherichia coli, GI1787182, Length=654, Percent_Identity=30.8868501529052, Blast_Score=274, Evalue=2e-74,
Organism=Escherichia coli, GI87081782, Length=526, Percent_Identity=24.3346007604563, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788165, Length=196, Percent_Identity=27.0408163265306, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1789593, Length=265, Percent_Identity=24.1509433962264, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1786698, Length=223, Percent_Identity=30.0448430493274, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1788053, Length=220, Percent_Identity=26.3636363636364, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789864, Length=236, Percent_Identity=24.1525423728814, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1790525, Length=233, Percent_Identity=29.1845493562232, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1789672, Length=222, Percent_Identity=26.1261261261261, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789873, Length=240, Percent_Identity=25.4166666666667, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1786872, Length=238, Percent_Identity=26.0504201680672, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=566, Percent_Identity=28.7985865724382, Blast_Score=242, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI17555318, Length=553, Percent_Identity=28.9330922242315, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI17553372, Length=546, Percent_Identity=30.03663003663, Blast_Score=222, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI71988343, Length=228, Percent_Identity=28.5087719298246, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25146777, Length=173, Percent_Identity=31.2138728323699, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=526, Percent_Identity=32.1292775665399, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6321121, Length=540, Percent_Identity=29.6296296296296, Blast_Score=224, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6325030, Length=396, Percent_Identity=29.2929292929293, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6323278, Length=388, Percent_Identity=28.6082474226804, Blast_Score=137, Evalue=7e-33,
Organism=Saccharomyces cerevisiae, GI6324314, Length=387, Percent_Identity=27.1317829457364, Blast_Score=126, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6323217, Length=266, Percent_Identity=26.6917293233083, Blast_Score=71, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6322980, Length=234, Percent_Identity=26.9230769230769, Blast_Score=68, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322640, Length=223, Percent_Identity=26.9058295964126, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24666836, Length=534, Percent_Identity=31.0861423220974, Blast_Score=261, Evalue=1e-69,
Organism=Drosophila melanogaster, GI24641342, Length=553, Percent_Identity=29.8372513562387, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24642252, Length=553, Percent_Identity=29.2947558770344, Blast_Score=241, Evalue=1e-63,
Organism=Drosophila melanogaster, GI18859989, Length=553, Percent_Identity=29.2947558770344, Blast_Score=241, Evalue=1e-63,
Organism=Drosophila melanogaster, GI17136662, Length=210, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI45550390, Length=214, Percent_Identity=27.1028037383178, Blast_Score=66, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72691; Mature: 72560

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIITVSNVTKSYGIDIILQNISFIVNEGDKIGVIGENGAGKSTLFNLLAGFTEADSGTI
CEEEEEECCHHHHCHHHHEEHHHHHEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEE
SISTNKIGYLQQNTVIDSEKSIYEEVKTVFDEIFQLEKQIKSLEEKISQTKDSHLLDKLF
EEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LEYSFLTDKYKELDGYSVESKIRGVLNGLGFDVSQFATTVSTLSGGQKTRLMLAKTLLLS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDVLLLDEPTNHLDINSIEWLEQYLKFYNGTILIISHDRYFLDKIVTRIFEIENTHLSVY
CCEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEE
EGNYTEYLKRKKLEMEAKLKAYEEQQKEIKRIKSIIQIQKNRRTEKSVKMAESKQKLLEK
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MEIIEKPVINNKSINLRFDFDLESGNDVLTVKNLSLRFDRQIFSNVSFEIKKGEKIALLG
HHHHHCCCCCCCEEEEEEEEECCCCCCEEEEECCCHHHHHHHHCCCCEEEECCCEEEEEC
PNGIGKSSLLKILVGEIDNFEGEIKFGTNVITGYYEQEFKSLNAEKTAIDEIWDENPYLT
CCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
QTEVRTLLASFLFREEDVFKTISTLSGGEKARLSLLKLILSKANFLLMDEPTNHLDLKAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH
EVLEEALLDYTGTLLFVSHDRYFIDKIATKVMILTPQGVEVYLGNYSYYIEKKNQLNEKK
HHHHHHHHCCCCEEEEEECCHHHHHHHHCEEEEECCCCCEEEECCEEEEEECCHHCCHHH
EETIKKTKTQIKNERYKERLAKLKLKQQKEYLKNLENSIYQAEERIKYLEEKMCDAKIYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC
TGEIVEIQKEYNALKSKLEQMYEEWENLSG
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIITVSNVTKSYGIDIILQNISFIVNEGDKIGVIGENGAGKSTLFNLLAGFTEADSGTI
EEEEEECCHHHHCHHHHEEHHHHHEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEE
SISTNKIGYLQQNTVIDSEKSIYEEVKTVFDEIFQLEKQIKSLEEKISQTKDSHLLDKLF
EEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LEYSFLTDKYKELDGYSVESKIRGVLNGLGFDVSQFATTVSTLSGGQKTRLMLAKTLLLS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDVLLLDEPTNHLDINSIEWLEQYLKFYNGTILIISHDRYFLDKIVTRIFEIENTHLSVY
CCEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEE
EGNYTEYLKRKKLEMEAKLKAYEEQQKEIKRIKSIIQIQKNRRTEKSVKMAESKQKLLEK
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MEIIEKPVINNKSINLRFDFDLESGNDVLTVKNLSLRFDRQIFSNVSFEIKKGEKIALLG
HHHHHCCCCCCCEEEEEEEEECCCCCCEEEEECCCHHHHHHHHCCCCEEEECCCEEEEEC
PNGIGKSSLLKILVGEIDNFEGEIKFGTNVITGYYEQEFKSLNAEKTAIDEIWDENPYLT
CCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
QTEVRTLLASFLFREEDVFKTISTLSGGEKARLSLLKLILSKANFLLMDEPTNHLDLKAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH
EVLEEALLDYTGTLLFVSHDRYFIDKIATKVMILTPQGVEVYLGNYSYYIEKKNQLNEKK
HHHHHHHHCCCCEEEEEECCHHHHHHHHCEEEEECCCCCEEEECCEEEEEECCHHCCHHH
EETIKKTKTQIKNERYKERLAKLKLKQQKEYLKNLENSIYQAEERIKYLEEKMCDAKIYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC
TGEIVEIQKEYNALKSKLEQMYEEWENLSG
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]