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The map label for this gene is yidA [H]

Identifier: 167039098

GI number: 167039098

Start: 451089

End: 451910

Strand: Direct

Name: yidA [H]

Synonym: Teth514_0437

Alternate gene names: 167039098

Gene position: 451089-451910 (Clockwise)

Preceding gene: 167039095

Following gene: 167039099

Centisome position: 18.36

GC content: 33.33

Gene sequence:

>822_bases
ATGTATAAACTTTTTGTCACAGATGCTGATGGGAGCTTATTAAATAGTAATTCTGAAATCTCTGATAAAAATAAAGAAGC
AATAAAAGAGGTGATTTCAAGGGGAGTCATTTTTACTATTGCTACTGGACGTATGTTTTCTTCTATACTACCTTATGCTC
TTGAGCTTAATATTAATGCTCCAGTGATTTCTTATAATGGTGCTTTAATAAAAGATATTTATACTAAAAAGGTGTACTAT
TACAATCCTATACAGACAGAAGATGCGATATTTGCGATAAGATTGTTAAAAGAAATTGGATATCATATAAACCTCTATAT
CGATGATGAGCTATACGTGGAAGAAATAACTGATAGAGTAGAGTGGTACCTTTCTTTTAACAATGTTACTGTAAATGCGG
TGGGGAATTTAGAGGAATTTCTTAAAAGGACGGGAGGCGTGACGGCTAAAATCTATGCGATAAATGATATGAAAAATCCT
ATTTCTATTGATGCAGAAATTTACGACGAAATTTCAAAAAGATTAACCATTTCTACTTCTGGAGGAGGACATTTAGAGAT
TAATGCAAAAGGAGTAAGCAAGGGCAATGCTTTAAAAACTCTTGCCAATATGTACAGTATAAAAAGAGAGCAGGTAGTGG
CGATTGGAGACAATCTAAATGACCTGTCAATGATAGAATATGCAGGATTGGGAGTAGCTATGGGGAACGCTCCTGACATT
GTAAAGATAAAAGCGGATTATACAACTTTATCAAATGATGAAGATGGAGTTGCTCATGCAATAGATAAATTTTTCTTAAA
TAAAAAGACAGTAGCAGTATAG

Upstream 100 bases:

>100_bases
TTCAGTGGTAACGTTTTATAACAATTTATGATATAGTATGTAAATTTACAAACTGTTATAATATAGATGAGGGATAAATA
AAAAATAGGGGTTGAAGAAT

Downstream 100 bases:

>100_bases
TAACTAGTTTAAACAAAAGGGAATAAAATATATTACCGCCAGGCGGTAATATATTTTTTTATTTTAGGTGATGACCATGG
AAGGTATGATTATAAAATTT

Product: Cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MYKLFVTDADGSLLNSNSEISDKNKEAIKEVISRGVIFTIATGRMFSSILPYALELNINAPVISYNGALIKDIYTKKVYY
YNPIQTEDAIFAIRLLKEIGYHINLYIDDELYVEEITDRVEWYLSFNNVTVNAVGNLEEFLKRTGGVTAKIYAINDMKNP
ISIDAEIYDEISKRLTISTSGGGHLEINAKGVSKGNALKTLANMYSIKREQVVAIGDNLNDLSMIEYAGLGVAMGNAPDI
VKIKADYTTLSNDEDGVAHAIDKFFLNKKTVAV

Sequences:

>Translated_273_residues
MYKLFVTDADGSLLNSNSEISDKNKEAIKEVISRGVIFTIATGRMFSSILPYALELNINAPVISYNGALIKDIYTKKVYY
YNPIQTEDAIFAIRLLKEIGYHINLYIDDELYVEEITDRVEWYLSFNNVTVNAVGNLEEFLKRTGGVTAKIYAINDMKNP
ISIDAEIYDEISKRLTISTSGGGHLEINAKGVSKGNALKTLANMYSIKREQVVAIGDNLNDLSMIEYAGLGVAMGNAPDI
VKIKADYTTLSNDEDGVAHAIDKFFLNKKTVAV
>Mature_273_residues
MYKLFVTDADGSLLNSNSEISDKNKEAIKEVISRGVIFTIATGRMFSSILPYALELNINAPVISYNGALIKDIYTKKVYY
YNPIQTEDAIFAIRLLKEIGYHINLYIDDELYVEEITDRVEWYLSFNNVTVNAVGNLEEFLKRTGGVTAKIYAINDMKNP
ISIDAEIYDEISKRLTISTSGGGHLEINAKGVSKGNALKTLANMYSIKREQVVAIGDNLNDLSMIEYAGLGVAMGNAPDI
VKIKADYTTLSNDEDGVAHAIDKFFLNKKTVAV

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=280, Percent_Identity=33.9285714285714, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786982, Length=266, Percent_Identity=29.6992481203008, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI48994981, Length=273, Percent_Identity=27.8388278388278, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787043, Length=260, Percent_Identity=25, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI87081790, Length=279, Percent_Identity=25.089605734767, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87081741, Length=253, Percent_Identity=22.1343873517787, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30277; Mature: 30277

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLFVTDADGSLLNSNSEISDKNKEAIKEVISRGVIFTIATGRMFSSILPYALELNINA
CEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHCCEEEEEECCHHHHHHCCEEEEEECCC
PVISYNGALIKDIYTKKVYYYNPIQTEDAIFAIRLLKEIGYHINLYIDDELYVEEITDRV
CEEEECCEEEEHHHHCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHE
EWYLSFNNVTVNAVGNLEEFLKRTGGVTAKIYAINDMKNPISIDAEIYDEISKRLTISTS
EEEEEECCEEEEECCCHHHHHHHHCCCEEEEEEEECCCCCEEECHHHHHHHHHEEEEEEC
GGGHLEINAKGVSKGNALKTLANMYSIKREQVVAIGDNLNDLSMIEYAGLGVAMGNAPDI
CCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCEEEECCCCCE
VKIKADYTTLSNDEDGVAHAIDKFFLNKKTVAV
EEEEECCEECCCCCCHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MYKLFVTDADGSLLNSNSEISDKNKEAIKEVISRGVIFTIATGRMFSSILPYALELNINA
CEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHCCEEEEEECCHHHHHHCCEEEEEECCC
PVISYNGALIKDIYTKKVYYYNPIQTEDAIFAIRLLKEIGYHINLYIDDELYVEEITDRV
CEEEECCEEEEHHHHCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHE
EWYLSFNNVTVNAVGNLEEFLKRTGGVTAKIYAINDMKNPISIDAEIYDEISKRLTISTS
EEEEEECCEEEEECCCHHHHHHHHCCCEEEEEEEECCCCCEEECHHHHHHHHHEEEEEEC
GGGHLEINAKGVSKGNALKTLANMYSIKREQVVAIGDNLNDLSMIEYAGLGVAMGNAPDI
CCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCEEEECCCCCE
VKIKADYTTLSNDEDGVAHAIDKFFLNKKTVAV
EEEEECCEECCCCCCHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]