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The map label for this gene is ccpA [H]

Identifier: 167039099

GI number: 167039099

Start: 452228

End: 453244

Strand: Direct

Name: ccpA [H]

Synonym: Teth514_0438

Alternate gene names: 167039099

Gene position: 452228-453244 (Clockwise)

Preceding gene: 167039098

Following gene: 167039100

Centisome position: 18.4

GC content: 36.68

Gene sequence:

>1017_bases
ATGAGTGCAACGATAAAAGATGTGGCGAGAGAAGCAAAGGTTTCAATTGCTACGGTTTCTAGAGTATTAAATAACAGTGC
TGTTGTTACAGACGAGACGAGGCAGAGAGTGTTAGAGGCTATAAAAAAGACAGGATATAAGCCTAATGCGTTAGCACGTA
GTTTAAAGATCCAAAAGACTCATACTATAGGGCTTATAGTCCCTGATATTTCTAGTACTTTCTATCCTGAGGTAGTTAGA
GGAATAGAGGATATTGCTGCGATGTATAATTATAACATATTTTTGTGCAATACTGACCAAAAAGAGGAAAAGGAAGTCAA
ATATATAGAAATATTAGGAGAAAAGCAAGTAGACGGAATTATCTTTATGGGGGATATAGTAAGGGATAGTGTTATACAAA
CGTTTAACGAATTTGGTGTACCAGTGGTGCTGGCAGGTACTCAGGACAAAGATAAGAGATTTCCTAGTGTTATGATTGAT
AATGAAAAAGCTGCATACGACGCAGTAAAATACTTGATTTCTTTAGGACGCAAAAAAATAGGTATGATTTCAGGACCTAT
GCATGACCCTATAGGAGGGCTTCAAAGGATTGAAGGTTACAAGAGAGCTCTCGAAGAACACGGCATAAAATATGATCCTG
AATTAGTAGTAGAAGGAGAGTTTAAAACTCGCAAAGCGTATTTAGCTATGCTAAAGCTTTTAGAATACAAGGTAGATGCA
GTATTTGCAGCATCAGATGATATGGCAGCTGCTGCCATAAACGCCATATTTGACTCAAATCTTAAAGTGCCAGAAAACAT
CCATGTAGTAGGTTTTGACAATACTTACATTTCTACTATTTTTAGACCGACGATTACTACAATACAACAGCCTGCTTATG
ACATAGGGGCTGTAAGCATGAGACTTTTAACAAAACTTTTAGCAAAAGAACCTATTGAAGAAATGCATGTTATTTTGCCT
CATCAGTTGATTGTAAGAGAATCTACTGGCTTTGGAGAAGAAAAAAATAGCCGATAA

Upstream 100 bases:

>100_bases
GAAAATGAATGAAAAAAATTGAAAAAATCTATTGACAAAATTCTTTTTAAAAAGTAAAATAACATAAAGCGAAAACGATT
AATCCTGGGAGTGATGTACA

Downstream 100 bases:

>100_bases
GGCTATTTTTTTTATAAATTGTTGTGGTATACTGGTGTCAGGAGGGAGGTATATATGGAAAAATTGTTAATTATAGATGA
TGAAGAGATGTTTGTAAAAG

Product: alanine racemase

Products: NA

Alternate protein names: Glucose-resistance amylase regulator [H]

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSATIKDVAREAKVSIATVSRVLNNSAVVTDETRQRVLEAIKKTGYKPNALARSLKIQKTHTIGLIVPDISSTFYPEVVR
GIEDIAAMYNYNIFLCNTDQKEEKEVKYIEILGEKQVDGIIFMGDIVRDSVIQTFNEFGVPVVLAGTQDKDKRFPSVMID
NEKAAYDAVKYLISLGRKKIGMISGPMHDPIGGLQRIEGYKRALEEHGIKYDPELVVEGEFKTRKAYLAMLKLLEYKVDA
VFAASDDMAAAAINAIFDSNLKVPENIHVVGFDNTYISTIFRPTITTIQQPAYDIGAVSMRLLTKLLAKEPIEEMHVILP
HQLIVRESTGFGEEKNSR

Sequences:

>Translated_338_residues
MSATIKDVAREAKVSIATVSRVLNNSAVVTDETRQRVLEAIKKTGYKPNALARSLKIQKTHTIGLIVPDISSTFYPEVVR
GIEDIAAMYNYNIFLCNTDQKEEKEVKYIEILGEKQVDGIIFMGDIVRDSVIQTFNEFGVPVVLAGTQDKDKRFPSVMID
NEKAAYDAVKYLISLGRKKIGMISGPMHDPIGGLQRIEGYKRALEEHGIKYDPELVVEGEFKTRKAYLAMLKLLEYKVDA
VFAASDDMAAAAINAIFDSNLKVPENIHVVGFDNTYISTIFRPTITTIQQPAYDIGAVSMRLLTKLLAKEPIEEMHVILP
HQLIVRESTGFGEEKNSR
>Mature_337_residues
SATIKDVAREAKVSIATVSRVLNNSAVVTDETRQRVLEAIKKTGYKPNALARSLKIQKTHTIGLIVPDISSTFYPEVVRG
IEDIAAMYNYNIFLCNTDQKEEKEVKYIEILGEKQVDGIIFMGDIVRDSVIQTFNEFGVPVVLAGTQDKDKRFPSVMIDN
EKAAYDAVKYLISLGRKKIGMISGPMHDPIGGLQRIEGYKRALEEHGIKYDPELVVEGEFKTRKAYLAMLKLLEYKVDAV
FAASDDMAAAAINAIFDSNLKVPENIHVVGFDNTYISTIFRPTITTIQQPAYDIGAVSMRLLTKLLAKEPIEEMHVILPH
QLIVRESTGFGEEKNSR

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes such as the alpha- amylase (AmyE) and the acetyl-coenzyme A synthetase (AcsA); and in the positive regulation of genes involved in excretion of excess carbon such

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790369, Length=331, Percent_Identity=37.7643504531722, Blast_Score=218, Evalue=6e-58,
Organism=Escherichia coli, GI1787948, Length=340, Percent_Identity=32.6470588235294, Blast_Score=194, Evalue=8e-51,
Organism=Escherichia coli, GI1790194, Length=330, Percent_Identity=33.030303030303, Blast_Score=184, Evalue=9e-48,
Organism=Escherichia coli, GI1789068, Length=300, Percent_Identity=29.6666666666667, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1788474, Length=290, Percent_Identity=32.4137931034483, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1789202, Length=333, Percent_Identity=31.2312312312312, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1787580, Length=319, Percent_Identity=30.0940438871473, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1786540, Length=332, Percent_Identity=26.2048192771084, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787906, Length=336, Percent_Identity=25.8928571428571, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI48994940, Length=308, Percent_Identity=25.3246753246753, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1790715, Length=307, Percent_Identity=25.7328990228013, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1790689, Length=294, Percent_Identity=25.1700680272109, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786268, Length=120, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1789456, Length=343, Percent_Identity=24.7813411078717, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37760; Mature: 37629

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATIKDVAREAKVSIATVSRVLNNSAVVTDETRQRVLEAIKKTGYKPNALARSLKIQKT
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHEEEEE
HTIGLIVPDISSTFYPEVVRGIEDIAAMYNYNIFLCNTDQKEEKEVKYIEILGEKQVDGI
EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
IFMGDIVRDSVIQTFNEFGVPVVLAGTQDKDKRFPSVMIDNEKAAYDAVKYLISLGRKKI
EEEHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCCEEECCCHHHHHHHHHHHHHCCHHH
GMISGPMHDPIGGLQRIEGYKRALEEHGIKYDPELVVEGEFKTRKAYLAMLKLLEYKVDA
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHE
VFAASDDMAAAAINAIFDSNLKVPENIHVVGFDNTYISTIFRPTITTIQQPAYDIGAVSM
EEECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHH
RLLTKLLAKEPIEEMHVILPHQLIVRESTGFGEEKNSR
HHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SATIKDVAREAKVSIATVSRVLNNSAVVTDETRQRVLEAIKKTGYKPNALARSLKIQKT
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHEEEEE
HTIGLIVPDISSTFYPEVVRGIEDIAAMYNYNIFLCNTDQKEEKEVKYIEILGEKQVDGI
EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
IFMGDIVRDSVIQTFNEFGVPVVLAGTQDKDKRFPSVMIDNEKAAYDAVKYLISLGRKKI
EEEHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCCEEECCCHHHHHHHHHHHHHCCHHH
GMISGPMHDPIGGLQRIEGYKRALEEHGIKYDPELVVEGEFKTRKAYLAMLKLLEYKVDA
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHE
VFAASDDMAAAAINAIFDSNLKVPENIHVVGFDNTYISTIFRPTITTIQQPAYDIGAVSM
EEECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHH
RLLTKLLAKEPIEEMHVILPHQLIVRESTGFGEEKNSR
HHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1904524; 9387221; 9384377 [H]