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The map label for this gene is panD

Identifier: 167039086

GI number: 167039086

Start: 441268

End: 441621

Strand: Reverse

Name: panD

Synonym: Teth514_0425

Alternate gene names: 167039086

Gene position: 441621-441268 (Counterclockwise)

Preceding gene: 167039087

Following gene: 167039060

Centisome position: 17.97

GC content: 33.05

Gene sequence:

>354_bases
ATGCAAAGGTTTATGATGAAATCTAAAATACACAGAGCAATTGTAACAGATGCCAACTTAAATTACCAGGGTTCTATAAC
AATTGATAAAAATTTAATGGAACTTGCTGATATACTGCCAAATGAAAAAGTACAAGTTTTAAATATCAACAACGGTGCAC
GATTTGACACTTACGCAATAGAAGGCGAAAGAGGCTCAGGTACAATATGCATAAACGGCGCAGCAGCAAGACTATGTCAG
GTAGGCGATATAATCATCATAATATCTTATGCAATAATGGATGATGAGGAAGCCAAAAATTATAAGCCTAAAGTAATATT
TGTAGATGAAAACAATAAACCTGTAAATATGTAA

Upstream 100 bases:

>100_bases
AAGACTTAACTTATATAAAAGATAAAGCACTTATTGCAATAGCTTGCTTTATTGGGACAACAAGGCTTATAGATAATCTA
TTGTGGGGGGAAAATATATA

Downstream 100 bases:

>100_bases
AAATTTAATGGTACAAGGTACATATTTAAAGTACCTGGTACCATTAAATATAAGCCCCTTGCTTTAATAAAATGTTTCTC
AACATTTCTACATCAACATT

Product: aspartate 1-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MQRFMMKSKIHRAIVTDANLNYQGSITIDKNLMELADILPNEKVQVLNINNGARFDTYAIEGERGSGTICINGAAARLCQ
VGDIIIIISYAIMDDEEAKNYKPKVIFVDENNKPVNM

Sequences:

>Translated_117_residues
MQRFMMKSKIHRAIVTDANLNYQGSITIDKNLMELADILPNEKVQVLNINNGARFDTYAIEGERGSGTICINGAAARLCQ
VGDIIIIISYAIMDDEEAKNYKPKVIFVDENNKPVNM
>Mature_117_residues
MQRFMMKSKIHRAIVTDANLNYQGSITIDKNLMELADILPNEKVQVLNINNGARFDTYAIEGERGSGTICINGAAARLCQ
VGDIIIIISYAIMDDEEAKNYKPKVIFVDENNKPVNM

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=113, Percent_Identity=47.787610619469, Blast_Score=120, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_THEP3 (B0KC92)

Other databases:

- EMBL:   CP000924
- RefSeq:   YP_001665782.1
- ProteinModelPortal:   B0KC92
- SMR:   B0KC92
- GeneID:   5874471
- GenomeReviews:   CP000924_GR
- KEGG:   tpd:Teth39_1810
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   CLSK986015
- BioCyc:   TPSE340099:TETH39_1810-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 13093; Mature: 13093

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFMMKSKIHRAIVTDANLNYQGSITIDKNLMELADILPNEKVQVLNINNGARFDTYAI
CCCHHHHHHHHEEEEECCCCCEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCEEEEEEE
EGERGSGTICINGAAARLCQVGDIIIIISYAIMDDEEAKNYKPKVIFVDENNKPVNM
ECCCCCCEEEECCHHHHHHHCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MQRFMMKSKIHRAIVTDANLNYQGSITIDKNLMELADILPNEKVQVLNINNGARFDTYAI
CCCHHHHHHHHEEEEECCCCCEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCEEEEEEE
EGERGSGTICINGAAARLCQVGDIIIIISYAIMDDEEAKNYKPKVIFVDENNKPVNM
ECCCCCCEEEECCHHHHHHHCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA