| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is malE [C]
Identifier: 167039060
GI number: 167039060
Start: 406397
End: 407683
Strand: Reverse
Name: malE [C]
Synonym: Teth514_0397
Alternate gene names: 167039060
Gene position: 407683-406397 (Counterclockwise)
Preceding gene: 167039086
Following gene: 167039059
Centisome position: 16.59
GC content: 36.05
Gene sequence:
>1287_bases ATGGGTAAAAAAAATAAAATCCTGACATCAATAGTTTCACTGGCATTAATAGGAACTTTAATTGCCGGTTGTGGTTCTAA CACGACCTCATCTACTTCAAGTAATACTTCTAAGAATGAACCAATCACAATTACTTATTCTACAGGTAAAGACTCTACAC CAGCAACCCAAAAATTAGTCGAAGCTTTTGAAAAAAAATATCCAAACATTAAAGTCAAAGTTCAAGAACTACCTAACTCT ACAGATGACCAGCATAATTCATATGTTACTGCATTGTCAGCAGGAGATTCAAGTATTGATGTTTTAGCAATGGACATTAT TTGGACACCTGAATTTGCTGCTGCTAATTGGTTACTCCCGTTAGATGATAAATTTACAAAAGAAATGAGAGATAAGTTTT TACCAGGACCCGTTGAAGCAGTAACATATAATGGCCATGTGTGGGCAGTGCCAAGATTTACAGACGCAGGAGTCCTTTAT TATAGAAAAGATATCATAGATACTCCTCCAAAAACTTGGGATGAATTAATTCAAATGGCAAAAGAAAACGTTGGTAAAGG TGGTACTAAATACGGAATAGTATTTCAAGGCAATCAATATGAAGGTTTAGTTTGCGATGCTTTAGAGCTTATAGGAAGCA ATGGTGGAAGTGTTCTTGAAGGAGACAAAGTCACAATAGACACACCACAAGCAGTAGCAGGACTTCAATACTTGATAGAT TTAGTAAAAATTGCTCCTCCAGGTGTAACAACATATCAAGAAGAAGATGCGAGGAATGTATTCCAACAAGGTGAAGCAAT TTTCATGAGAAACTGGCCTTATGCATGGTCTCTAGTAAATGGAGATGATTCCCCAGTAAAAGGTAAAGTAGGTATAGCTC CAATTCCAAGAGGAAAAGACGGCGAAGTTGGCACTCCAGTTTTAGGTGGATGGAATCTCGGTATAAACAAATACTCAAAG CATCCTGAAGAAGCATGGAAATTTATAGAATTTGTTACAAGTGAAGAAGGTCAAAAGGTAACCGCTTTAGAAGGCGGCAA TCTCCCAACAATAAAATCTTTATATCAGGACAAAGAAGTTTTAGCAAAAAATCCCTATTGGGCAGATTTTTATGATGTAT TCATAACAGCTAAACCAAGGCCTGTATCTCCTTTTTATCCTCAAATGTCTGATTCAATGCAAATAAACTTTCACAAAGCT TTGACAGGAGAAATAACAGCACAGCAAGCTATACAAAACATAGCGAAAGATTTGAATGACATAATTAAAAACGAAGGTAA AAAGTAA
Upstream 100 bases:
>100_bases TAAAAAAATACACAAAATATTAAAAATGTCACATTATTTTTGCAACCGATTTCTTATATAATTATTATACAACACCAATA CTATTTAAGGGGGAATTTAG
Downstream 100 bases:
>100_bases ATTTTTAAAGGTACTTCTTCATACAAATCCAAAGTGGCAGCTTTTTGCTGCCACTTAATATAAAAAAGAGGTGATAACGT GGTAGAACAAAAAAATTTAA
Product: extracellular solute-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MGKKNKILTSIVSLALIGTLIAGCGSNTTSSTSSNTSKNEPITITYSTGKDSTPATQKLVEAFEKKYPNIKVKVQELPNS TDDQHNSYVTALSAGDSSIDVLAMDIIWTPEFAAANWLLPLDDKFTKEMRDKFLPGPVEAVTYNGHVWAVPRFTDAGVLY YRKDIIDTPPKTWDELIQMAKENVGKGGTKYGIVFQGNQYEGLVCDALELIGSNGGSVLEGDKVTIDTPQAVAGLQYLID LVKIAPPGVTTYQEEDARNVFQQGEAIFMRNWPYAWSLVNGDDSPVKGKVGIAPIPRGKDGEVGTPVLGGWNLGINKYSK HPEEAWKFIEFVTSEEGQKVTALEGGNLPTIKSLYQDKEVLAKNPYWADFYDVFITAKPRPVSPFYPQMSDSMQINFHKA LTGEITAQQAIQNIAKDLNDIIKNEGKK
Sequences:
>Translated_428_residues MGKKNKILTSIVSLALIGTLIAGCGSNTTSSTSSNTSKNEPITITYSTGKDSTPATQKLVEAFEKKYPNIKVKVQELPNS TDDQHNSYVTALSAGDSSIDVLAMDIIWTPEFAAANWLLPLDDKFTKEMRDKFLPGPVEAVTYNGHVWAVPRFTDAGVLY YRKDIIDTPPKTWDELIQMAKENVGKGGTKYGIVFQGNQYEGLVCDALELIGSNGGSVLEGDKVTIDTPQAVAGLQYLID LVKIAPPGVTTYQEEDARNVFQQGEAIFMRNWPYAWSLVNGDDSPVKGKVGIAPIPRGKDGEVGTPVLGGWNLGINKYSK HPEEAWKFIEFVTSEEGQKVTALEGGNLPTIKSLYQDKEVLAKNPYWADFYDVFITAKPRPVSPFYPQMSDSMQINFHKA LTGEITAQQAIQNIAKDLNDIIKNEGKK >Mature_427_residues GKKNKILTSIVSLALIGTLIAGCGSNTTSSTSSNTSKNEPITITYSTGKDSTPATQKLVEAFEKKYPNIKVKVQELPNST DDQHNSYVTALSAGDSSIDVLAMDIIWTPEFAAANWLLPLDDKFTKEMRDKFLPGPVEAVTYNGHVWAVPRFTDAGVLYY RKDIIDTPPKTWDELIQMAKENVGKGGTKYGIVFQGNQYEGLVCDALELIGSNGGSVLEGDKVTIDTPQAVAGLQYLIDL VKIAPPGVTTYQEEDARNVFQQGEAIFMRNWPYAWSLVNGDDSPVKGKVGIAPIPRGKDGEVGTPVLGGWNLGINKYSKH PEEAWKFIEFVTSEEGQKVTALEGGNLPTIKSLYQDKEVLAKNPYWADFYDVFITAKPRPVSPFYPQMSDSMQINFHKAL TGEITAQQAIQNIAKDLNDIIKNEGKK
Specific function: Probably part of a binding-protein-dependent transport system [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790466, Length=298, Percent_Identity=29.5302013422819, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46983; Mature: 46851
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKNKILTSIVSLALIGTLIAGCGSNTTSSTSSNTSKNEPITITYSTGKDSTPATQKLV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH EAFEKKYPNIKVKVQELPNSTDDQHNSYVTALSAGDSSIDVLAMDIIWTPEFAAANWLLP HHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCHHHCCCEEC LDDKFTKEMRDKFLPGPVEAVTYNGHVWAVPRFTDAGVLYYRKDIIDTPPKTWDELIQMA CCHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCCCCEEEEEHHHCCCCCHHHHHHHHHH KENVGKGGTKYGIVFQGNQYEGLVCDALELIGSNGGSVLEGDKVTIDTPQAVAGLQYLID HHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEECCEEEEECHHHHHHHHHHHH LVKIAPPGVTTYQEEDARNVFQQGEAIFMRNWPYAWSLVNGDDSPVKGKVGIAPIPRGKD HHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCC GEVGTPVLGGWNLGINKYSKHPEEAWKFIEFVTSEEGQKVTALEGGNLPTIKSLYQDKEV CCCCCCEECCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCHHH LAKNPYWADFYDVFITAKPRPVSPFYPQMSDSMQINFHKALTGEITAQQAIQNIAKDLND HHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHH IIKNEGKK HHHCCCCC >Mature Secondary Structure GKKNKILTSIVSLALIGTLIAGCGSNTTSSTSSNTSKNEPITITYSTGKDSTPATQKLV CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH EAFEKKYPNIKVKVQELPNSTDDQHNSYVTALSAGDSSIDVLAMDIIWTPEFAAANWLLP HHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCHHHCCCEEC LDDKFTKEMRDKFLPGPVEAVTYNGHVWAVPRFTDAGVLYYRKDIIDTPPKTWDELIQMA CCHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCCCCEEEEEHHHCCCCCHHHHHHHHHH KENVGKGGTKYGIVFQGNQYEGLVCDALELIGSNGGSVLEGDKVTIDTPQAVAGLQYLID HHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEECCEEEEECHHHHHHHHHHHH LVKIAPPGVTTYQEEDARNVFQQGEAIFMRNWPYAWSLVNGDDSPVKGKVGIAPIPRGKD HHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCC GEVGTPVLGGWNLGINKYSKHPEEAWKFIEFVTSEEGQKVTALEGGNLPTIKSLYQDKEV CCCCCCEECCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCHHH LAKNPYWADFYDVFITAKPRPVSPFYPQMSDSMQINFHKALTGEITAQQAIQNIAKDLND HHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHH IIKNEGKK HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]