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The map label for this gene is xylR [H]

Identifier: 167039078

GI number: 167039078

Start: 429873

End: 430994

Strand: Direct

Name: xylR [H]

Synonym: Teth514_0417

Alternate gene names: 167039078

Gene position: 429873-430994 (Clockwise)

Preceding gene: 167039077

Following gene: 167039079

Centisome position: 17.49

GC content: 27.72

Gene sequence:

>1122_bases
ATGGCTTTTAATAGTAAAGTATCAAAAGAACTGAATAAAGAACTGATTCTATCCTGTATAAGAAATGAAGAATTTATTTC
AAAAATTGAAATTTCAAAAATTACTGGTATTAGTCTACCGTCTGTATCAAAAATAGTGGATGAGTTAGTGGAAGAGGGAA
AAATAATACAATCGGGTATAGGTGATTCATCGGGAGGTAGAAAGCCTGTTCTGTATAAATTTAATAAGAATTTTGGATAC
TTTAGCACCGTGATTATCAATAAAACTGATATGAGCGTTTATTTAATGAACTTATATGGTGATATCATTGCAAAGGATAA
AATAAGTGTAAATGGTGCAGATGGTAATGATTTAGTATTTTCTATTGTTAGCGGAATTACACGTATTTTAAGCAGTTATA
ACATATTTGTTGACAAACTTTTAAACATTTGCATAGCTGCACCTGGATATTTTGATTATATTGAAAATAGATTTTTAATA
AAAGGAATACAATCTCTAAAAGATGTTGATTTACATGAAAAATTAAGTAAAAAATTTCCGAATGTTAAAATTAAATTTGC
AAGTGATATTCATATGATGGCACTTGGGGAATGGTCAAAAGTAAAGAATAAAGCCGAAAAAAAGAGAATTGTTGTAATAA
ATATAGACAGAGATCTGAGAGAAAATGCTTGTTTTGCAATTGTAGATAATGGGAATATATTAAAACCAGGGAGAGGATAC
CTCGGAAGAATTGAAGAAAGTATGATATCTTTAGTTGATATTAATATATTGAGAAAAAACGGATACGAAGAAATTGGGAA
ATTAATTAATGATTTTAAATCTAATAAAACACGAGCTATAAATCTTTTGATGAATTTGGTGGATTTTTTAACAAAAATAA
TAAAACACATCCAGCATTATATAGATCCAGACTGTATTATATTTCACGGATATATAGGACATCAAGGTTTAATAGATATT
GTTAAAGCAAAGCTTCAAGGAGATAATTTATTATGTGATATTCAGAAATCATTACTTAACGAAGAAGCTACATTATATGG
TTGTATAGAGGAAACTCTATCAACTTTATTTAACCAGTATGAAATGCCGATAAAAATCCACAATGTGGATTTTTATAAAT
AA

Upstream 100 bases:

>100_bases
AAATACTAACTAATTTAATTTAAATAAGTATTATAAAAAGTAAATAAAGAAACCTAACGAGGTCTATTTTATAAAATGAC
GAAAATAATAGGAGGTTATT

Downstream 100 bases:

>100_bases
AATAGTTAAATCCAAAATAAAGCAAATATCAAAGTAAAAAATATCATTATTAGCAATTAAATAGTAAATTAAGCCTTGAT
ATGAGTTTAAACATGGAACA

Product: transcriptional regulator/sugar kinase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MAFNSKVSKELNKELILSCIRNEEFISKIEISKITGISLPSVSKIVDELVEEGKIIQSGIGDSSGGRKPVLYKFNKNFGY
FSTVIINKTDMSVYLMNLYGDIIAKDKISVNGADGNDLVFSIVSGITRILSSYNIFVDKLLNICIAAPGYFDYIENRFLI
KGIQSLKDVDLHEKLSKKFPNVKIKFASDIHMMALGEWSKVKNKAEKKRIVVINIDRDLRENACFAIVDNGNILKPGRGY
LGRIEESMISLVDINILRKNGYEEIGKLINDFKSNKTRAINLLMNLVDFLTKIIKHIQHYIDPDCIIFHGYIGHQGLIDI
VKAKLQGDNLLCDIQKSLLNEEATLYGCIEETLSTLFNQYEMPIKIHNVDFYK

Sequences:

>Translated_373_residues
MAFNSKVSKELNKELILSCIRNEEFISKIEISKITGISLPSVSKIVDELVEEGKIIQSGIGDSSGGRKPVLYKFNKNFGY
FSTVIINKTDMSVYLMNLYGDIIAKDKISVNGADGNDLVFSIVSGITRILSSYNIFVDKLLNICIAAPGYFDYIENRFLI
KGIQSLKDVDLHEKLSKKFPNVKIKFASDIHMMALGEWSKVKNKAEKKRIVVINIDRDLRENACFAIVDNGNILKPGRGY
LGRIEESMISLVDINILRKNGYEEIGKLINDFKSNKTRAINLLMNLVDFLTKIIKHIQHYIDPDCIIFHGYIGHQGLIDI
VKAKLQGDNLLCDIQKSLLNEEATLYGCIEETLSTLFNQYEMPIKIHNVDFYK
>Mature_372_residues
AFNSKVSKELNKELILSCIRNEEFISKIEISKITGISLPSVSKIVDELVEEGKIIQSGIGDSSGGRKPVLYKFNKNFGYF
STVIINKTDMSVYLMNLYGDIIAKDKISVNGADGNDLVFSIVSGITRILSSYNIFVDKLLNICIAAPGYFDYIENRFLIK
GIQSLKDVDLHEKLSKKFPNVKIKFASDIHMMALGEWSKVKNKAEKKRIVVINIDRDLRENACFAIVDNGNILKPGRGYL
GRIEESMISLVDINILRKNGYEEIGKLINDFKSNKTRAINLLMNLVDFLTKIIKHIQHYIDPDCIIFHGYIGHQGLIDIV
KAKLQGDNLLCDIQKSLLNEEATLYGCIEETLSTLFNQYEMPIKIHNVDFYK

Specific function: Transcriptional repressor of xylose-utilizing enzymes [H]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR; PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 42234; Mature: 42103

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNSKVSKELNKELILSCIRNEEFISKIEISKITGISLPSVSKIVDELVEEGKIIQSGI
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEECCCC
GDSSGGRKPVLYKFNKNFGYFSTVIINKTDMSVYLMNLYGDIIAKDKISVNGADGNDLVF
CCCCCCCCCEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
SIVSGITRILSSYNIFVDKLLNICIAAPGYFDYIENRFLIKGIQSLKDVDLHEKLSKKFP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCC
NVKIKFASDIHMMALGEWSKVKNKAEKKRIVVINIDRDLRENACFAIVDNGNILKPGRGY
CEEEEEECCEEEEECCCHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCCEECCCCCH
LGRIEESMISLVDINILRKNGYEEIGKLINDFKSNKTRAINLLMNLVDFLTKIIKHIQHY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IDPDCIIFHGYIGHQGLIDIVKAKLQGDNLLCDIQKSLLNEEATLYGCIEETLSTLFNQY
CCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCC
EMPIKIHNVDFYK
CCCEEEECCCCCC
>Mature Secondary Structure 
AFNSKVSKELNKELILSCIRNEEFISKIEISKITGISLPSVSKIVDELVEEGKIIQSGI
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEECCCC
GDSSGGRKPVLYKFNKNFGYFSTVIINKTDMSVYLMNLYGDIIAKDKISVNGADGNDLVF
CCCCCCCCCEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
SIVSGITRILSSYNIFVDKLLNICIAAPGYFDYIENRFLIKGIQSLKDVDLHEKLSKKFP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCC
NVKIKFASDIHMMALGEWSKVKNKAEKKRIVVINIDRDLRENACFAIVDNGNILKPGRGY
CEEEEEECCEEEEECCCHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCCEECCCCCH
LGRIEESMISLVDINILRKNGYEEIGKLINDFKSNKTRAINLLMNLVDFLTKIIKHIQHY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IDPDCIIFHGYIGHQGLIDIVKAKLQGDNLLCDIQKSLLNEEATLYGCIEETLSTLFNQY
CCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCC
EMPIKIHNVDFYK
CCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]