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The map label for this gene is yurN [H]

Identifier: 167039059

GI number: 167039059

Start: 405395

End: 406318

Strand: Reverse

Name: yurN [H]

Synonym: Teth514_0396

Alternate gene names: 167039059

Gene position: 406318-405395 (Counterclockwise)

Preceding gene: 167039060

Following gene: 167039058

Centisome position: 16.54

GC content: 33.98

Gene sequence:

>924_bases
GTGGTAGAACAAAAAAATTTAACATCCCCAACTAAACAATCTAAGTTCCAACTAAGTGAAGCCACATTGGGATATATATT
AGTTGCTCCAGCCTTACTCTGTATTATTGCAATAGCTTTATATCCTGTACTCAATACTTTTAAATTAAGTCTTTATTACA
TGAAATTGCAGCTTCCTGGACTCACTCATTTTGTAGGACTTCAAAATTACATCACACTATCCTCTGATTCCAGATTTTGG
TCTGCAACCTTAAATACTGTATTTTTCACAGTTGTATCTGTAGCATTAGAATTAGTACTTGGAATGATAATGGCACTTTT
GATGAATAAAAAATTCAAAGGAATAGGATTGGTAAGAGCTGCCGTGTTGATTCCATGGGCAATACCGACTGTAATATCAG
CTCTTATGTGGAAATTCATTTATAATGATCAGTTTGGCGTATTAAATGACATCTTAATGAAAGTAGGTTTAATCAACAGT
TATAAGGCATGGCTAGGTAGTCCTTCTTCAGCAATGTCGGCAGCTATATTTGCAGATGTATGGAAAACTGCACCTTTCAT
GGCGTTATTATTGCTTGCTGGGCTTCAGAATATATCCCAAGACCTTTATGAAGCAGCAAAAGTAGATGGAGCAGGAAGCA
TAAGACAATTTTTTAGGATAACCTTACCATTGTTAAAACCTACAATTTTAGTTGCTCTCATATTTAGAACATTAGATGCT
TTTAGAGTATTTGACCTCATTTTCGTAATGACAGGAGGAGGACCTGGTAACTCAACAGAAACCCTTTCAATATATGCATA
TAAAACCCTTTTTAGAAACCTTGACTTTGGAATTGGTTCAGCAATAGCTGTTATAATATTCATCTTTGTTTTCATTTTTG
CAATGTTCTATATAAAGCTTTTAGATAAAAGCATTTTGAAATGA

Upstream 100 bases:

>100_bases
TAAAAACGAAGGTAAAAAGTAAATTTTTAAAGGTACTTCTTCATACAAATCCAAAGTGGCAGCTTTTTGCTGCCACTTAA
TATAAAAAAGAGGTGATAAC

Downstream 100 bases:

>100_bases
GGTGATATAAAAATGAAACTTAAAAATACCATAAACCAAATTATTTTCTATATTTTTTTAACAATATTCCTTGTATATAT
AATTTTCCCTTTTCTATGGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MVEQKNLTSPTKQSKFQLSEATLGYILVAPALLCIIAIALYPVLNTFKLSLYYMKLQLPGLTHFVGLQNYITLSSDSRFW
SATLNTVFFTVVSVALELVLGMIMALLMNKKFKGIGLVRAAVLIPWAIPTVISALMWKFIYNDQFGVLNDILMKVGLINS
YKAWLGSPSSAMSAAIFADVWKTAPFMALLLLAGLQNISQDLYEAAKVDGAGSIRQFFRITLPLLKPTILVALIFRTLDA
FRVFDLIFVMTGGGPGNSTETLSIYAYKTLFRNLDFGIGSAIAVIIFIFVFIFAMFYIKLLDKSILK

Sequences:

>Translated_307_residues
MVEQKNLTSPTKQSKFQLSEATLGYILVAPALLCIIAIALYPVLNTFKLSLYYMKLQLPGLTHFVGLQNYITLSSDSRFW
SATLNTVFFTVVSVALELVLGMIMALLMNKKFKGIGLVRAAVLIPWAIPTVISALMWKFIYNDQFGVLNDILMKVGLINS
YKAWLGSPSSAMSAAIFADVWKTAPFMALLLLAGLQNISQDLYEAAKVDGAGSIRQFFRITLPLLKPTILVALIFRTLDA
FRVFDLIFVMTGGGPGNSTETLSIYAYKTLFRNLDFGIGSAIAVIIFIFVFIFAMFYIKLLDKSILK
>Mature_307_residues
MVEQKNLTSPTKQSKFQLSEATLGYILVAPALLCIIAIALYPVLNTFKLSLYYMKLQLPGLTHFVGLQNYITLSSDSRFW
SATLNTVFFTVVSVALELVLGMIMALLMNKKFKGIGLVRAAVLIPWAIPTVISALMWKFIYNDQFGVLNDILMKVGLINS
YKAWLGSPSSAMSAAIFADVWKTAPFMALLLLAGLQNISQDLYEAAKVDGAGSIRQFFRITLPLLKPTILVALIFRTLDA
FRVFDLIFVMTGGGPGNSTETLSIYAYKTLFRNLDFGIGSAIAVIIFIFVFIFAMFYIKLLDKSILK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=254, Percent_Identity=29.9212598425197, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1790465, Length=261, Percent_Identity=32.5670498084291, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1789861, Length=288, Percent_Identity=29.5138888888889, Blast_Score=118, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34052; Mature: 34052

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEQKNLTSPTKQSKFQLSEATLGYILVAPALLCIIAIALYPVLNTFKLSLYYMKLQLPG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
LTHFVGLQNYITLSSDSRFWSATLNTVFFTVVSVALELVLGMIMALLMNKKFKGIGLVRA
HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AVLIPWAIPTVISALMWKFIYNDQFGVLNDILMKVGLINSYKAWLGSPSSAMSAAIFADV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
WKTAPFMALLLLAGLQNISQDLYEAAKVDGAGSIRQFFRITLPLLKPTILVALIFRTLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRVFDLIFVMTGGGPGNSTETLSIYAYKTLFRNLDFGIGSAIAVIIFIFVFIFAMFYIKL
HHHHHHHHHEECCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LDKSILK
HHHHHCC
>Mature Secondary Structure
MVEQKNLTSPTKQSKFQLSEATLGYILVAPALLCIIAIALYPVLNTFKLSLYYMKLQLPG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
LTHFVGLQNYITLSSDSRFWSATLNTVFFTVVSVALELVLGMIMALLMNKKFKGIGLVRA
HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AVLIPWAIPTVISALMWKFIYNDQFGVLNDILMKVGLINSYKAWLGSPSSAMSAAIFADV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
WKTAPFMALLLLAGLQNISQDLYEAAKVDGAGSIRQFFRITLPLLKPTILVALIFRTLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRVFDLIFVMTGGGPGNSTETLSIYAYKTLFRNLDFGIGSAIAVIIFIFVFIFAMFYIKL
HHHHHHHHHEECCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LDKSILK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]