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The map label for this gene is ycjP [H]

Identifier: 167039058

GI number: 167039058

Start: 404549

End: 405382

Strand: Reverse

Name: ycjP [H]

Synonym: Teth514_0395

Alternate gene names: 167039058

Gene position: 405382-404549 (Counterclockwise)

Preceding gene: 167039059

Following gene: 167039057

Centisome position: 16.5

GC content: 32.61

Gene sequence:

>834_bases
ATGAAACTTAAAAATACCATAAACCAAATTATTTTCTATATTTTTTTAACAATATTCCTTGTATATATAATTTTCCCTTT
TCTATGGCAAACACTTACCTCCTTTAAAACTCCACAAGAACTATTTAGTATTCCTCCAACATGGATTCCAAGTAAAATTT
ATACGGGATATTATATAAATGTATTTACTAAACGCCCTTTTTTAACCTATTTGAAAAATAGTTTTATTGTTGCTTCATCT
ACCACTCTTTTTAGTCTTTTTGTATCTTCTTTTGCAGCATATGCTTTAGCAAGGCTTAAATTTAAAGGAAAGGCGATAAT
ACTATCTTTAGTTTTGTCTGTATCAATGTTTCCTGGAATAGCTATTGTAAGCCCTCTGTTTATTTTTCTAAAAAATGTAA
ACCTATTAAATAGCTATCTAGGGCTTATATTAACATACACTACTTTTGCAATTCCTCTTTCTTTGTGGATTTTAACCTCA
TTTTTTAAAGAAATTCCTTTTGAACTTGAAGAATCTGCAAAAGTAGATGGTGCTACTCCTATGCAAGCATTTTTAAAGAT
AATAATGCCTCTTGCTACCCCAGGTATGTTTACAACTGCCATTCTCACGTTTATAGCTGCATGGAATGAATTCCTCTTCG
CCCTTGTATTTAACACACAAGACTCAATGAGAACAGTACCCGTCGGTATAGCTATGTTTCCTGGAGAACATGACCTTCCT
TGGGGAGATATTGCAGCAGCATCTGTTGTAGTAACTGTTCCTCTAATTATAATGGTACTTATCTTCCAAAAAAGGATAAT
CTCCGGTTTGACTGCTGGAGCAGTAAAAGGATAA

Upstream 100 bases:

>100_bases
TTCAGCAATAGCTGTTATAATATTCATCTTTGTTTTCATTTTTGCAATGTTCTATATAAAGCTTTTAGATAAAAGCATTT
TGAAATGAGGTGATATAAAA

Downstream 100 bases:

>100_bases
AAATTTTATGAAAGGAGTGTTTTAAATGCCATCAGTAAAAATTGGTATTATAGGTGCAGGAAGTGCTGTATTTTCTCTGA
GGTTGGTGAGCGATTTATGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKLKNTINQIIFYIFLTIFLVYIIFPFLWQTLTSFKTPQELFSIPPTWIPSKIYTGYYINVFTKRPFLTYLKNSFIVASS
TTLFSLFVSSFAAYALARLKFKGKAIILSLVLSVSMFPGIAIVSPLFIFLKNVNLLNSYLGLILTYTTFAIPLSLWILTS
FFKEIPFELEESAKVDGATPMQAFLKIIMPLATPGMFTTAILTFIAAWNEFLFALVFNTQDSMRTVPVGIAMFPGEHDLP
WGDIAAASVVVTVPLIIMVLIFQKRIISGLTAGAVKG

Sequences:

>Translated_277_residues
MKLKNTINQIIFYIFLTIFLVYIIFPFLWQTLTSFKTPQELFSIPPTWIPSKIYTGYYINVFTKRPFLTYLKNSFIVASS
TTLFSLFVSSFAAYALARLKFKGKAIILSLVLSVSMFPGIAIVSPLFIFLKNVNLLNSYLGLILTYTTFAIPLSLWILTS
FFKEIPFELEESAKVDGATPMQAFLKIIMPLATPGMFTTAILTFIAAWNEFLFALVFNTQDSMRTVPVGIAMFPGEHDLP
WGDIAAASVVVTVPLIIMVLIFQKRIISGLTAGAVKG
>Mature_277_residues
MKLKNTINQIIFYIFLTIFLVYIIFPFLWQTLTSFKTPQELFSIPPTWIPSKIYTGYYINVFTKRPFLTYLKNSFIVASS
TTLFSLFVSSFAAYALARLKFKGKAIILSLVLSVSMFPGIAIVSPLFIFLKNVNLLNSYLGLILTYTTFAIPLSLWILTS
FFKEIPFELEESAKVDGATPMQAFLKIIMPLATPGMFTTAILTFIAAWNEFLFALVFNTQDSMRTVPVGIAMFPGEHDLP
WGDIAAASVVVTVPLIIMVLIFQKRIISGLTAGAVKG

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=276, Percent_Identity=37.3188405797101, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1790464, Length=277, Percent_Identity=33.2129963898917, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1789860, Length=266, Percent_Identity=28.1954887218045, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31014; Mature: 31014

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKNTINQIIFYIFLTIFLVYIIFPFLWQTLTSFKTPQELFSIPPTWIPSKIYTGYYIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHCCEEEE
VFTKRPFLTYLKNSFIVASSTTLFSLFVSSFAAYALARLKFKGKAIILSLVLSVSMFPGI
EEECCHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCH
AIVSPLFIFLKNVNLLNSYLGLILTYTTFAIPLSLWILTSFFKEIPFELEESAKVDGATP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCH
MQAFLKIIMPLATPGMFTTAILTFIAAWNEFLFALVFNTQDSMRTVPVGIAMFPGEHDLP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECEEEEECCCCCCCC
WGDIAAASVVVTVPLIIMVLIFQKRIISGLTAGAVKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLKNTINQIIFYIFLTIFLVYIIFPFLWQTLTSFKTPQELFSIPPTWIPSKIYTGYYIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHCCEEEE
VFTKRPFLTYLKNSFIVASSTTLFSLFVSSFAAYALARLKFKGKAIILSLVLSVSMFPGI
EEECCHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCH
AIVSPLFIFLKNVNLLNSYLGLILTYTTFAIPLSLWILTSFFKEIPFELEESAKVDGATP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCH
MQAFLKIIMPLATPGMFTTAILTFIAAWNEFLFALVFNTQDSMRTVPVGIAMFPGEHDLP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECEEEEECCCCCCCC
WGDIAAASVVVTVPLIIMVLIFQKRIISGLTAGAVKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]