| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is aglA [H]
Identifier: 167039057
GI number: 167039057
Start: 403081
End: 404523
Strand: Reverse
Name: aglA [H]
Synonym: Teth514_0394
Alternate gene names: 167039057
Gene position: 404523-403081 (Counterclockwise)
Preceding gene: 167039058
Following gene: 167039051
Centisome position: 16.46
GC content: 35.48
Gene sequence:
>1443_bases ATGCCATCAGTAAAAATTGGTATTATAGGTGCAGGAAGTGCTGTATTTTCTCTGAGGTTGGTGAGCGATTTATGCAAAAC TCCAGCGTTATATGGAAGCTTAGTAACTCTCATGGATATCGATGAAGAAAGATTAGAGGCCGTGTACATACTTGCAAAAA GGTATGTGGAAGAAGTAGGAGCAGAGTTAAAGTTTGAAAAAACTAAAAATTTAGAAGATGCCATAATAGATGCAGATTTC GTAATAAATACAGCAATGGTAGGAGGACATACTTATCTAGAAAAAGTCAGACAGATTAGCGAAAAATATGGCTATTATAG AGGAATAGATGCACAGGAATTTAATATGGTTTCAGATTATTACACTTTCTCAAATTACAATCAGTTGAAATATTTCGTAG AAATTGCCAAGAAAATTGAAAAACTGTCTCCAAACGCCTGGTATTTACAAGCTGCTAATCCCGTATTTGAAGGCACAACT CTTGTAACAAGGACCTCTTCGATAAAAGCAGTTGGATTCTGCCATGGACATCTTGCATTAAAAGAAGTATTTGACACACT GGGACTTAAGCATAATAAAGTAGATTGGCAAGTAGCAGGAGTAAATCACGGAATATGGCTTAATAGATTTATATATGAAG GAAAAAGTGCTTACGAAAAGCTCAACACCTGGATAGAGGAAAATTCTCACAACTGGAAACCTCTTCATCCATTTAATGAC CAGCTATCCTCAGCTGCCATTGATATGTACAAGTTTCACGGAGTTTTGCCTGTTGGCGATACCGTAAGAAATGCTTCTTG GCGGTATCATAAAAACCTGGAAACAAAGAAAAAGTGGTATGGAGAACCTTGGTGTGGTGCAGACTCTGAAATAGGTTGGA AATGGTACCAAGAAACATTAGGAAAAATTACAGACATCACTAAAAAGATTGCAAAGTTCTTGATAGAAAATCCAAAAGCA AAGTTTAGCGATATAAAAGAAATTTTCGGTCAAGAGGCAAAAGACAATGAATTACTACAGGAAATGGAAAAAATACTAGA CCCAGAGCAAAAAAGTGAAGAACAGCACATTCCTTTCGTAGAATCGATTGTAACCGGCAAAAAAGAAAGATTTGTAGTAA ATATACCAAATAGAAGAATAATTCCTGCAGTAGAAAATGATGTTGTTGTAGAAGTACCTGCAATAGTAGATAGCGAAGGA ATACATCCAGAAAAAATAGAACCCATGCTCCCAGAGAGAGTAATAAAGTATTACCTAAAACCGAGAATTATGAGAATGGA AATGGCAGTAGAAGCATTTTTAACAGGGGACATAGACATAATAAAAGAACTTCTGTACAGAGACCCTAGAACTCAAAATG ATGGGCAGGTAGAAAAAGTTTTAGAAGAAATTCTATCCCTACCAGAAAATGAAGAGATGAAAAAACATTATTTAAAAAAA TAG
Upstream 100 bases:
>100_bases CCTCTAATTATAATGGTACTTATCTTCCAAAAAAGGATAATCTCCGGTTTGACTGCTGGAGCAGTAAAAGGATAAAAATT TTATGAAAGGAGTGTTTTAA
Downstream 100 bases:
>100_bases TGAGGCTAAATTTAACTAATGAGGTGCCATTTGTAAAATCCTTTGTACAAATGGCACCTTTTTTATTTTACTCTCTTTTT AGCACCTTCTTTTTTATTTC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Maltase [H]
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MPSVKIGIIGAGSAVFSLRLVSDLCKTPALYGSLVTLMDIDEERLEAVYILAKRYVEEVGAELKFEKTKNLEDAIIDADF VINTAMVGGHTYLEKVRQISEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVEIAKKIEKLSPNAWYLQAANPVFEGTT LVTRTSSIKAVGFCHGHLALKEVFDTLGLKHNKVDWQVAGVNHGIWLNRFIYEGKSAYEKLNTWIEENSHNWKPLHPFND QLSSAAIDMYKFHGVLPVGDTVRNASWRYHKNLETKKKWYGEPWCGADSEIGWKWYQETLGKITDITKKIAKFLIENPKA KFSDIKEIFGQEAKDNELLQEMEKILDPEQKSEEQHIPFVESIVTGKKERFVVNIPNRRIIPAVENDVVVEVPAIVDSEG IHPEKIEPMLPERVIKYYLKPRIMRMEMAVEAFLTGDIDIIKELLYRDPRTQNDGQVEKVLEEILSLPENEEMKKHYLKK
Sequences:
>Translated_480_residues MPSVKIGIIGAGSAVFSLRLVSDLCKTPALYGSLVTLMDIDEERLEAVYILAKRYVEEVGAELKFEKTKNLEDAIIDADF VINTAMVGGHTYLEKVRQISEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVEIAKKIEKLSPNAWYLQAANPVFEGTT LVTRTSSIKAVGFCHGHLALKEVFDTLGLKHNKVDWQVAGVNHGIWLNRFIYEGKSAYEKLNTWIEENSHNWKPLHPFND QLSSAAIDMYKFHGVLPVGDTVRNASWRYHKNLETKKKWYGEPWCGADSEIGWKWYQETLGKITDITKKIAKFLIENPKA KFSDIKEIFGQEAKDNELLQEMEKILDPEQKSEEQHIPFVESIVTGKKERFVVNIPNRRIIPAVENDVVVEVPAIVDSEG IHPEKIEPMLPERVIKYYLKPRIMRMEMAVEAFLTGDIDIIKELLYRDPRTQNDGQVEKVLEEILSLPENEEMKKHYLKK >Mature_479_residues PSVKIGIIGAGSAVFSLRLVSDLCKTPALYGSLVTLMDIDEERLEAVYILAKRYVEEVGAELKFEKTKNLEDAIIDADFV INTAMVGGHTYLEKVRQISEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVEIAKKIEKLSPNAWYLQAANPVFEGTTL VTRTSSIKAVGFCHGHLALKEVFDTLGLKHNKVDWQVAGVNHGIWLNRFIYEGKSAYEKLNTWIEENSHNWKPLHPFNDQ LSSAAIDMYKFHGVLPVGDTVRNASWRYHKNLETKKKWYGEPWCGADSEIGWKWYQETLGKITDITKKIAKFLIENPKAK FSDIKEIFGQEAKDNELLQEMEKILDPEQKSEEQHIPFVESIVTGKKERFVVNIPNRRIIPAVENDVVVEVPAIVDSEGI HPEKIEPMLPERVIKYYLKPRIMRMEMAVEAFLTGDIDIIKELLYRDPRTQNDGQVEKVLEEILSLPENEEMKKHYLKK
Specific function: Alpha-glycosidase with a very broad specificity. Hydrolyzes maltose and other small maltooligosaccharides but is inactive against the polymeric substrate starch. AglA is not specific with respect to the configuration at the C-4 position of its substrates
COG id: COG1486
COG function: function code G; Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 4 family [H]
Homologues:
Organism=Escherichia coli, GI1790560, Length=205, Percent_Identity=26.3414634146341, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788029, Length=223, Percent_Identity=26.9058295964126, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019802 - InterPro: IPR001088 - InterPro: IPR022616 - InterPro: IPR015955 - InterPro: IPR016040 [H]
Pfam domain/function: PF02056 Glyco_hydro_4; PF11975 Glyco_hydro_4C [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 55325; Mature: 55194
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS01324 GLYCOSYL_HYDROL_F4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVKIGIIGAGSAVFSLRLVSDLCKTPALYGSLVTLMDIDEERLEAVYILAKRYVEEVG CCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHC AELKFEKTKNLEDAIIDADFVINTAMVGGHTYLEKVRQISEKYGYYRGIDAQEFNMVSDY CCEEEHHHCCHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH YTFSNYNQLKYFVEIAKKIEKLSPNAWYLQAANPVFEGTTLVTRTSSIKAVGFCHGHLAL HHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEHHHHHH KEVFDTLGLKHNKVDWQVAGVNHGIWLNRFIYEGKSAYEKLNTWIEENSHNWKPLHPFND HHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHH QLSSAAIDMYKFHGVLPVGDTVRNASWRYHKNLETKKKWYGEPWCGADSEIGWKWYQETL HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHH GKITDITKKIAKFLIENPKAKFSDIKEIFGQEAKDNELLQEMEKILDPEQKSEEQHIPFV HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH ESIVTGKKERFVVNIPNRRIIPAVENDVVVEVPAIVDSEGIHPEKIEPMLPERVIKYYLK HHHHCCCCCEEEEECCCCEECCCCCCCEEEEECCEECCCCCCHHHCCCCCHHHHHHHHHC PRIMRMEMAVEAFLTGDIDIIKELLYRDPRTQNDGQVEKVLEEILSLPENEEMKKHYLKK HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure PSVKIGIIGAGSAVFSLRLVSDLCKTPALYGSLVTLMDIDEERLEAVYILAKRYVEEVG CCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHC AELKFEKTKNLEDAIIDADFVINTAMVGGHTYLEKVRQISEKYGYYRGIDAQEFNMVSDY CCEEEHHHCCHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH YTFSNYNQLKYFVEIAKKIEKLSPNAWYLQAANPVFEGTTLVTRTSSIKAVGFCHGHLAL HHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEHHHHHH KEVFDTLGLKHNKVDWQVAGVNHGIWLNRFIYEGKSAYEKLNTWIEENSHNWKPLHPFND HHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHH QLSSAAIDMYKFHGVLPVGDTVRNASWRYHKNLETKKKWYGEPWCGADSEIGWKWYQETL HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHH GKITDITKKIAKFLIENPKAKFSDIKEIFGQEAKDNELLQEMEKILDPEQKSEEQHIPFV HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH ESIVTGKKERFVVNIPNRRIIPAVENDVVVEVPAIVDSEGIHPEKIEPMLPERVIKYYLK HHHHCCCCCEEEEECCCCEECCCCCCCEEEEECCEECCCCCCHHHCCCCCHHHHHHHHHC PRIMRMEMAVEAFLTGDIDIIKELLYRDPRTQNDGQVEKVLEEILSLPENEEMKKHYLKK HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9453151; 10360571; 10972187; 12062450; 12588867 [H]