Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

Click here to switch to the map view.

The map label for this gene is 167038889

Identifier: 167038889

GI number: 167038889

Start: 229704

End: 230132

Strand: Reverse

Name: 167038889

Synonym: Teth514_0220

Alternate gene names: NA

Gene position: 230132-229704 (Counterclockwise)

Preceding gene: 167038898

Following gene: 167038884

Centisome position: 9.37

GC content: 36.6

Gene sequence:

>429_bases
ATGGGGTATAAAAGTGTACTAATTGAGAGAAAGTTCATGGGTAGATTTCCATACGGGAAAGACTTACTTGAAGAAATCAA
TAAACTGATTACAGAAGAAAACATACTCTCAGGAGAAATACGCATAATAGGTGCTGTGTCAAAAGCCATATTTGGCTACT
ATGATGCACAAAGCAAAAGCTACATCTACATATCAAAAGACGAGCACATGGAAATACTAAATGCCATAGGAAATATCTCA
GTAAAAGATGGCAAGCCCTTTGCCCATGTCCACATAACATTAGCAGATAAGAACGGAAACGCTTTTGGCGGCCATTTAAT
GGAAGGGACAATAATATTTGCTGCAGAATTCGTAATAACAGATTACGGTGACAATAAACTGGAAAGAGTTTACGATGAAA
CAACAGGACTTCAATTGTGGAATATTTAA

Upstream 100 bases:

>100_bases
ATGAACCAAAAAGGTATATATCCTCTGCAAATTCCACACTCAAGCAAGTTTATGATATAATTAATAATGTAAAAAATAAA
AGTTAAAAGGATGTGGTTTT

Downstream 100 bases:

>100_bases
GACCCAGTTTAATTGCTGGGTCTTTGATATTTTGTAAAATAATGTAAATACTTTATCACATCCAAATTAGTTTTATACAT
GATCCTTTTAATTATGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MGYKSVLIERKFMGRFPYGKDLLEEINKLITEENILSGEIRIIGAVSKAIFGYYDAQSKSYIYISKDEHMEILNAIGNIS
VKDGKPFAHVHITLADKNGNAFGGHLMEGTIIFAAEFVITDYGDNKLERVYDETTGLQLWNI

Sequences:

>Translated_142_residues
MGYKSVLIERKFMGRFPYGKDLLEEINKLITEENILSGEIRIIGAVSKAIFGYYDAQSKSYIYISKDEHMEILNAIGNIS
VKDGKPFAHVHITLADKNGNAFGGHLMEGTIIFAAEFVITDYGDNKLERVYDETTGLQLWNI
>Mature_141_residues
GYKSVLIERKFMGRFPYGKDLLEEINKLITEENILSGEIRIIGAVSKAIFGYYDAQSKSYIYISKDEHMEILNAIGNISV
KDGKPFAHVHITLADKNGNAFGGHLMEGTIIFAAEFVITDYGDNKLERVYDETTGLQLWNI

Specific function: Unknown

COG id: COG1661

COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16013; Mature: 15881

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYKSVLIERKFMGRFPYGKDLLEEINKLITEENILSGEIRIIGAVSKAIFGYYDAQSKS
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHEEECCCCCE
YIYISKDEHMEILNAIGNISVKDGKPFAHVHITLADKNGNAFGGHLMEGTIIFAAEFVIT
EEEEECCCHHHHHHHHCCEEEECCCCEEEEEEEEECCCCCCCCCEEECCEEEEEEEEEEE
DYGDNKLERVYDETTGLQLWNI
ECCCCHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
GYKSVLIERKFMGRFPYGKDLLEEINKLITEENILSGEIRIIGAVSKAIFGYYDAQSKS
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHEEECCCCCE
YIYISKDEHMEILNAIGNISVKDGKPFAHVHITLADKNGNAFGGHLMEGTIIFAAEFVIT
EEEEECCCHHHHHHHHCCEEEECCCCEEEEEEEEECCCCCCCCCEEECCEEEEEEEEEEE
DYGDNKLERVYDETTGLQLWNI
ECCCCHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA