| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is eda [H]
Identifier: 167038810
GI number: 167038810
Start: 134353
End: 134985
Strand: Direct
Name: eda [H]
Synonym: Teth514_0137
Alternate gene names: 167038810
Gene position: 134353-134985 (Clockwise)
Preceding gene: 167038809
Following gene: 167038811
Centisome position: 5.47
GC content: 32.86
Gene sequence:
>633_bases ATGGAAAAACAACAAATAATTGAAAAACTTAAACAACTTAAAATTACAGCTGTAATTAGAAATAGTGATATAAACACAAT GTTTTCTTTAGCTGATGCCTTAAAAAAAGGTGGTATTGAAGCATTAGAAATAACTGTTGAAGCGCCCGGTGCTATAGATG TAATCAAAGAATTAAGTAAAGCAAATAAATATTTTGTTGGTGCTGGAACAGTATTAGATGCGGAAACTGCGAGGGCTGCT ATTATAGCAGGTGCAAAATTTATATTTACACCGGTTATGAGACTTGATGTAATAAAATTATGTAATAGGTATGGTATACC TGTTATTCCTGGTGCTACTACTCCGACAGAAATTTTAACAGGTTATGAAGCAGGAGCGGATTTTATTAAAGTTTTTCCTG CAGGAGTTTTTGGACCTCAATATTTAAAAGAAATTTTAGGGCCACTCAAACATATACCCATTTTTGTGACGGGAGGAATT AATAAAAATAATATTAAAGATTTTATTTTAGCAGGTGCAACAGGCGTATCCTTAGGCGGAGCATTAGTAGATAAAGAACT TATTGCAAAAGGCATGTTTGACAAAATAACCGAAAAAGCTATTGAGTTTGTAAGGCTGGTAAATCAAGTTTAG
Upstream 100 bases:
>100_bases TGGCAGTGGAAGGACTTATCAGCGTATTAGAAGGCATGGAACCAAAATATCTTTATAAAAGGCAGAAATAAAATAATTTT AAAAAATAGGAGGTAGGAAG
Downstream 100 bases:
>100_bases TTTACATGAAAGGGCATTGATTCAGCAGCAGGTTTAGCCTTATCAGGACTTAAGGAACCATCATAAAATTTAATATGACA GACAATACGTAATTCATTAG
Product: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MEKQQIIEKLKQLKITAVIRNSDINTMFSLADALKKGGIEALEITVEAPGAIDVIKELSKANKYFVGAGTVLDAETARAA IIAGAKFIFTPVMRLDVIKLCNRYGIPVIPGATTPTEILTGYEAGADFIKVFPAGVFGPQYLKEILGPLKHIPIFVTGGI NKNNIKDFILAGATGVSLGGALVDKELIAKGMFDKITEKAIEFVRLVNQV
Sequences:
>Translated_210_residues MEKQQIIEKLKQLKITAVIRNSDINTMFSLADALKKGGIEALEITVEAPGAIDVIKELSKANKYFVGAGTVLDAETARAA IIAGAKFIFTPVMRLDVIKLCNRYGIPVIPGATTPTEILTGYEAGADFIKVFPAGVFGPQYLKEILGPLKHIPIFVTGGI NKNNIKDFILAGATGVSLGGALVDKELIAKGMFDKITEKAIEFVRLVNQV >Mature_210_residues MEKQQIIEKLKQLKITAVIRNSDINTMFSLADALKKGGIEALEITVEAPGAIDVIKELSKANKYFVGAGTVLDAETARAA IIAGAKFIFTPVMRLDVIKLCNRYGIPVIPGATTPTEILTGYEAGADFIKVFPAGVFGPQYLKEILGPLKHIPIFVTGGI NKNNIKDFILAGATGVSLGGALVDKELIAKGMFDKITEKAIEFVRLVNQV
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI48994954, Length=202, Percent_Identity=32.1782178217822, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1788156, Length=179, Percent_Identity=34.6368715083799, Blast_Score=90, Evalue=1e-19,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.3.16; =4.1.2.14 [H]
Molecular weight: Translated: 22545; Mature: 22545
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQQIIEKLKQLKITAVIRNSDINTMFSLADALKKGGIEALEITVEAPGAIDVIKELSK CCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHH ANKYFVGAGTVLDAETARAAIIAGAKFIFTPVMRLDVIKLCNRYGIPVIPGATTPTEILT CCCEEEECCCEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH GYEAGADFIKVFPAGVFGPQYLKEILGPLKHIPIFVTGGINKNNIKDFILAGATGVSLGG CHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCCHHHCH ALVDKELIAKGMFDKITEKAIEFVRLVNQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKQQIIEKLKQLKITAVIRNSDINTMFSLADALKKGGIEALEITVEAPGAIDVIKELSK CCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHH ANKYFVGAGTVLDAETARAAIIAGAKFIFTPVMRLDVIKLCNRYGIPVIPGATTPTEILT CCCEEEECCCEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH GYEAGADFIKVFPAGVFGPQYLKEILGPLKHIPIFVTGGINKNNIKDFILAGATGVSLGG CHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCCHHHCH ALVDKELIAKGMFDKITEKAIEFVRLVNQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]