| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is trxB [H]
Identifier: 167038722
GI number: 167038722
Start: 51995
End: 53218
Strand: Direct
Name: trxB [H]
Synonym: Teth514_0048
Alternate gene names: 167038722
Gene position: 51995-53218 (Clockwise)
Preceding gene: 167038721
Following gene: 167038723
Centisome position: 2.12
GC content: 36.36
Gene sequence:
>1224_bases ATGGAAAAGAAAAGAGAATATTATGATGTAGTAGTTATTGGCGGTGGACCTGCTGGAATGACAGCAGCTATATATTGTGG ACGTGCGAGACTTAAAACTCTTTTGATTGAAAAGTCTCTCGTTGGTGGCCTTGCCACATATACCAGTGAAATCGAGAATT ATCCGGGATTTCCTGAGGGAATTGGTGGACTTGAGTTGATGAAATTATTTGAGCAACAGACTAAAAGGTTTGGCGTGCAA ATAAAGCTTACAGATGTAAAAGGCTTGAGAATAGAAGAAGACTATAAAGTAGTTTCTACTTTCAGGGTTGATTATTATGC TAAGGCTGTTATTATTGCGACAGGAGGCAAACCAAGGCTTACTGGTGCTAAAGGGGAAGAGAACTTTTTATACGATAAAG GAATATCTTTTTGTGCTACCTGTGATGCGGCCTACTACACTGATAAAAAGGTTATGATAATTGGAAGCGGAGATGCAGCT ATAGAAGAAGGAATATTCTTGACCAAGTTTGCAAGAGAAGTTCATGTATCTGTTCTTCATGATGAAGGAATAATGGATGC CAATAAAGTAGCGCAAGAGAAGGCCTTGAAAAATGAAAAGATGATATTTCATTGGAATACAATGGTTGAAGCTTTTGAAG GGAATGAAAGGTTGGAAAGGGTTGTCCTTAAAAATTTAAAGACAGGAGAATTAATCCCAGTAGATGTAGATGGTTGTTTC CTGTTTATAGGTTATGTTCCTAATACGGAGATATTTAAAGGTCTAATAGACATGACACCTAAAGGTTATATCATAACAAA TGAAAATATGGAAACTAATATTGATGGAGTATACGCAGTAGGAGATGTGAGAGATAAATTCTTGAAGCAAGTTGCTACAG CAGTAGGAGATGGTGCAATAGCGGGTGTTATGGCAGAGAAGTATATTGAGGAAACGGATTACTTTACGAATGAAATTTTG AAGGCTAAAGAGACAGTGTTAGCATATGTCTACAATGCTGTAGAAGCAAAAGACAGAGAATATCTTATGAAGGTTGAGGA ATTTCATAAAAAATATGCTGATAAACTGAAAATGTGTAGGATAGATACTTATAAGTCTGACAGACTTGCTAAGAGGCTGT ACTGTGAAAAGGTACCCTGTATTGCTGTTTTAAAAGAAGGCAAGGTGGTAAAACACATTTATAACTTAGAGGATTTTGAA AAAGAATTGCTTAGCTGTATATAA
Upstream 100 bases:
>100_bases GGACTAATTGGAGCGTGGATTGGAAGCAAACTTTTAGTCAAATATTTTATGTAAATAATTAGGTGGCTTGTAGCCACCTA AATTTTAGGAGGGAGTTTGC
Downstream 100 bases:
>100_bases GAAAATGCCCTTTTGGGCATTTCAGCTTTGTTAACAAAGAACCAAAAATTATTTAAAGTAGATATTTTGCATCGTTGCTC CGAAGTTCCAAAGCGACAAA
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MEKKREYYDVVVIGGGPAGMTAAIYCGRARLKTLLIEKSLVGGLATYTSEIENYPGFPEGIGGLELMKLFEQQTKRFGVQ IKLTDVKGLRIEEDYKVVSTFRVDYYAKAVIIATGGKPRLTGAKGEENFLYDKGISFCATCDAAYYTDKKVMIIGSGDAA IEEGIFLTKFAREVHVSVLHDEGIMDANKVAQEKALKNEKMIFHWNTMVEAFEGNERLERVVLKNLKTGELIPVDVDGCF LFIGYVPNTEIFKGLIDMTPKGYIITNENMETNIDGVYAVGDVRDKFLKQVATAVGDGAIAGVMAEKYIEETDYFTNEIL KAKETVLAYVYNAVEAKDREYLMKVEEFHKKYADKLKMCRIDTYKSDRLAKRLYCEKVPCIAVLKEGKVVKHIYNLEDFE KELLSCI
Sequences:
>Translated_407_residues MEKKREYYDVVVIGGGPAGMTAAIYCGRARLKTLLIEKSLVGGLATYTSEIENYPGFPEGIGGLELMKLFEQQTKRFGVQ IKLTDVKGLRIEEDYKVVSTFRVDYYAKAVIIATGGKPRLTGAKGEENFLYDKGISFCATCDAAYYTDKKVMIIGSGDAA IEEGIFLTKFAREVHVSVLHDEGIMDANKVAQEKALKNEKMIFHWNTMVEAFEGNERLERVVLKNLKTGELIPVDVDGCF LFIGYVPNTEIFKGLIDMTPKGYIITNENMETNIDGVYAVGDVRDKFLKQVATAVGDGAIAGVMAEKYIEETDYFTNEIL KAKETVLAYVYNAVEAKDREYLMKVEEFHKKYADKLKMCRIDTYKSDRLAKRLYCEKVPCIAVLKEGKVVKHIYNLEDFE KELLSCI >Mature_407_residues MEKKREYYDVVVIGGGPAGMTAAIYCGRARLKTLLIEKSLVGGLATYTSEIENYPGFPEGIGGLELMKLFEQQTKRFGVQ IKLTDVKGLRIEEDYKVVSTFRVDYYAKAVIIATGGKPRLTGAKGEENFLYDKGISFCATCDAAYYTDKKVMIIGSGDAA IEEGIFLTKFAREVHVSVLHDEGIMDANKVAQEKALKNEKMIFHWNTMVEAFEGNERLERVVLKNLKTGELIPVDVDGCF LFIGYVPNTEIFKGLIDMTPKGYIITNENMETNIDGVYAVGDVRDKFLKQVATAVGDGAIAGVMAEKYIEETDYFTNEIL KAKETVLAYVYNAVEAKDREYLMKVEEFHKKYADKLKMCRIDTYKSDRLAKRLYCEKVPCIAVLKEGKVVKHIYNLEDFE KELLSCI
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=315, Percent_Identity=33.968253968254, Blast_Score=179, Evalue=3e-46, Organism=Escherichia coli, GI87081763, Length=317, Percent_Identity=29.9684542586751, Blast_Score=114, Evalue=9e-27, Organism=Saccharomyces cerevisiae, GI6320560, Length=316, Percent_Identity=37.3417721518987, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321898, Length=317, Percent_Identity=35.9621451104101, Blast_Score=187, Evalue=3e-48,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 45820; Mature: 45820
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKREYYDVVVIGGGPAGMTAAIYCGRARLKTLLIEKSLVGGLATYTSEIENYPGFPEG CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IGGLELMKLFEQQTKRFGVQIKLTDVKGLRIEEDYKVVSTFRVDYYAKAVIIATGGKPRL CCHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCCEEEHEEEEEEEEEEEEEEECCCCCC TGAKGEENFLYDKGISFCATCDAAYYTDKKVMIIGSGDAAIEEGIFLTKFAREVHVSVLH CCCCCCCCEEHHCCCCEEEECCCCEECCCEEEEEECCCHHHHCCCHHHHHHHHHEEEEEE DEGIMDANKVAQEKALKNEKMIFHWNTMVEAFEGNERLERVVLKNLKTGELIPVDVDGCF CCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCEE LFIGYVPNTEIFKGLIDMTPKGYIITNENMETNIDGVYAVGDVRDKFLKQVATAVGDGAI EEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHH AGVMAEKYIEETDYFTNEILKAKETVLAYVYNAVEAKDREYLMKVEEFHKKYADKLKMCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHE IDTYKSDRLAKRLYCEKVPCIAVLKEGKVVKHIYNLEDFEKELLSCI ECCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHCHHHHHHHHHHCC >Mature Secondary Structure MEKKREYYDVVVIGGGPAGMTAAIYCGRARLKTLLIEKSLVGGLATYTSEIENYPGFPEG CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IGGLELMKLFEQQTKRFGVQIKLTDVKGLRIEEDYKVVSTFRVDYYAKAVIIATGGKPRL CCHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCCEEEHEEEEEEEEEEEEEEECCCCCC TGAKGEENFLYDKGISFCATCDAAYYTDKKVMIIGSGDAAIEEGIFLTKFAREVHVSVLH CCCCCCCCEEHHCCCCEEEECCCCEECCCEEEEEECCCHHHHCCCHHHHHHHHHEEEEEE DEGIMDANKVAQEKALKNEKMIFHWNTMVEAFEGNERLERVVLKNLKTGELIPVDVDGCF CCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCEE LFIGYVPNTEIFKGLIDMTPKGYIITNENMETNIDGVYAVGDVRDKFLKQVATAVGDGAI EEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHH AGVMAEKYIEETDYFTNEILKAKETVLAYVYNAVEAKDREYLMKVEEFHKKYADKLKMCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHE IDTYKSDRLAKRLYCEKVPCIAVLKEGKVVKHIYNLEDFEKELLSCI ECCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8529640 [H]