Click here to switch to the map view.

The map label for this gene is yedE [H]

Identifier: 167038721

GI number: 167038721

Start: 51406

End: 51948

Strand: Direct

Name: yedE [H]

Synonym: Teth514_0047

Alternate gene names: 167038721

Gene position: 51406-51948 (Clockwise)

Preceding gene: 167038720

Following gene: 167038722

Centisome position: 2.09

GC content: 38.49

Gene sequence:

>543_bases
ATGAAGTCCCAGGAGCATCCCCTTTCTCCCCTTTTTAAGAAAATAATAAAGGATCCATGGAGTTATTGGATAGGAGCAGC
CCTTTTAGCCCTTTTAAATATAGCTTTATTTGCATTTTCTGGGCATCCATGGGGTGTTACTACGACTTTTTCCTACTGGG
GTGCTTGGATATTTAAAGCTTTAGGAGGACATCCAGAGACTTGGACTTATTTCCAAAATCCATCTCATGCAAAAGCACTC
ACTGAAAGTGTTTTCACAAACGCAGGTTCAGTTCAGAATATAGGGATTATTATAGGAGCTTTTTTGGCTACTCTTTTAGC
TTCGCAGTTTAAAATTAAAAAGATAAAATCTTATAGACAAGTTATTGCGGCCATACTTGGTGGCCTTTTAATGGGATACG
GTGCAAGAATAGCTTTTGGATGTAATGCTGGAGCTTATTTCAGTGGTATTCCTTCAATGTCTCTCTATGGTTGGGTGTGG
GCAGTATTTGGACTAATTGGAGCGTGGATTGGAAGCAAACTTTTAGTCAAATATTTTATGTAA

Upstream 100 bases:

>100_bases
TGGGCAAGAAACATGGGATACAATGTAGAAATTGAAGAAGTTGACGATGGCCAGTGGGAAGTTTATATTGAAAAAAATAA
ATAAATGGAGGTGAAAGTAA

Downstream 100 bases:

>100_bases
ATAATTAGGTGGCTTGTAGCCACCTAAATTTTAGGAGGGAGTTTGCATGGAAAAGAAAAGAGAATATTATGATGTAGTAG
TTATTGGCGGTGGACCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKSQEHPLSPLFKKIIKDPWSYWIGAALLALLNIALFAFSGHPWGVTTTFSYWGAWIFKALGGHPETWTYFQNPSHAKAL
TESVFTNAGSVQNIGIIIGAFLATLLASQFKIKKIKSYRQVIAAILGGLLMGYGARIAFGCNAGAYFSGIPSMSLYGWVW
AVFGLIGAWIGSKLLVKYFM

Sequences:

>Translated_180_residues
MKSQEHPLSPLFKKIIKDPWSYWIGAALLALLNIALFAFSGHPWGVTTTFSYWGAWIFKALGGHPETWTYFQNPSHAKAL
TESVFTNAGSVQNIGIIIGAFLATLLASQFKIKKIKSYRQVIAAILGGLLMGYGARIAFGCNAGAYFSGIPSMSLYGWVW
AVFGLIGAWIGSKLLVKYFM
>Mature_180_residues
MKSQEHPLSPLFKKIIKDPWSYWIGAALLALLNIALFAFSGHPWGVTTTFSYWGAWIFKALGGHPETWTYFQNPSHAKAL
TESVFTNAGSVQNIGIIIGAFLATLLASQFKIKKIKSYRQVIAAILGGLLMGYGARIAFGCNAGAYFSGIPSMSLYGWVW
AVFGLIGAWIGSKLLVKYFM

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=143, Percent_Identity=35.6643356643357, Blast_Score=77, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 19762; Mature: 19762

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQEHPLSPLFKKIIKDPWSYWIGAALLALLNIALFAFSGHPWGVTTTFSYWGAWIFKA
CCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LGGHPETWTYFQNPSHAKALTESVFTNAGSVQNIGIIIGAFLATLLASQFKIKKIKSYRQ
HCCCCCCCEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIAAILGGLLMGYGARIAFGCNAGAYFSGIPSMSLYGWVWAVFGLIGAWIGSKLLVKYFM
HHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSQEHPLSPLFKKIIKDPWSYWIGAALLALLNIALFAFSGHPWGVTTTFSYWGAWIFKA
CCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LGGHPETWTYFQNPSHAKALTESVFTNAGSVQNIGIIIGAFLATLLASQFKIKKIKSYRQ
HCCCCCCCEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIAAILGGLLMGYGARIAFGCNAGAYFSGIPSMSLYGWVWAVFGLIGAWIGSKLLVKYFM
HHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]