| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is leuA1 [H]
Identifier: 167038689
GI number: 167038689
Start: 16644
End: 17840
Strand: Direct
Name: leuA1 [H]
Synonym: Teth514_0014
Alternate gene names: 167038689
Gene position: 16644-17840 (Clockwise)
Preceding gene: 167038688
Following gene: 167038690
Centisome position: 0.68
GC content: 36.93
Gene sequence:
>1197_bases ATGGGGGTCAAAAGAGTCATTGTTTTTGACACTACGTTAAGGGATGGTGAGCAGACTCCTGGTGTGAATTTTAACAGCAA TGACAAGTTTGAAATAGCAAAGCAATTGGTAAATTTAGGGGTAGATGTCATAGAAGCTGGATTTCCCGCGGCTTCAAATG GAGATTTTGAAGCAGTCAAAAATATTGCTGACAAATTAAGAGGGGTTACTATTGCTGCAATGGCAAGGTCTGTAAAAGAG GATATAGACAGAGCTAGCAGCGCTTTGAAAAATGCTGAAAGGTCGAGATTACACGTTTTTATCGCAACTTCTGATATACA TCTTAAATACAAACTTAAGATGTCAAGAGAAGAAATGCTTGAAAAAGCCGTTGAAATGGTAAAATACGCAAAAGGAAAAT TTGATGAGATTCAATTTTCAGCAGAAGACGCTTCAAGGACTGATTGGGATTTCTTAGTAAAAGTTTTTAGTGAGGTAATT GATGCAGGAGCAAATGTAATAAATGTGCCCGATACTGTGGGATATGCGATGCCAAGAGAATTTGGAGAACTCATAAAATA CATCAGAAATAATGTTCCCAACATCGATGGAGTAATGATAAGTGCTCATTGTCACAATGATTTAGGAATGGCTGTAGCGA ATTCTTTGTCTGCCATAGAAAACGGAGCAACTCAAGTAGAAGTGACTGTAAATGGAATAGGAGAGAGGGCAGGAAATGCA GCCATGGAAGAAGTAGTAATGGCTTTAAATACTAGAAAGGATTATTTTGGCCTTGTTCACGGTATAAACACCAAAGAGAT ATACAATACAAGCAAATTGGTAAGCGAACTTACAGGAATTAAACTCCAACCTAATAAAGCAATTGTAGGTGCTAATGCTT TTAGACATCAAGCGGGAATTCACCAACATGGAGTTATAAACAACAGAGCTACTTATGAAATAATGAAACCAGAGGACATT GGAATAATTCCAGATACTTTTGCATTAGGTAAGCTTTCAGGAAGAAATGCTTTTGAATTGAAAGTCAGACAATTGGGGTA CAATAATCTTTCACCAGGAGAATTAAGTGATGCTTTTAGAAGGTTTAAAGATTTGGCAGACAGAAAAAAGGTCATTATAG ATGAGGATATAAGATTTGTGGTAGAGGAGACATTAGAAGAATTTAGAAGTTTTAAGGAGGGAGAAGCTTGGGCTTAA
Upstream 100 bases:
>100_bases AAAAGATAAAGAGGCAAATCATCTTATTGAAAAAGTCGGCAAAGGTTTGAGAGAAATGATGGCTTGGATTAAAAAAGAAT GAATAAGGAGGTAGAAGACA
Downstream 100 bases:
>100_bases CATTGACACAAAAGATATTGTCAGCAAAAATTGGTAGAGAGGTCAAAGCAGGAGAGTTAATAGAAGTAGATGTAGATATG GTGTTGGGCAATGACGTCAC
Product: pyruvate carboxyltransferase
Products: NA
Alternate protein names: Alpha-IPM synthase 1; Alpha-isopropylmalate synthase 1 [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MGVKRVIVFDTTLRDGEQTPGVNFNSNDKFEIAKQLVNLGVDVIEAGFPAASNGDFEAVKNIADKLRGVTIAAMARSVKE DIDRASSALKNAERSRLHVFIATSDIHLKYKLKMSREEMLEKAVEMVKYAKGKFDEIQFSAEDASRTDWDFLVKVFSEVI DAGANVINVPDTVGYAMPREFGELIKYIRNNVPNIDGVMISAHCHNDLGMAVANSLSAIENGATQVEVTVNGIGERAGNA AMEEVVMALNTRKDYFGLVHGINTKEIYNTSKLVSELTGIKLQPNKAIVGANAFRHQAGIHQHGVINNRATYEIMKPEDI GIIPDTFALGKLSGRNAFELKVRQLGYNNLSPGELSDAFRRFKDLADRKKVIIDEDIRFVVEETLEEFRSFKEGEAWA
Sequences:
>Translated_398_residues MGVKRVIVFDTTLRDGEQTPGVNFNSNDKFEIAKQLVNLGVDVIEAGFPAASNGDFEAVKNIADKLRGVTIAAMARSVKE DIDRASSALKNAERSRLHVFIATSDIHLKYKLKMSREEMLEKAVEMVKYAKGKFDEIQFSAEDASRTDWDFLVKVFSEVI DAGANVINVPDTVGYAMPREFGELIKYIRNNVPNIDGVMISAHCHNDLGMAVANSLSAIENGATQVEVTVNGIGERAGNA AMEEVVMALNTRKDYFGLVHGINTKEIYNTSKLVSELTGIKLQPNKAIVGANAFRHQAGIHQHGVINNRATYEIMKPEDI GIIPDTFALGKLSGRNAFELKVRQLGYNNLSPGELSDAFRRFKDLADRKKVIIDEDIRFVVEETLEEFRSFKEGEAWA >Mature_397_residues GVKRVIVFDTTLRDGEQTPGVNFNSNDKFEIAKQLVNLGVDVIEAGFPAASNGDFEAVKNIADKLRGVTIAAMARSVKED IDRASSALKNAERSRLHVFIATSDIHLKYKLKMSREEMLEKAVEMVKYAKGKFDEIQFSAEDASRTDWDFLVKVFSEVID AGANVINVPDTVGYAMPREFGELIKYIRNNVPNIDGVMISAHCHNDLGMAVANSLSAIENGATQVEVTVNGIGERAGNAA MEEVVMALNTRKDYFGLVHGINTKEIYNTSKLVSELTGIKLQPNKAIVGANAFRHQAGIHQHGVINNRATYEIMKPEDIG IIPDTFALGKLSGRNAFELKVRQLGYNNLSPGELSDAFRRFKDLADRKKVIIDEDIRFVVEETLEEFRSFKEGEAWA
Specific function: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786261, Length=391, Percent_Identity=46.5473145780051, Blast_Score=355, Evalue=4e-99, Organism=Saccharomyces cerevisiae, GI6320071, Length=395, Percent_Identity=31.8987341772152, Blast_Score=173, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6320019, Length=376, Percent_Identity=32.4468085106383, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6324682, Length=348, Percent_Identity=31.3218390804598, Blast_Score=136, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6324225, Length=348, Percent_Identity=30.4597701149425, Blast_Score=127, Evalue=3e-30,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002034 - InterPro: IPR013785 - InterPro: IPR000891 [H]
Pfam domain/function: PF00682 HMGL-like [H]
EC number: =2.3.3.13 [H]
Molecular weight: Translated: 44090; Mature: 43958
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00815 AIPM_HOMOCIT_SYNTH_1 ; PS00816 AIPM_HOMOCIT_SYNTH_2 ; PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVKRVIVFDTTLRDGEQTPGVNFNSNDKFEIAKQLVNLGVDVIEAGFPAASNGDFEAVK CCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHH NIADKLRGVTIAAMARSVKEDIDRASSALKNAERSRLHVFIATSDIHLKYKLKMSREEML HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEECCCHHHHH EKAVEMVKYAKGKFDEIQFSAEDASRTDWDFLVKVFSEVIDAGANVINVPDTVGYAMPRE HHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHCHHH FGELIKYIRNNVPNIDGVMISAHCHNDLGMAVANSLSAIENGATQVEVTVNGIGERAGNA HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHH AMEEVVMALNTRKDYFGLVHGINTKEIYNTSKLVSELTGIKLQPNKAIVGANAFRHQAGI HHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCEECCCCEEECCHHHHHHCCC HQHGVINNRATYEIMKPEDIGIIPDTFALGKLSGRNAFELKVRQLGYNNLSPGELSDAFR CCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCEEEEHHHCCCCCCCCHHHHHHHH RFKDLADRKKVIIDEDIRFVVEETLEEFRSFKEGEAWA HHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GVKRVIVFDTTLRDGEQTPGVNFNSNDKFEIAKQLVNLGVDVIEAGFPAASNGDFEAVK CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHH NIADKLRGVTIAAMARSVKEDIDRASSALKNAERSRLHVFIATSDIHLKYKLKMSREEML HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEECCCHHHHH EKAVEMVKYAKGKFDEIQFSAEDASRTDWDFLVKVFSEVIDAGANVINVPDTVGYAMPRE HHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHCHHH FGELIKYIRNNVPNIDGVMISAHCHNDLGMAVANSLSAIENGATQVEVTVNGIGERAGNA HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHH AMEEVVMALNTRKDYFGLVHGINTKEIYNTSKLVSELTGIKLQPNKAIVGANAFRHQAGI HHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCEECCCCEEECCHHHHHHCCC HQHGVINNRATYEIMKPEDIGIIPDTFALGKLSGRNAFELKVRQLGYNNLSPGELSDAFR CCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCEEEEHHHCCCCCCCCHHHHHHHH RFKDLADRKKVIIDEDIRFVVEETLEEFRSFKEGEAWA HHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]