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The map label for this gene is dadA [H]

Identifier: 163845369

GI number: 163845369

Start: 1230675

End: 1231937

Strand: Reverse

Name: dadA [H]

Synonym: BSUIS_B1269

Alternate gene names: 163845369

Gene position: 1231937-1230675 (Counterclockwise)

Preceding gene: 163845372

Following gene: 163845368

Centisome position: 87.94

GC content: 60.41

Gene sequence:

>1263_bases
ATGAAATCTGATCCACAGGGTCAGCAGGATATCGTCATCATTGGCGGGGGGATCGTCGGTGTCGCCACCGCCGCATTGCT
CGCCGAGGCCGGGCGCGAGGTGCTCGTTATTGACCGGACAGGCATTTGCGAGGAAACGACTTCCGGCAATGCGGCAGCGC
TGGCCTTTTCCGATATTCTGCCGCTTGCCTCGAAAGGCGTGATGCGCAAGGTGCCGGGCTGGCTTCTGGACCCGCTTGGC
CCTTTCACCATTCGCCCCACCTATTTCCCCAAAATGCTTCCCTGGCTCTATCGTTTCTGGCGGGCCAGCGCGCCCAATGC
CTTGGCCAGAACGGCCATTGCGCAAGCGGCCATCATGCGCCTTGCGGAAAACGAGATGCAGTCGCTGATCGAGCGTGCGG
GCTTGCGCAACAGGCTGCGTGAAGACGGCAATCTGGAGCTTTACGAAAGCGAGGCGGAGCTTGCGGCCTCGCAGCCCGGC
TGGGATGTGCGCGAAAAGGCGGGCATCGCCTATGAACATGTGCGCGGCAGGCGGCTTGCGGAATTGCAGCCGGGGCTGAA
CCCGCGCTTCGTGGCTGGAACTTTCGTGCCTGGCTGGAAGAATGTGAGCGATCCGAAGCTTTTCGGCAAGGCGATCTGGT
CCTATGCGGAAAGTCTTGGCGCACGGTTCCTTTCCGGCAAGGTTGCGAGCGCCAAGCGCCAGAATGGCGGCGTTCGTCTG
CGGCTTGAAAACGGGGTGGAGATCAATGCCACTCATCTGGTGCTGATGGCGGGTGCGTGGTCGCGGGATCTGGCAAAGGG
CTTCGGCGATATCGTGCCGCTCGATACCGAACGCGGTTACAATACGACGCTTCCGGTCGGCAGCTTTGATGTAAAGCGCC
AGCTAACGTTTCCCGGCCATGGCTTTGTCATTACGCCAATGGAGACCGGCCTTCGTGTTGGCGGAGCGGTGGAGTTCGGT
GGGCTGGATCTGCCGCCCAATTTTGCACGCTCCGAAGCGATGCTGAAGAAAGCATCGAAGTTTTTGCCGGGCCTTAAGGT
TGAAGGCGGCAGGCAATGGATGGGGTATCGGCCCTCCATGCCGGATTCCCTTCCGGTTATCGGCCGCGCTTCGGCGGGTG
GCAATGTTTATTACGGTTTCGGCCATGGGCATCTGGGCCTTACGCAATCGGCGGCGACGGTGCGGCTTATCCGCGACCTC
ATCACGGGTAGCGAACCTGCAATCGATATCGAACCTTTCAAGCCTCAACGTTTTCGGAACTGA

Upstream 100 bases:

>100_bases
CGATAGACATTCCACACGGGGCTCGCGATGAAAGACGTGTCGATGCCGGAGGAGCTGGACATTTCGCAATATGCCAAGAC
GGTCGGGGAGCCGCACAGAA

Downstream 100 bases:

>100_bases
CCATAATGGCAAGACATTCCTTCTTCTGCGTCGATGGGCATACATGCGGCAACCCTGTGCGGCTGGTGGCTGGCGGCGGG
CCGAACCTCAATGGATCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKSDPQGQQDIVIIGGGIVGVATAALLAEAGREVLVIDRTGICEETTSGNAAALAFSDILPLASKGVMRKVPGWLLDPLG
PFTIRPTYFPKMLPWLYRFWRASAPNALARTAIAQAAIMRLAENEMQSLIERAGLRNRLREDGNLELYESEAELAASQPG
WDVREKAGIAYEHVRGRRLAELQPGLNPRFVAGTFVPGWKNVSDPKLFGKAIWSYAESLGARFLSGKVASAKRQNGGVRL
RLENGVEINATHLVLMAGAWSRDLAKGFGDIVPLDTERGYNTTLPVGSFDVKRQLTFPGHGFVITPMETGLRVGGAVEFG
GLDLPPNFARSEAMLKKASKFLPGLKVEGGRQWMGYRPSMPDSLPVIGRASAGGNVYYGFGHGHLGLTQSAATVRLIRDL
ITGSEPAIDIEPFKPQRFRN

Sequences:

>Translated_420_residues
MKSDPQGQQDIVIIGGGIVGVATAALLAEAGREVLVIDRTGICEETTSGNAAALAFSDILPLASKGVMRKVPGWLLDPLG
PFTIRPTYFPKMLPWLYRFWRASAPNALARTAIAQAAIMRLAENEMQSLIERAGLRNRLREDGNLELYESEAELAASQPG
WDVREKAGIAYEHVRGRRLAELQPGLNPRFVAGTFVPGWKNVSDPKLFGKAIWSYAESLGARFLSGKVASAKRQNGGVRL
RLENGVEINATHLVLMAGAWSRDLAKGFGDIVPLDTERGYNTTLPVGSFDVKRQLTFPGHGFVITPMETGLRVGGAVEFG
GLDLPPNFARSEAMLKKASKFLPGLKVEGGRQWMGYRPSMPDSLPVIGRASAGGNVYYGFGHGHLGLTQSAATVRLIRDL
ITGSEPAIDIEPFKPQRFRN
>Mature_420_residues
MKSDPQGQQDIVIIGGGIVGVATAALLAEAGREVLVIDRTGICEETTSGNAAALAFSDILPLASKGVMRKVPGWLLDPLG
PFTIRPTYFPKMLPWLYRFWRASAPNALARTAIAQAAIMRLAENEMQSLIERAGLRNRLREDGNLELYESEAELAASQPG
WDVREKAGIAYEHVRGRRLAELQPGLNPRFVAGTFVPGWKNVSDPKLFGKAIWSYAESLGARFLSGKVASAKRQNGGVRL
RLENGVEINATHLVLMAGAWSRDLAKGFGDIVPLDTERGYNTTLPVGSFDVKRQLTFPGHGFVITPMETGLRVGGAVEFG
GLDLPPNFARSEAMLKKASKFLPGLKVEGGRQWMGYRPSMPDSLPVIGRASAGGNVYYGFGHGHLGLTQSAATVRLIRDL
ITGSEPAIDIEPFKPQRFRN

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=419, Percent_Identity=29.3556085918854, Blast_Score=151, Evalue=6e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45549; Mature: 45549

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDPQGQQDIVIIGGGIVGVATAALLAEAGREVLVIDRTGICEETTSGNAAALAFSDIL
CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEHHHHHH
PLASKGVMRKVPGWLLDPLGPFTIRPTYFPKMLPWLYRFWRASAPNALARTAIAQAAIMR
HHHHCCHHHHCCCHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LAENEMQSLIERAGLRNRLREDGNLELYESEAELAASQPGWDVREKAGIAYEHVRGRRLA
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCHHHHCCCHHHHHCCCCHH
ELQPGLNPRFVAGTFVPGWKNVSDPKLFGKAIWSYAESLGARFLSGKVASAKRQNGGVRL
HCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEE
RLENGVEINATHLVLMAGAWSRDLAKGFGDIVPLDTERGYNTTLPVGSFDVKRQLTFPGH
EECCCCEECCEEEEEEECCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCC
GFVITPMETGLRVGGAVEFGGLDLPPNFARSEAMLKKASKFLPGLKVEGGRQWMGYRPSM
CEEEEEHHHCCEECCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCC
PDSLPVIGRASAGGNVYYGFGHGHLGLTQSAATVRLIRDLITGSEPAIDIEPFKPQRFRN
CCCCCCEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHCCC
>Mature Secondary Structure
MKSDPQGQQDIVIIGGGIVGVATAALLAEAGREVLVIDRTGICEETTSGNAAALAFSDIL
CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEHHHHHH
PLASKGVMRKVPGWLLDPLGPFTIRPTYFPKMLPWLYRFWRASAPNALARTAIAQAAIMR
HHHHCCHHHHCCCHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LAENEMQSLIERAGLRNRLREDGNLELYESEAELAASQPGWDVREKAGIAYEHVRGRRLA
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCHHHHCCCHHHHHCCCCHH
ELQPGLNPRFVAGTFVPGWKNVSDPKLFGKAIWSYAESLGARFLSGKVASAKRQNGGVRL
HCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEE
RLENGVEINATHLVLMAGAWSRDLAKGFGDIVPLDTERGYNTTLPVGSFDVKRQLTFPGH
EECCCCEECCEEEEEEECCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCC
GFVITPMETGLRVGGAVEFGGLDLPPNFARSEAMLKKASKFLPGLKVEGGRQWMGYRPSM
CEEEEEHHHCCEECCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCC
PDSLPVIGRASAGGNVYYGFGHGHLGLTQSAATVRLIRDLITGSEPAIDIEPFKPQRFRN
CCCCCCEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA