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The map label for this gene is rocF [H]

Identifier: 163845018

GI number: 163845018

Start: 868354

End: 869274

Strand: Reverse

Name: rocF [H]

Synonym: BSUIS_B0893

Alternate gene names: 163845018

Gene position: 869274-868354 (Counterclockwise)

Preceding gene: 163845020

Following gene: 163845017

Centisome position: 62.05

GC content: 59.61

Gene sequence:

>921_bases
ATGCATTGTAAGATTCTGGGGCTGCCCGTTCAGGAAGGCACTGGCCGCAAGGGCTGTAATATGGGGCCTGATTCCTATCG
TGCGGCCGGGATTGCCGATGCCATAAGGGAACTTGGGCACGAGTGCACAGATTTGGGCAATCTGGCGCCTGCCGCCCAGC
GCCCGCTACAGCATCCGAACCATGCAATCAAGGCGCTTCCATATGCCGTTGCCTGGATCGAAGCGATCAGCGAAGCGGCC
TATCGCGAAAGTGCGGAAGGGTTCCCGATCTTTCTTGGTGGCGATCACCTTCTGGCAGCGGGCACGGTTCCCGGTATTGC
GCGCCGCGCCGCTGAAAAGGGGCGCAAGCAATTCGTGCTCTGGCTCGATGCGCATACGGATTTCCATACGCTGGAAACCA
CGACCAGCGGCAATCTTCATGGTACGCCCGTTGCTTATTATACCGGTCAGAAGGGCTTTGAGGGCTATTTCCCCAAGCTT
GCAGCGCCGATCGATCCGCATAATGTCTGCATGTTGGGCATTCGCAGCGTCGATCCGGCTGAGCGGGAAGCGGTCAAGAA
AACAGAAGTTATCGTCTATGACATGCGGCTGATCGACGAGCATGGTGTTGCCGTCCTGCTGCGCCGGTTTCTGGAGCGCG
TGAAGGCGGAAGACGGGCTGTTGCATGTGAGCCTTGATGTCGATTTTCTCGATCCCTCCATCGCGCCGGCCGTGGGTACG
ACGGTGCCTGGCGGCGCGACCTTCCGTGAGGCGCATCTCATCATGGAGATGCTGCACGACAGCGGGCTGGTGACGAGCCT
CGATCTCGTTGAACTCAATCCCTTTCTTGATGAGCGCGGCAGCACGGCCGCCGTCATGGTGGACCTGATGGCGAGCCTTC
TGGGCCGCAGCGTCATGGACCGCCCGACCATCAGCTATTGA

Upstream 100 bases:

>100_bases
ATTCTGATAAACCAAACCGAGAAAATTGCCAATCCGGTTGGTTCACATCGCCAAGCATAAATGGTCAATTTTGATACAGA
TATTAGAAGGAATCCAATTT

Downstream 100 bases:

>100_bases
CGTGGCCCATGTGGCTGCCAAATGCTCAAGGAGCAATGATGACCCAACCGAACCTCAATATCGTTCCTTTCGTCAGCGTC
GATCATATGATGAAGCTGGT

Product: arginase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MHCKILGLPVQEGTGRKGCNMGPDSYRAAGIADAIRELGHECTDLGNLAPAAQRPLQHPNHAIKALPYAVAWIEAISEAA
YRESAEGFPIFLGGDHLLAAGTVPGIARRAAEKGRKQFVLWLDAHTDFHTLETTTSGNLHGTPVAYYTGQKGFEGYFPKL
AAPIDPHNVCMLGIRSVDPAEREAVKKTEVIVYDMRLIDEHGVAVLLRRFLERVKAEDGLLHVSLDVDFLDPSIAPAVGT
TVPGGATFREAHLIMEMLHDSGLVTSLDLVELNPFLDERGSTAAVMVDLMASLLGRSVMDRPTISY

Sequences:

>Translated_306_residues
MHCKILGLPVQEGTGRKGCNMGPDSYRAAGIADAIRELGHECTDLGNLAPAAQRPLQHPNHAIKALPYAVAWIEAISEAA
YRESAEGFPIFLGGDHLLAAGTVPGIARRAAEKGRKQFVLWLDAHTDFHTLETTTSGNLHGTPVAYYTGQKGFEGYFPKL
AAPIDPHNVCMLGIRSVDPAEREAVKKTEVIVYDMRLIDEHGVAVLLRRFLERVKAEDGLLHVSLDVDFLDPSIAPAVGT
TVPGGATFREAHLIMEMLHDSGLVTSLDLVELNPFLDERGSTAAVMVDLMASLLGRSVMDRPTISY
>Mature_306_residues
MHCKILGLPVQEGTGRKGCNMGPDSYRAAGIADAIRELGHECTDLGNLAPAAQRPLQHPNHAIKALPYAVAWIEAISEAA
YRESAEGFPIFLGGDHLLAAGTVPGIARRAAEKGRKQFVLWLDAHTDFHTLETTTSGNLHGTPVAYYTGQKGFEGYFPKL
AAPIDPHNVCMLGIRSVDPAEREAVKKTEVIVYDMRLIDEHGVAVLLRRFLERVKAEDGLLHVSLDVDFLDPSIAPAVGT
TVPGGATFREAHLIMEMLHDSGLVTSLDLVELNPFLDERGSTAAVMVDLMASLLGRSVMDRPTISY

Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family [H]

Homologues:

Organism=Homo sapiens, GI4502215, Length=307, Percent_Identity=35.5048859934853, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI10947139, Length=313, Percent_Identity=33.8658146964856, Blast_Score=151, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI71996843, Length=226, Percent_Identity=30.5309734513274, Blast_Score=92, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6325146, Length=199, Percent_Identity=36.1809045226131, Blast_Score=130, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24638886, Length=308, Percent_Identity=30.5194805194805, Blast_Score=128, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014033
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.1 [H]

Molecular weight: Translated: 33141; Mature: 33141

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00147 ARGINASE_1 ; PS00148 ARGINASE_2 ; PS01053 ARGINASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCKILGLPVQEGTGRKGCNMGPDSYRAAGIADAIRELGHECTDLGNLAPAAQRPLQHPN
CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
HAIKALPYAVAWIEAISEAAYRESAEGFPIFLGGDHLLAAGTVPGIARRAAEKGRKQFVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHCCCEEEEE
WLDAHTDFHTLETTTSGNLHGTPVAYYTGQKGFEGYFPKLAAPIDPHNVCMLGIRSVDPA
EEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHH
EREAVKKTEVIVYDMRLIDEHGVAVLLRRFLERVKAEDGLLHVSLDVDFLDPSIAPAVGT
HHHHHHHHHEEEEEEEHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCC
TVPGGATFREAHLIMEMLHDSGLVTSLDLVELNPFLDERGSTAAVMVDLMASLLGRSVMD
CCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHC
RPTISY
CCCCCC
>Mature Secondary Structure
MHCKILGLPVQEGTGRKGCNMGPDSYRAAGIADAIRELGHECTDLGNLAPAAQRPLQHPN
CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
HAIKALPYAVAWIEAISEAAYRESAEGFPIFLGGDHLLAAGTVPGIARRAAEKGRKQFVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHCCCEEEEE
WLDAHTDFHTLETTTSGNLHGTPVAYYTGQKGFEGYFPKLAAPIDPHNVCMLGIRSVDPA
EEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHH
EREAVKKTEVIVYDMRLIDEHGVAVLLRRFLERVKAEDGLLHVSLDVDFLDPSIAPAVGT
HHHHHHHHHEEEEEEEHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCC
TVPGGATFREAHLIMEMLHDSGLVTSLDLVELNPFLDERGSTAAVMVDLMASLLGRSVMD
CCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHC
RPTISY
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9375792 [H]