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The map label for this gene is arcB [H]

Identifier: 163845017

GI number: 163845017

Start: 867239

End: 868315

Strand: Reverse

Name: arcB [H]

Synonym: BSUIS_B0892

Alternate gene names: 163845017

Gene position: 868315-867239 (Counterclockwise)

Preceding gene: 163845018

Following gene: 163845014

Centisome position: 61.99

GC content: 56.92

Gene sequence:

>1077_bases
ATGACCCAACCGAACCTCAATATCGTTCCTTTCGTCAGCGTCGATCATATGATGAAGCTGGTGCTTCGCGTCGGCGTTGA
GACCTTTCTTAAGGAACTTGCCGGTTATGTGGAGGAAGATTTCCGTCGCTGGCAAAATTTTGACAAGACGCCGCGCGTGG
CCTCGCATTCCAAGGAAGGCGTGATCGAGCTGATGCCGACGAGCGACGGCACGCTCTATGGCTTCAAATATGTGAACGGC
CATCCGAAGAACACTCGTGATGGTCTCCAGACCGTTACGGCATTCGGCGTGCTGGCTGATGTGGGCAGCGGTTATCCGAT
GCTGCTGACCGAAATGACCATTTTGACCGCGCTGCGCACGGCTGCAACTTCTGCCGTCGCGGCGAAGCATCTTGCGCCGA
AGAATGCCCGCACCATGGCGATTATCGGCAATGGCGCGCAGAGCGAGTTTCAGGCGCTGGCCTTCAAGGCGATCCTGGGC
GTGGACAAGTTGCGCCTTTATGACCTCGACCCGCAAGCGACTGCCAAATGCATCCGAAACCTGCAAGGGGCCGGTTTCGA
CATTGTTGCCTGCAAGAGCGTGGAGGAAGCGGTCGAAGGGGCAGATATCATCACCACCGTCACAGCCGACAAGGCCAATG
CGACGATCCTGACCGACAACATGGTCGGCGCTGGGATGCATATCAATGCGGTTGGCGGTGATTGCCCCGGCAAGACAGAA
TTGCACGGCGATATCCTTCGCCGTTCGGATATTTTCGTGGAATATCCGCCGCAGACCCGCATCGAAGGTGAAATCCAGCA
ATTGCCGGAAGATTATCCGGTCAATGAGCTATGGGAAGTCATTACCGGCAGGATCGCTGGCCGCAAGGATGCCCGCCAGA
TCACGCTGTTCGACTCGGTCGGCTTTGCGACAGAAGATTTCTCGGCGTTGCGCTATGTGCGTGACAAGCTGAAGGATACG
GGACTTTACGAACAGTTGGACCTGCTGGCCGATCCTGACGAGCCGCGCGATCTCTATGGCATGTTGCTGCGCCATGAGAA
GCTGCTTCAGTCTGAAAGCACCAAGCCTGCCGCCTGA

Upstream 100 bases:

>100_bases
TGGACCTGATGGCGAGCCTTCTGGGCCGCAGCGTCATGGACCGCCCGACCATCAGCTATTGACGTGGCCCATGTGGCTGC
CAAATGCTCAAGGAGCAATG

Downstream 100 bases:

>100_bases
CCAAGGCAGGTTTTAGCTAATCAGAGGGCGACGCGAATGGCGCGGCGCTCTGATGCGGCCTGAATGGGTGGCGATTGCCA
TTTCAAAACTGTCGGCGATG

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTQPNLNIVPFVSVDHMMKLVLRVGVETFLKELAGYVEEDFRRWQNFDKTPRVASHSKEGVIELMPTSDGTLYGFKYVNG
HPKNTRDGLQTVTAFGVLADVGSGYPMLLTEMTILTALRTAATSAVAAKHLAPKNARTMAIIGNGAQSEFQALAFKAILG
VDKLRLYDLDPQATAKCIRNLQGAGFDIVACKSVEEAVEGADIITTVTADKANATILTDNMVGAGMHINAVGGDCPGKTE
LHGDILRRSDIFVEYPPQTRIEGEIQQLPEDYPVNELWEVITGRIAGRKDARQITLFDSVGFATEDFSALRYVRDKLKDT
GLYEQLDLLADPDEPRDLYGMLLRHEKLLQSESTKPAA

Sequences:

>Translated_358_residues
MTQPNLNIVPFVSVDHMMKLVLRVGVETFLKELAGYVEEDFRRWQNFDKTPRVASHSKEGVIELMPTSDGTLYGFKYVNG
HPKNTRDGLQTVTAFGVLADVGSGYPMLLTEMTILTALRTAATSAVAAKHLAPKNARTMAIIGNGAQSEFQALAFKAILG
VDKLRLYDLDPQATAKCIRNLQGAGFDIVACKSVEEAVEGADIITTVTADKANATILTDNMVGAGMHINAVGGDCPGKTE
LHGDILRRSDIFVEYPPQTRIEGEIQQLPEDYPVNELWEVITGRIAGRKDARQITLFDSVGFATEDFSALRYVRDKLKDT
GLYEQLDLLADPDEPRDLYGMLLRHEKLLQSESTKPAA
>Mature_357_residues
TQPNLNIVPFVSVDHMMKLVLRVGVETFLKELAGYVEEDFRRWQNFDKTPRVASHSKEGVIELMPTSDGTLYGFKYVNGH
PKNTRDGLQTVTAFGVLADVGSGYPMLLTEMTILTALRTAATSAVAAKHLAPKNARTMAIIGNGAQSEFQALAFKAILGV
DKLRLYDLDPQATAKCIRNLQGAGFDIVACKSVEEAVEGADIITTVTADKANATILTDNMVGAGMHINAVGGDCPGKTEL
HGDILRRSDIFVEYPPQTRIEGEIQQLPEDYPVNELWEVITGRIAGRKDARQITLFDSVGFATEDFSALRYVRDKLKDTG
LYEQLDLLADPDEPRDLYGMLLRHEKLLQSESTKPAA

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=266, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI4503065, Length=266, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24642678, Length=255, Percent_Identity=29.0196078431373, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 39332; Mature: 39201

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPNLNIVPFVSVDHMMKLVLRVGVETFLKELAGYVEEDFRRWQNFDKTPRVASHSKEG
CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VIELMPTSDGTLYGFKYVNGHPKNTRDGLQTVTAFGVLADVGSGYPMLLTEMTILTALRT
EEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AATSAVAAKHLAPKNARTMAIIGNGAQSEFQALAFKAILGVDKLRLYDLDPQATAKCIRN
HHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
LQGAGFDIVACKSVEEAVEGADIITTVTADKANATILTDNMVGAGMHINAVGGDCPGKTE
HCCCCEEEEECCCHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCCCCC
LHGDILRRSDIFVEYPPQTRIEGEIQQLPEDYPVNELWEVITGRIAGRKDARQITLFDSV
HHHHHHHCCCEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECC
GFATEDFSALRYVRDKLKDTGLYEQLDLLADPDEPRDLYGMLLRHEKLLQSESTKPAA
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TQPNLNIVPFVSVDHMMKLVLRVGVETFLKELAGYVEEDFRRWQNFDKTPRVASHSKEG
CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VIELMPTSDGTLYGFKYVNGHPKNTRDGLQTVTAFGVLADVGSGYPMLLTEMTILTALRT
EEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AATSAVAAKHLAPKNARTMAIIGNGAQSEFQALAFKAILGVDKLRLYDLDPQATAKCIRN
HHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
LQGAGFDIVACKSVEEAVEGADIITTVTADKANATILTDNMVGAGMHINAVGGDCPGKTE
HCCCCEEEEECCCHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCCCCC
LHGDILRRSDIFVEYPPQTRIEGEIQQLPEDYPVNELWEVITGRIAGRKDARQITLFDSV
HHHHHHHCCCEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECC
GFATEDFSALRYVRDKLKDTGLYEQLDLLADPDEPRDLYGMLLRHEKLLQSESTKPAA
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9375792 [H]