Click here to switch to the map view.

The map label for this gene is yddQ [C]

Identifier: 163844910

GI number: 163844910

Start: 753403

End: 754233

Strand: Reverse

Name: yddQ [C]

Synonym: BSUIS_B0776

Alternate gene names: 163844910

Gene position: 754233-753403 (Counterclockwise)

Preceding gene: 163844911

Following gene: 163844908

Centisome position: 53.84

GC content: 61.61

Gene sequence:

>831_bases
ATGAGCGGGTTGAAACGTTATTTCGCAACAGGTGAAGGCATGGCAGGCGCAGCCATTCTGGTGCTCCTGATACTGGCAGC
ACTCTGCGCACCTTTGTTCTTTCCGGGCGATCCTTTAAGCATTGTATCAACACCGCTTATGCAACCATTTGAAAATGGAG
ACTTTCTCTTCGGGACGGACAGGCTGGGCCGCGATGTGCTGGCAGAGCTTTTTTATGGTGCGCGCACCTCACTTCTCGTG
GGGCTTGCGGCGGCTTTCGCGGCAATTGTTCTGGGCAGCATAGTCGGGACGCTGGCTGGCTTTGCCGGGGGCTTCATTGA
TGAAGCCTTGATGCGTGTCGCGGAAGCATTTCAGACCGTGCCCGGTTTTCTGCTGGCGCTGGCGCTTGTAAGCATTGCAG
GTCCGTCGCTGCCGGTGCTGATCGCGGCCATTGCGCTTTCAAGCTGGACGCAGGCCACGCGGCTCACACGCGCGCAGGTG
CTTTCAATCCGTGAGAGCGACTATGTGGCCGCGGCGCGTGTTATCGGGATGCACCCGCTGGAAATCGCCTTCCGCCAGAT
TCTGCCCAACGCCCTGCCGCCGGTGCTGGCGCTGGTGCCGGTTATTGTTGCTTCGGCCATCCTGACCGAAGCGGCCTTGT
CCTTTCTGGGGTTGGGCGATCCGAACCGGGTGTCATGGGGCGGCATGATTGCCGAGGGGCGCACGGTTCTTCGCTCTGCC
CCCTGGCTTTCCATCCTGCCGGGGGCGGCGCTGGCGCTCACGGTCGTCGGCGTTTATCTGGCGGGCGAGGGATTGACCGA
GGCTATGTCCCGGCGCGAGGCGCAGCCATGA

Upstream 100 bases:

>100_bases
GTGTTATCATTACCAGTGCCCTGATGGTGATCCTTGTCAATTTCGTGATCGATCTCGTCTATCTCTGGCTCGACCCACGC
ATTGCGGCCGGGGGCAGGGC

Downstream 100 bases:

>100_bases
GCAAGCTCGTTCGTCTTGAAAAGCTTTCAGTGCGCTATGGGCGTGAAATGGCCCTGCAAAACATTGATCTCGATATTGCT
TCGGGCGAAATATTGGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSGLKRYFATGEGMAGAAILVLLILAALCAPLFFPGDPLSIVSTPLMQPFENGDFLFGTDRLGRDVLAELFYGARTSLLV
GLAAAFAAIVLGSIVGTLAGFAGGFIDEALMRVAEAFQTVPGFLLALALVSIAGPSLPVLIAAIALSSWTQATRLTRAQV
LSIRESDYVAAARVIGMHPLEIAFRQILPNALPPVLALVPVIVASAILTEAALSFLGLGDPNRVSWGGMIAEGRTVLRSA
PWLSILPGAALALTVVGVYLAGEGLTEAMSRREAQP

Sequences:

>Translated_276_residues
MSGLKRYFATGEGMAGAAILVLLILAALCAPLFFPGDPLSIVSTPLMQPFENGDFLFGTDRLGRDVLAELFYGARTSLLV
GLAAAFAAIVLGSIVGTLAGFAGGFIDEALMRVAEAFQTVPGFLLALALVSIAGPSLPVLIAAIALSSWTQATRLTRAQV
LSIRESDYVAAARVIGMHPLEIAFRQILPNALPPVLALVPVIVASAILTEAALSFLGLGDPNRVSWGGMIAEGRTVLRSA
PWLSILPGAALALTVVGVYLAGEGLTEAMSRREAQP
>Mature_275_residues
SGLKRYFATGEGMAGAAILVLLILAALCAPLFFPGDPLSIVSTPLMQPFENGDFLFGTDRLGRDVLAELFYGARTSLLVG
LAAAFAAIVLGSIVGTLAGFAGGFIDEALMRVAEAFQTVPGFLLALALVSIAGPSLPVLIAAIALSSWTQATRLTRAQVL
SIRESDYVAAARVIGMHPLEIAFRQILPNALPPVLALVPVIVASAILTEAALSFLGLGDPNRVSWGGMIAEGRTVLRSAP
WLSILPGAALALTVVGVYLAGEGLTEAMSRREAQP

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=252, Percent_Identity=35.7142857142857, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1787054, Length=267, Percent_Identity=31.4606741573034, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1787498, Length=272, Percent_Identity=33.4558823529412, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1789964, Length=278, Percent_Identity=36.6906474820144, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788505, Length=249, Percent_Identity=32.9317269076305, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=32.3770491803279, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787549, Length=274, Percent_Identity=31.021897810219, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28654; Mature: 28523

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLKRYFATGEGMAGAAILVLLILAALCAPLFFPGDPLSIVSTPLMQPFENGDFLFGTD
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECH
RLGRDVLAELFYGARTSLLVGLAAAFAAIVLGSIVGTLAGFAGGFIDEALMRVAEAFQTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PGFLLALALVSIAGPSLPVLIAAIALSSWTQATRLTRAQVLSIRESDYVAAARVIGMHPL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EIAFRQILPNALPPVLALVPVIVASAILTEAALSFLGLGDPNRVSWGGMIAEGRTVLRSA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHC
PWLSILPGAALALTVVGVYLAGEGLTEAMSRREAQP
CCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure 
SGLKRYFATGEGMAGAAILVLLILAALCAPLFFPGDPLSIVSTPLMQPFENGDFLFGTD
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECH
RLGRDVLAELFYGARTSLLVGLAAAFAAIVLGSIVGTLAGFAGGFIDEALMRVAEAFQTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PGFLLALALVSIAGPSLPVLIAAIALSSWTQATRLTRAQVLSIRESDYVAAARVIGMHPL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EIAFRQILPNALPPVLALVPVIVASAILTEAALSFLGLGDPNRVSWGGMIAEGRTVLRSA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHC
PWLSILPGAALALTVVGVYLAGEGLTEAMSRREAQP
CCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]