| Definition | Brucella suis ATCC 23445 chromosome II, complete genome. |
|---|---|
| Accession | NC_010167 |
| Length | 1,400,844 |
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The map label for this gene is 163844414
Identifier: 163844414
GI number: 163844414
Start: 216308
End: 217015
Strand: Reverse
Name: 163844414
Synonym: BSUIS_B0233
Alternate gene names: NA
Gene position: 217015-216308 (Counterclockwise)
Preceding gene: 163844415
Following gene: 163844411
Centisome position: 15.49
GC content: 58.47
Gene sequence:
>708_bases ATGGGAAAGCGCGTTCTCCATGTCGTCACCAATGTGGCCCATTATGCAGATCCGTCACAACCCACCGGCCTCTGGCTTTC GGAATTATCCCATGCCCATGATGTTTTCGCGGCAAAGGGATATGACCAGCATATTGTAAGCCCGAAAGGCGGCGTCTCGC CGCTGGAGCCGCGCGCGCTCAAATGGCCGCTTCTGGATACCTCCGCGAAAGCCTGGCTCGCCGACCCCGCCCGCATGGCG CTGCTGACAACAACAGCCAGGCCCGACCAGATCGATCCTGCCGATTACGACGCGATCTATTTTACCGGCGGACATGCCGT CATGTGGGATTTTCCCGATAGCCAGGGCCTGCAAAACATCACCCGCGCCATATGGGAACAGGGCGGCATTGTCTCCTCCG TCTGCCATGGCTATTGCGGGCTGTTGAACACCCGGCTCTCCGACGGGAGCCTGCCGGCAGCGGGAAAGCGCCTTACCGGC TTTTCATGGATGGAAGAAATCCTGGCCGGCGTCAGCAGCCGAATGCCTTATAATGCCGAACAGGAAATGAAACGGCGCGG CGCGCACTATCAAAAAGCCTTTCTGCCCTTCATTTCGTATGTCGTCGCCGATGGCCGTCTCGTAACCGGCCAAAACCCCG CCTCCGCAAAGGCCACTGCCGAAAAAGTGGTGGCGCTGATGGAAATGCGCTCTAATCCTTTGTTTTGA
Upstream 100 bases:
>100_bases CAGGGACGAATTAACTTATGGTGGCTTGACCCTGAACCTTTCTTCAATGTTATGCTTGGCACAATCCAGTGCTAACGGGC GACAGCGGAAGGTTTGAAGC
Downstream 100 bases:
>100_bases CGCGCATCTTTTCCGAAAACCGTTTCACACTTTTCGGGATGCGCTCTAAATTGTGGTCCGCCGATGCGGCCTACCCTCAT CCTGTAAAGAAGCAGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; C56 Family Peptidase; Intracellular Protease/Amidase-Like; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; NonF Protein; ThiJ Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Chaperone HchA; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Chaperone Protein HchA; Pfp1 Family Protein
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MGKRVLHVVTNVAHYADPSQPTGLWLSELSHAHDVFAAKGYDQHIVSPKGGVSPLEPRALKWPLLDTSAKAWLADPARMA LLTTTARPDQIDPADYDAIYFTGGHAVMWDFPDSQGLQNITRAIWEQGGIVSSVCHGYCGLLNTRLSDGSLPAAGKRLTG FSWMEEILAGVSSRMPYNAEQEMKRRGAHYQKAFLPFISYVVADGRLVTGQNPASAKATAEKVVALMEMRSNPLF
Sequences:
>Translated_235_residues MGKRVLHVVTNVAHYADPSQPTGLWLSELSHAHDVFAAKGYDQHIVSPKGGVSPLEPRALKWPLLDTSAKAWLADPARMA LLTTTARPDQIDPADYDAIYFTGGHAVMWDFPDSQGLQNITRAIWEQGGIVSSVCHGYCGLLNTRLSDGSLPAAGKRLTG FSWMEEILAGVSSRMPYNAEQEMKRRGAHYQKAFLPFISYVVADGRLVTGQNPASAKATAEKVVALMEMRSNPLF >Mature_234_residues GKRVLHVVTNVAHYADPSQPTGLWLSELSHAHDVFAAKGYDQHIVSPKGGVSPLEPRALKWPLLDTSAKAWLADPARMAL LTTTARPDQIDPADYDAIYFTGGHAVMWDFPDSQGLQNITRAIWEQGGIVSSVCHGYCGLLNTRLSDGSLPAAGKRLTGF SWMEEILAGVSSRMPYNAEQEMKRRGAHYQKAFLPFISYVVADGRLVTGQNPASAKATAEKVVALMEMRSNPLF
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320742, Length=237, Percent_Identity=29.957805907173, Blast_Score=103, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6324967, Length=219, Percent_Identity=26.9406392694064, Blast_Score=92, Evalue=9e-20, Organism=Saccharomyces cerevisiae, GI6324975, Length=219, Percent_Identity=26.9406392694064, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323984, Length=219, Percent_Identity=26.4840182648402, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25682; Mature: 25550
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRVLHVVTNVAHYADPSQPTGLWLSELSHAHDVFAAKGYDQHIVSPKGGVSPLEPRAL CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE KWPLLDTSAKAWLADPARMALLTTTARPDQIDPADYDAIYFTGGHAVMWDFPDSQGLQNI ECCCCCCCCHHHHCCCHHEEEEEECCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHH TRAIWEQGGIVSSVCHGYCGLLNTRLSDGSLPAAGKRLTGFSWMEEILAGVSSRMPYNAE HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH QEMKRRGAHYQKAFLPFISYVVADGRLVTGQNPASAKATAEKVVALMEMRSNPLF HHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GKRVLHVVTNVAHYADPSQPTGLWLSELSHAHDVFAAKGYDQHIVSPKGGVSPLEPRAL CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE KWPLLDTSAKAWLADPARMALLTTTARPDQIDPADYDAIYFTGGHAVMWDFPDSQGLQNI ECCCCCCCCHHHHCCCHHEEEEEECCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHH TRAIWEQGGIVSSVCHGYCGLLNTRLSDGSLPAAGKRLTGFSWMEEILAGVSSRMPYNAE HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH QEMKRRGAHYQKAFLPFISYVVADGRLVTGQNPASAKATAEKVVALMEMRSNPLF HHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA