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The map label for this gene is qseC [H]

Identifier: 163844415

GI number: 163844415

Start: 217246

End: 218586

Strand: Reverse

Name: qseC [H]

Synonym: BSUIS_B0234

Alternate gene names: 163844415

Gene position: 218586-217246 (Counterclockwise)

Preceding gene: 163844416

Following gene: 163844414

Centisome position: 15.6

GC content: 61.22

Gene sequence:

>1341_bases
ATGCGCCCGCGCAGCCTGCAATGGCGCATTTCATTATGGCTGGGGCTTGGCATTTCGATGCTCTGGGCCATCGCAGCCCT
TGTGACCGCCTCGCAGCTCAGCCGGGAAATGAATGTCGTCTTCGACAGCGCACTAGAGGAAACGGCACAGCGCATCCTGC
CGCTCGCCGTCCTCGACATCACCGAACGCGAGAGCGATGACGAGATGAACCAGCGCATGGCGACACTGCGCAAACACGAT
GAATATTTCACCTATGTTGTGCGCAACACGGCAGGCGAAGTCCTGTTGCAATCGCACAGTGCGGATCTGTCTATCTTTCC
GCCTTTCACCACCATGGGTTTCCAGACCACACCCACCCACCGCATCTATTTCGATGCAGCCTTGCAGGGTGCGGTCAATA
TTGCGGTTGCCGAGCCGCTGGGCGCGCGGCGTGGCGTGGCGATGCAGGTTCTGTGGCGACTGGCCCTGCCGCTTGGCCTC
GTCATACCATTGAGCCTCATCGGGGTGTGGGCCATCGTGCGCGTGTCCATGGCGCCGCTCTGGGCCTTTCGTTCCGATAT
CGAGGCACGGGGAAGCGGCGACCTGTCGCCCGTCACGGTCAATGACCTGCCATCGGAAGTCAGCCCCATCGCGCAAGCCG
TCAACCGCCTTATGGACAAGCTCAAGCGTGCGCTGGAGGCCGAACGTTCCTTCACTGCAAATTCGGCCCATGAACTGCGC
ACCCCGATAGCCGCAGCCCTTGCCCAAACGCAGCGGCTGATTGCTGAAACGCAGGACAAGGCCGCGCGCGATCGCGGTGA
GCAGATCGAAGCCGCCTTGCACCGCCTGTCGCGCCTTTCGGAAAAACTGATGCAGCTTGCCAAGGCCGAAGGTGGCCGCC
TTCATGCCGCCGAACCCATCGACATGGGCGTGATCCTGCGCATGGTCGTGCGGGAGCTTTCGCAACCCCACGGCAATGAA
AACCGCATCCGGCTTTCAATTCCCGACATGGCGGTCAAAATCGATATCGATGCGGATGCCTTTGCCATTCTGGCGCGCAA
TCTGATTGAAAATGCGCTGAAACATGGCCCGCATGACGAGCCGGTGGAGGTATTGCTTACCGCCAGTGGAAAACTGGTTG
TAAGCAATGGCGGCCCCGCCGTTCCGCCCGATATTCTTGAGCGGCTGTCACACCGCTTTGAGCGCGGCGCAACAAAGGCC
GAGGGCACCGGGCTCGGGCTTGCCATTGCAAAGGCCATCGCCGCTGGCACGGGCGGGACAATAGACCTTTTTTCGCCCCG
CGAAGGACGGAAGGACGGCTTTGAGGTGCGCTTCACTCCGGGTGGGCGCGTGCTGCATTAG

Upstream 100 bases:

>100_bases
ATGTGAGCCGCCTGCGCAAAAAACTCGGCCACGCGATCATCGAAACGGTTCGCGGCATTGGCTACCGGCTTGGCAATAGC
AAATCGAAAGCAGCACGATG

Downstream 100 bases:

>100_bases
AACGCGTTTCGATCTGATTGAATCAGATCGGCGCTCTAATCCTTTGTTTTGACACGCATCTTTTCCGAAAACCGTTTCAC
ACTTTTCGGGATGCGCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MRPRSLQWRISLWLGLGISMLWAIAALVTASQLSREMNVVFDSALEETAQRILPLAVLDITERESDDEMNQRMATLRKHD
EYFTYVVRNTAGEVLLQSHSADLSIFPPFTTMGFQTTPTHRIYFDAALQGAVNIAVAEPLGARRGVAMQVLWRLALPLGL
VIPLSLIGVWAIVRVSMAPLWAFRSDIEARGSGDLSPVTVNDLPSEVSPIAQAVNRLMDKLKRALEAERSFTANSAHELR
TPIAAALAQTQRLIAETQDKAARDRGEQIEAALHRLSRLSEKLMQLAKAEGGRLHAAEPIDMGVILRMVVRELSQPHGNE
NRIRLSIPDMAVKIDIDADAFAILARNLIENALKHGPHDEPVEVLLTASGKLVVSNGGPAVPPDILERLSHRFERGATKA
EGTGLGLAIAKAIAAGTGGTIDLFSPREGRKDGFEVRFTPGGRVLH

Sequences:

>Translated_446_residues
MRPRSLQWRISLWLGLGISMLWAIAALVTASQLSREMNVVFDSALEETAQRILPLAVLDITERESDDEMNQRMATLRKHD
EYFTYVVRNTAGEVLLQSHSADLSIFPPFTTMGFQTTPTHRIYFDAALQGAVNIAVAEPLGARRGVAMQVLWRLALPLGL
VIPLSLIGVWAIVRVSMAPLWAFRSDIEARGSGDLSPVTVNDLPSEVSPIAQAVNRLMDKLKRALEAERSFTANSAHELR
TPIAAALAQTQRLIAETQDKAARDRGEQIEAALHRLSRLSEKLMQLAKAEGGRLHAAEPIDMGVILRMVVRELSQPHGNE
NRIRLSIPDMAVKIDIDADAFAILARNLIENALKHGPHDEPVEVLLTASGKLVVSNGGPAVPPDILERLSHRFERGATKA
EGTGLGLAIAKAIAAGTGGTIDLFSPREGRKDGFEVRFTPGGRVLH
>Mature_446_residues
MRPRSLQWRISLWLGLGISMLWAIAALVTASQLSREMNVVFDSALEETAQRILPLAVLDITERESDDEMNQRMATLRKHD
EYFTYVVRNTAGEVLLQSHSADLSIFPPFTTMGFQTTPTHRIYFDAALQGAVNIAVAEPLGARRGVAMQVLWRLALPLGL
VIPLSLIGVWAIVRVSMAPLWAFRSDIEARGSGDLSPVTVNDLPSEVSPIAQAVNRLMDKLKRALEAERSFTANSAHELR
TPIAAALAQTQRLIAETQDKAARDRGEQIEAALHRLSRLSEKLMQLAKAEGGRLHAAEPIDMGVILRMVVRELSQPHGNE
NRIRLSIPDMAVKIDIDADAFAILARNLIENALKHGPHDEPVEVLLTASGKLVVSNGGPAVPPDILERLSHRFERGATKA
EGTGLGLAIAKAIAAGTGGTIDLFSPREGRKDGFEVRFTPGGRVLH

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=456, Percent_Identity=26.3157894736842, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1790551, Length=283, Percent_Identity=28.6219081272085, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1788279, Length=312, Percent_Identity=27.5641025641026, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1786783, Length=275, Percent_Identity=26.9090909090909, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1786600, Length=194, Percent_Identity=28.3505154639175, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1788393, Length=254, Percent_Identity=25.1968503937008, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786912, Length=241, Percent_Identity=28.6307053941909, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787894, Length=287, Percent_Identity=25.0871080139373, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1790436, Length=226, Percent_Identity=28.3185840707965, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 48734; Mature: 48734

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPRSLQWRISLWLGLGISMLWAIAALVTASQLSREMNVVFDSALEETAQRILPLAVLDI
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
TERESDDEMNQRMATLRKHDEYFTYVVRNTAGEVLLQSHSADLSIFPPFTTMGFQTTPTH
CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCEEEECCHHHCCCCCCCCC
RIYFDAALQGAVNIAVAEPLGARRGVAMQVLWRLALPLGLVIPLSLIGVWAIVRVSMAPL
EEEEHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAFRSDIEARGSGDLSPVTVNDLPSEVSPIAQAVNRLMDKLKRALEAERSFTANSAHELR
HHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
TPIAAALAQTQRLIAETQDKAARDRGEQIEAALHRLSRLSEKLMQLAKAEGGRLHAAEPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
DMGVILRMVVRELSQPHGNENRIRLSIPDMAVKIDIDADAFAILARNLIENALKHGPHDE
HHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCC
PVEVLLTASGKLVVSNGGPAVPPDILERLSHRFERGATKAEGTGLGLAIAKAIAAGTGGT
CEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCE
IDLFSPREGRKDGFEVRFTPGGRVLH
EEECCCCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MRPRSLQWRISLWLGLGISMLWAIAALVTASQLSREMNVVFDSALEETAQRILPLAVLDI
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
TERESDDEMNQRMATLRKHDEYFTYVVRNTAGEVLLQSHSADLSIFPPFTTMGFQTTPTH
CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCEEEECCHHHCCCCCCCCC
RIYFDAALQGAVNIAVAEPLGARRGVAMQVLWRLALPLGLVIPLSLIGVWAIVRVSMAPL
EEEEHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAFRSDIEARGSGDLSPVTVNDLPSEVSPIAQAVNRLMDKLKRALEAERSFTANSAHELR
HHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
TPIAAALAQTQRLIAETQDKAARDRGEQIEAALHRLSRLSEKLMQLAKAEGGRLHAAEPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
DMGVILRMVVRELSQPHGNENRIRLSIPDMAVKIDIDADAFAILARNLIENALKHGPHDE
HHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCC
PVEVLLTASGKLVVSNGGPAVPPDILERLSHRFERGATKAEGTGLGLAIAKAIAAGTGGT
CEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCE
IDLFSPREGRKDGFEVRFTPGGRVLH
EEECCCCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]