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The map label for this gene is yfhC [C]

Identifier: 163844392

GI number: 163844392

Start: 189387

End: 189860

Strand: Reverse

Name: yfhC [C]

Synonym: BSUIS_B0208

Alternate gene names: 163844392

Gene position: 189860-189387 (Counterclockwise)

Preceding gene: 163844397

Following gene: 163844385

Centisome position: 13.55

GC content: 59.49

Gene sequence:

>474_bases
ATGCGAAAAGCGGCGAGCATCACAAAGGCTAACAGCGCCACGCCGATGGATATCGCGCTTGAAGAAGCGCACGCCGCCGG
TGAACGCGGCGAAGTGCCGATCGGCGCCATTATCGTGCGCGATGGCGAAATCATCGCACGCGCGGGAAACCGCACACGAG
AGTTCAACGACGTTACCGCACATGCCGAAATACTGACAATCCGCCAAGCCGGAGAGATGCTAGGCTCGGAACGGCTGATC
GACTGCGACCTCTATGTGACGCTGGAGCCCTGCGCCATGTGCGCTGCCGCCATTTCCTTCGCCCGGATCAGGCGCCTTTA
TTATGGCGCATCCGACCCCAAGGGCGGCGGCATAGAGCATGGGGGCCGCTTTTACACGCAGCCCACATGCCATCATACCC
CCGAAATCTATCCGGGTTTTTGCGAAGCCGACGCCCGAAAAATCCTGAAGGATTTCTTCCGCGAAAAACGCTGA

Upstream 100 bases:

>100_bases
TCCGTTCGCAAATCGGTTTCGATTTCGGGAATTATGCAGTAACAAATCACTCCATGGCTTGCGAGCGAAATTTCCCGAAC
AATACACGAAATGGGACCCC

Downstream 100 bases:

>100_bases
CTATTCAGAGTATTTTCGAGCCAAAAGTCCTTCAAACTTTGGCTGGAAATGCTCTAGTTTGGCGTACCATGGCCCGTCAT
ATAGCGCAGCGTATCGTCAC

Product: hypothetical protein

Products: uracil; NH3

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRKAASITKANSATPMDIALEEAHAAGERGEVPIGAIIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLGSERLI
DCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHTPEIYPGFCEADARKILKDFFREKR

Sequences:

>Translated_157_residues
MRKAASITKANSATPMDIALEEAHAAGERGEVPIGAIIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLGSERLI
DCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHTPEIYPGFCEADARKILKDFFREKR
>Mature_157_residues
MRKAASITKANSATPMDIALEEAHAAGERGEVPIGAIIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLGSERLI
DCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHTPEIYPGFCEADARKILKDFFREKR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=163, Percent_Identity=29.4478527607362, Blast_Score=77, Evalue=9e-15,
Organism=Escherichia coli, GI145693172, Length=142, Percent_Identity=41.5492957746479, Blast_Score=107, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17554608, Length=107, Percent_Identity=37.3831775700935, Blast_Score=78, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17541138, Length=141, Percent_Identity=32.6241134751773, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6325319, Length=143, Percent_Identity=32.8671328671329, Blast_Score=65, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6322425, Length=153, Percent_Identity=31.3725490196078, Blast_Score=63, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355527, Length=145, Percent_Identity=31.7241379310345, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: 3.5.4.1

Molecular weight: Translated: 17269; Mature: 17269

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKAASITKANSATPMDIALEEAHAAGERGEVPIGAIIVRDGEIIARAGNRTREFNDVTA
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCHHH
HAEILTIRQAGEMLGSERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEH
HHHHHHHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GGRFYTQPTCHHTPEIYPGFCEADARKILKDFFREKR
CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKAASITKANSATPMDIALEEAHAAGERGEVPIGAIIVRDGEIIARAGNRTREFNDVTA
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCHHH
HAEILTIRQAGEMLGSERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEH
HHHHHHHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GGRFYTQPTCHHTPEIYPGFCEADARKILKDFFREKR
CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: cytosine; H2O

Specific reaction: cytosine + H2O = uracil + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA