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The map label for this gene is pepB2 [H]

Identifier: 162448024

GI number: 162448024

Start: 1233554

End: 1235317

Strand: Direct

Name: pepB2 [H]

Synonym: ACL_1181

Alternate gene names: 162448024

Gene position: 1233554-1235317 (Clockwise)

Preceding gene: 162448020

Following gene: 162448025

Centisome position: 82.4

GC content: 31.07

Gene sequence:

>1764_bases
ATGTCAAAATGGGATTTATCAGTCTTTTATCCAAATGATGAAGCATGGGAAAAAGATTTTAATTTATTAAAAACAGAGGT
TGCTAAATTCAGTAATTTCAAAGGGAAACTAGGGAATTTTGATGATTTCTTAGCTTATCATAAATTCGATGAAGAAGTCA
CTAAACTCTTATACAAAGTATATGCATATGCACATTTAGCATCAGATTTAAACTTAAAAGATACTAAGAAAATGCAAATG
AATCAACAAGTTGGTTTAGTGTTATCCGAGTTAAATCAATTAACTTCATTCATCTCACCAGAGATTATTGACCTAGGAAA
AGATACTGTGCTAGCATTTGTTGAAAAGGATGAATTCTTAAAACCATTTAAGTTTCCTTATGAAAAGTTATTTAGAGGTC
AAGAACATATTCTAGATGCGAAGAGTGAACAGTTAATGTCTAACTTCTCACCAATTAAGAATATCCCTACTTCTTTATAC
CAAGCATTATCTACAATTGATCGTAAAGATGAAACAATTAAGTTATCAGATGGAAGTGATGTATTAGTTACTCAAGCTCA
ATTTAGAGCATTAATTGAAGATGCTAAAACACCTGAAGATAGAAAAGCAATTTTTGAATCTTTATATAGAAAATATGTAG
ATAATAAAACAGCATTTGCTGCAACATACAACTTAGTTTTACAATCTCTATCAGCAAATAATAAAAATAGAGGTTATGCA
TCCAGTTTAGATGCAGCACTCTTTAACAATAATATTCCTACTTCAGTATTCCATAACTTAAAAGATACTGCATATGAAAA
TACACATACATTAAAACGTTATATTGAAATTAGAAAAAAAGCTTTAGGTATGGACGAGTACTTCACATATGATCGTTTCT
TACCACTTGCAAAATCCGGTAAAAAATATCCATATGATGAAGCCAAAGCACTATTCCTAGAATCTATTAAAAACTTCCCT
AAAGAATTCGTTGATAACCAAAAAGATGCAATCAAAGATGGCTTTGTAGATGCACAACCTCAAGATGGTAAACGTAGTGG
TGCTTATTCTTCTGGTATGTATGGTCATCATCCATTTATCTTATTAAATCATAATGATACATTAGATGCAGTCTTTACCC
TAGCACACGAAGCAGGACACTCAGCACACTCAATTTTCTCTGATGCTGCACAACCAATGGCTATTTCTAACTACACAATC
TTTGTTGCAGAAATTGCATCAACATTTAATGAGCATGCTCTATTAGATTACCTATTAGAAAAATCTAGTTCTAAACAAGA
AAAGATTGAATTACTATCTTTAGCAATCGATAACATTCATTCAACCTTCTACCGTCAAACTTTATTTGCTACTTATGAAT
ATGAAGCCAATAAACTTGTAAGTGAAGGGAAACCAGTCAATGAAAAAGCATTAAGCCAAATCATGATTGATTTATACCAA
CATTACTATGGTTTAGATATTACTAAAGAACCTGGTAAACAATATGTTTGGGCATATATCCCTCACTTATTCTACACACC
GTTTTACGTATACCAATATGCAACAGCATTTAGTGCTTCATTAAAGATTTATGATAATGTTAAATCCAATGAACCTAAAG
CATTTGATAACTATATTGCGATGTTAAAAACTGGTGGATCTATGTATCCAGTAGATGAAGCAAAAATTGCTGGTGCAGAT
TTAACTAAGAAAGAATCTTTCCAAGCAGTCGTTAAACGTATGGAATCTTTATTAGATCAACTAGAAGCTTTATTAAACGA
ATAA

Upstream 100 bases:

>100_bases
CGTATTCATTAAACAAATGTGCATATAATAACTTGTTTTCTTTATATTTTTGTATTTTATTGATATAATTACTATAATTT
ATTTAAGGAGCGTGGACCAT

Downstream 100 bases:

>100_bases
TCTTTATAATTGACTATTCAAACATAAAATTATACAATATGAATAAGCAATGATAAGAACAAGTAACTACTAACTTTTTA
TTTAGAGACCTATAGCTTGG

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 586

Protein sequence:

>587_residues
MSKWDLSVFYPNDEAWEKDFNLLKTEVAKFSNFKGKLGNFDDFLAYHKFDEEVTKLLYKVYAYAHLASDLNLKDTKKMQM
NQQVGLVLSELNQLTSFISPEIIDLGKDTVLAFVEKDEFLKPFKFPYEKLFRGQEHILDAKSEQLMSNFSPIKNIPTSLY
QALSTIDRKDETIKLSDGSDVLVTQAQFRALIEDAKTPEDRKAIFESLYRKYVDNKTAFAATYNLVLQSLSANNKNRGYA
SSLDAALFNNNIPTSVFHNLKDTAYENTHTLKRYIEIRKKALGMDEYFTYDRFLPLAKSGKKYPYDEAKALFLESIKNFP
KEFVDNQKDAIKDGFVDAQPQDGKRSGAYSSGMYGHHPFILLNHNDTLDAVFTLAHEAGHSAHSIFSDAAQPMAISNYTI
FVAEIASTFNEHALLDYLLEKSSSKQEKIELLSLAIDNIHSTFYRQTLFATYEYEANKLVSEGKPVNEKALSQIMIDLYQ
HYYGLDITKEPGKQYVWAYIPHLFYTPFYVYQYATAFSASLKIYDNVKSNEPKAFDNYIAMLKTGGSMYPVDEAKIAGAD
LTKKESFQAVVKRMESLLDQLEALLNE

Sequences:

>Translated_587_residues
MSKWDLSVFYPNDEAWEKDFNLLKTEVAKFSNFKGKLGNFDDFLAYHKFDEEVTKLLYKVYAYAHLASDLNLKDTKKMQM
NQQVGLVLSELNQLTSFISPEIIDLGKDTVLAFVEKDEFLKPFKFPYEKLFRGQEHILDAKSEQLMSNFSPIKNIPTSLY
QALSTIDRKDETIKLSDGSDVLVTQAQFRALIEDAKTPEDRKAIFESLYRKYVDNKTAFAATYNLVLQSLSANNKNRGYA
SSLDAALFNNNIPTSVFHNLKDTAYENTHTLKRYIEIRKKALGMDEYFTYDRFLPLAKSGKKYPYDEAKALFLESIKNFP
KEFVDNQKDAIKDGFVDAQPQDGKRSGAYSSGMYGHHPFILLNHNDTLDAVFTLAHEAGHSAHSIFSDAAQPMAISNYTI
FVAEIASTFNEHALLDYLLEKSSSKQEKIELLSLAIDNIHSTFYRQTLFATYEYEANKLVSEGKPVNEKALSQIMIDLYQ
HYYGLDITKEPGKQYVWAYIPHLFYTPFYVYQYATAFSASLKIYDNVKSNEPKAFDNYIAMLKTGGSMYPVDEAKIAGAD
LTKKESFQAVVKRMESLLDQLEALLNE
>Mature_586_residues
SKWDLSVFYPNDEAWEKDFNLLKTEVAKFSNFKGKLGNFDDFLAYHKFDEEVTKLLYKVYAYAHLASDLNLKDTKKMQMN
QQVGLVLSELNQLTSFISPEIIDLGKDTVLAFVEKDEFLKPFKFPYEKLFRGQEHILDAKSEQLMSNFSPIKNIPTSLYQ
ALSTIDRKDETIKLSDGSDVLVTQAQFRALIEDAKTPEDRKAIFESLYRKYVDNKTAFAATYNLVLQSLSANNKNRGYAS
SLDAALFNNNIPTSVFHNLKDTAYENTHTLKRYIEIRKKALGMDEYFTYDRFLPLAKSGKKYPYDEAKALFLESIKNFPK
EFVDNQKDAIKDGFVDAQPQDGKRSGAYSSGMYGHHPFILLNHNDTLDAVFTLAHEAGHSAHSIFSDAAQPMAISNYTIF
VAEIASTFNEHALLDYLLEKSSSKQEKIELLSLAIDNIHSTFYRQTLFATYEYEANKLVSEGKPVNEKALSQIMIDLYQH
YYGLDITKEPGKQYVWAYIPHLFYTPFYVYQYATAFSASLKIYDNVKSNEPKAFDNYIAMLKTGGSMYPVDEAKIAGADL
TKKESFQAVVKRMESLLDQLEALLNE

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 67132; Mature: 67000

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKWDLSVFYPNDEAWEKDFNLLKTEVAKFSNFKGKLGNFDDFLAYHKFDEEVTKLLYKV
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YAYAHLASDLNLKDTKKMQMNQQVGLVLSELNQLTSFISPEIIDLGKDTVLAFVEKDEFL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCHHHC
KPFKFPYEKLFRGQEHILDAKSEQLMSNFSPIKNIPTSLYQALSTIDRKDETIKLSDGSD
CCCCCCHHHHHCCHHHHHCCHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCEEEECCCCC
VLVTQAQFRALIEDAKTPEDRKAIFESLYRKYVDNKTAFAATYNLVLQSLSANNKNRGYA
EEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCH
SSLDAALFNNNIPTSVFHNLKDTAYENTHTLKRYIEIRKKALGMDEYFTYDRFLPLAKSG
HHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHCC
KKYPYDEAKALFLESIKNFPKEFVDNQKDAIKDGFVDAQPQDGKRSGAYSSGMYGHHPFI
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
LLNHNDTLDAVFTLAHEAGHSAHSIFSDAAQPMAISNYTIFVAEIASTFNEHALLDYLLE
EECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
KSSSKQEKIELLSLAIDNIHSTFYRQTLFATYEYEANKLVSEGKPVNEKALSQIMIDLYQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCCCCCHHHHHHHHHHHHH
HYYGLDITKEPGKQYVWAYIPHLFYTPFYVYQYATAFSASLKIYDNVKSNEPKAFDNYIA
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHH
MLKTGGSMYPVDEAKIAGADLTKKESFQAVVKRMESLLDQLEALLNE
HHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKWDLSVFYPNDEAWEKDFNLLKTEVAKFSNFKGKLGNFDDFLAYHKFDEEVTKLLYKV
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YAYAHLASDLNLKDTKKMQMNQQVGLVLSELNQLTSFISPEIIDLGKDTVLAFVEKDEFL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCHHHC
KPFKFPYEKLFRGQEHILDAKSEQLMSNFSPIKNIPTSLYQALSTIDRKDETIKLSDGSD
CCCCCCHHHHHCCHHHHHCCHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCEEEECCCCC
VLVTQAQFRALIEDAKTPEDRKAIFESLYRKYVDNKTAFAATYNLVLQSLSANNKNRGYA
EEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCH
SSLDAALFNNNIPTSVFHNLKDTAYENTHTLKRYIEIRKKALGMDEYFTYDRFLPLAKSG
HHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHCC
KKYPYDEAKALFLESIKNFPKEFVDNQKDAIKDGFVDAQPQDGKRSGAYSSGMYGHHPFI
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
LLNHNDTLDAVFTLAHEAGHSAHSIFSDAAQPMAISNYTIFVAEIASTFNEHALLDYLLE
EECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
KSSSKQEKIELLSLAIDNIHSTFYRQTLFATYEYEANKLVSEGKPVNEKALSQIMIDLYQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCCCCCHHHHHHHHHHHHH
HYYGLDITKEPGKQYVWAYIPHLFYTPFYVYQYATAFSASLKIYDNVKSNEPKAFDNYIA
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHH
MLKTGGSMYPVDEAKIAGADLTKKESFQAVVKRMESLLDQLEALLNE
HHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]